Bifidobacterium longum subsp. longum JCM 1217: BLLJ_1175
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Entry
BLLJ_1175 CDS
T01419
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
blm
Bifidobacterium longum subsp. longum JCM 1217
Brite
KEGG Orthology (KO) [BR:
blm00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BLLJ_1175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blm03021
]
BLLJ_1175
Transcription machinery [BR:
blm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BLLJ_1175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
BAJ66842
LinkDB
All DBs
Position
complement(1376061..1377485)
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AA seq
474 aa
AA seq
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MATKETTATKQTAESSEETETKKKASSTTTARKTSAKKSKSAEPSKKTTRKSAAKKTAKK
AKDDELVKDEDTQVDDELDDDAEVNDDDLDVDDLDEDLDDVDEDDADDEDLDEDDADDDD
VEDDEDEEEAKSKAPEQPKEKGAYVVSDTDDEEENIIPSGNPKRRVIAAGATADPVKDYL
KQIGRVSLLNAEQEVDLSERIEAGLYAQHLLDTESEGMEFKRKRELKWAAADGKKAKDHL
LEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDWKKGFKFSTYATWWIRQAI
TRAMADQARTIRVPVHMVEVINKLSRVQRQMLQDLGREPTPDELARELDMPVEKVQEVQK
YGREPISLHTPLGEDGDSEFGDLIEDTDAIAPSDAVAFSLLQEQFKQVLETLSPREAGVI
KMRYGLEDGQPKTLDDIGRVYGVTRERIRQIESKTMSKLRHPSRSQTLRDFLDQ
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
ttggccacgaaggaaacgacggcaaccaagcagacagccgagtccagcgaggagaccgag
accaagaagaaggccagctctacgaccaccgcacgcaagacttccgccaagaagtccaag
tccgcagagccctcgaaaaagaccacgcgcaagtccgctgcgaagaaaaccgcgaagaag
gccaaggacgatgagctcgtcaaagacgaggacactcaggtcgatgacgagcttgatgac
gatgccgaggtcaacgacgacgatttggacgttgacgacctcgacgaggatcttgacgac
gttgacgaagacgatgccgacgacgaagacctcgatgaggacgatgccgacgacgatgat
gtggaagacgacgaggacgaggaagaagccaagtccaaggcacccgagcagcccaaggaa
aagggtgcctacgtggtctccgacacggatgatgaggaagaaaacatcatcccctcgggc
aatccgaagcgtcgtgtgattgcggccggcgcaaccgccgacccggtcaaggactacctg
aagcagatcggccgtgtgagcctgctgaatgccgagcaggaagtcgacctgtccgagcgc
atcgaggccggcctgtacgcccagcacctgctcgacaccgaaagcgaaggcatggagttc
aagcgcaagcgtgaactcaagtgggccgccgccgacggcaagaaggctaaggaccatctg
ctggaagccaacctacgacttgtggtctcgctcgccaagcgctacacgggtcgcggcatg
ctcttccttgatttgatccaggaaggcaaccttggtctgattcgtgccgtcgagaagttc
gactggaagaagggcttcaagttctccacctacgccacgtggtggattcgtcaggccatc
acccgtgccatggccgatcaggcccgcaccattcgcgtgcctgtgcacatggtcgaagtg
attaacaagctgtcccgtgtacagcgccagatgctgcaggatctggggcgtgaacctacg
ccggacgagctggcccgcgagctggatatgccggttgagaaggtgcaggaagtgcagaag
tacggccgcgagccgatttccctgcacaccccgcttggcgaggatggcgattccgagttc
ggtgacctcattgaggataccgacgccatcgctccgtccgacgccgtggccttctccctg
ctgcaggaacagttcaagcaggtgctggaaaccctgtctccgcgtgaggccggcgtcatc
aagatgcgctatggcctggaagacggccagccgaagacgctggacgacatcggccgtgtg
tatggcgtgacccgtgaacgcatccgtcagatcgagtccaagaccatgtccaagctgcgc
cacccatcccgttcgcagaccctgcgcgacttcctggatcaatga
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