Bifidobacterium longum subsp. longum JCM 1217: BLLJ_1316
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Entry
BLLJ_1316 CDS
T01419
Name
(GenBank) putative ATP-dependent nuclease subunit A
Organism
blm
Bifidobacterium longum subsp. longum JCM 1217
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
BAJ66983
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Position
complement(1554473..1558588)
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AA seq
1371 aa
AA seq
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MVEHVDALPRSEDADNLSDDFPTNTMPYVISASAGTGKTTQLLQDILLDLLNRNADEAHS
SIRESLIITFTVAAAAEIRRRLEQNLQYAILYARRNHGCQPGSLVLLDTDYQLGGDDSEL
ARTILHDCHHAQTVFSVALNDLPTVQISTIDALSKRIVDRNADTLPVAPGFQILADDAMK
NRLRGQTLDALFESWYDERNSMHARFMDVLDNMQGPRHDGDLRATMMSLYDKALTKPNRI
GWLSRLAEPYRFNIASLNQVVGGEYGNEYLDRYFRGWIDMAEHPLAELRSCLDEALASCH
DAHTAQQDTVVKSLRMICDLPQYLRSESWNAVRARVIDANPLDVLPKRITVGKTAILKST
AIAVPKDSELGRRLAETVRGIKGIVSDLQSKLAFTAEQVDSLDEVAARRLEGLIALITTF
DQQYALVKQQESVAEFSDVAFWALDAMQQPDVAKRIGAQWRYIYVDECQDNNALQNRFIR
EISRNAAKLTMVGDVKQSIYGFRDASPEEFGDICNSVTDASHRRELWVNYRSVPEIITFV
NTVFARLMTPNMGATDYLKEQLQIGSAKQAGKPFDAEAIELLVSNAAPDLSADVVADENG
TDTAPTVRAGKDELQVDMIVRRVQELCEGPRAQYSYGDIAVLARGATHFADLADRLYRVG
IPVEVQGVGDLYRQPEIQIALDWLRIIANRHQDVPLVAVLRTMGFTDDDLARIRLHNRGW
LFDVMRRIAESGGEADESAVLSSDVLLAKISAFLRIYDAACDYARVHSLSDSLWHLYAVS
GLFDFAGNMPEGERRQANLRLLVEKADAFAVAQERGLQPFLDAVTMWSASGSGEEASTVP
TKNAVHIMTIHKSKGLQWPVVILMGASNNLLTGSRTAVVRTIAHQTRNEDGAVAEYGEGA
LSLVDQRNHVRVDTFQRAVIDSRAKELEAAEELRLLYVAMTRAERKLIIAGSYRPGKNDD
GNLNLRTMAQGIALSGDGRTIDPRTVVKNSGSPNYLYWILGSLLASGDADDDSSAILRPN
EVRAWNLAAGLQETAPAMAATGRAITIRFCSAAPEPTTTMNERTDGYGYINKRIDVTGLR
LPDEPPRMPVVVSSSKARSWMIDDAESISDDTDSLAVLPSDDAAAPIAMLEDNLDDWKQR
REAHSGFFIPDFMKKVSDVEPSASEVGTAVHNVLELFDWGTEPFREQCEAELRNIVDRLE
ANHVITPQVAHIVLTRELEGLLWFVTGENCPLSAQIRAHRDTLFREEPFSMLIERNRLNA
KVNGSGMAGGVPNTKNDSGNVAEQCDDTIVVRGIIDGYFLDPTAKTITLFDYKTDKMRPG
ETVKDWSQRLRTEYAQQQALYAEALEHRYSGYAVVRRWLVGLIGHRIIHIS
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atggtagaacatgttgatgcattacctaggtcggaagatgcggataatctctcggacgat
tttccgacaaacaccatgccttacgtcatcagcgcatccgcaggcaccggcaaaaccact
caactcttgcaggatattctgctggacttgctgaaccgtaatgcagacgaagcgcattca
tccatccgcgaatcgttaattattactttcaccgttgccgcagccgcagaaattcgccgg
cgcttggaacagaacctgcagtacgccattctgtatgcgcggcgcaatcatggatgccag
ccgggttcactcgtgctcttggatacggactatcaattaggtggagacgacagcgaactg
gcgcgtacgattctgcacgattgccaccatgcgcaaaccgtattctccgttgccttgaac
gatctgccaaccgtgcaaatcagcactattgatgcgctctccaaaagaatcgtggatcgc
aatgccgatacattgccggtggctccaggattccagattcttgctgatgatgccatgaag
aaccggctgagaggccaaacactcgacgcgttattcgaatcgtggtatgacgagcgcaac
tcaatgcacgcgcggttcatggatgtgttggacaacatgcaagggccccggcatgatggt
gacttgcgcgccaccatgatgagcctgtatgacaaggcactcaccaagcccaaccgcatc
ggttggcttagccggctcgccgaaccataccggttcaacattgcgtcgctgaatcaggtc
gttggtggtgaatacggcaatgaatatttggaccgttattttcgaggctggattgatatg
gcagaacatcctcttgccgaattgcgatcgtgtcttgatgaggcgctcgccagctgccac
gatgcgcacaccgcgcagcaagatacggtagtcaaatcattgcggatgatatgcgatttg
cctcagtacttgcgtagcgaatcatggaatgcagttcgtgctcgtgttatcgatgccaat
ccattggacgtactgcccaagcgcattactgtcggcaaaactgccattcttaagagtacg
gcaatcgccgtacccaaagacagtgaactgggccgtcgcttggcggaaacggtgcggggc
attaaagggatcgtttctgatttgcaatcgaaactggcctttaccgctgaacaagtggac
tcgcttgatgaggtcgctgcgcgaagactcgaaggattgattgcgctcatcaccacgttc
gaccagcagtatgcgcttgtgaaacagcaggagtccgtagcggagttcagtgatgtggct
ttctgggcattggatgccatgcagcagcctgacgtggccaagcgtatcggtgctcagtgg
cgatatatttatgtggatgaatgccaggataataacgccctgcagaatcgattcattcgc
gaaatcagccgaaatgcagccaaacttaccatggtcggtgatgtgaagcaaagcatttat
gggttccgtgatgcctcgccggaggagttcggcgatatctgcaatagtgttacggatgcg
agccatcgccgggaattgtgggtgaactatcgatcggtgccggaaatcatcacttttgtg
aatacggtatttgcccgactgatgacgccgaatatgggtgcgaccgattacctgaaggaa
cagttgcaaatcggctcggcaaagcaagccggtaaaccattcgatgcagaagccattgaa
ttgttggtgagtaacgcggcacctgacttgagtgctgatgttgtggctgatgaaaacggc
actgacactgcaccgacagttcgcgccggcaaggacgaattacaggtggacatgatagtg
cgccgtgtccaggagctctgcgaggggcctcgcgcgcagtattcatatggggatatcgcg
gtgctggctcgtggcgctactcattttgccgacctggctgaccgactatatcgtgtcggc
attccagtcgaagtacagggcgttggagacctgtatcgtcagccggagatacagatcgcc
ttggattggttgcgtattatcgccaatcgtcatcaggatgtgccgttggttgcggtgcta
cggactatggggttcacggatgatgatttggcgcggattcgtctgcataacagaggctgg
ctatttgacgttatgcggcggattgctgagagtgggggagaagctgatgaatcggctgtt
ctttcttctgatgtgttgcttgcaaagatatcggcattcctgcgaatctatgatgccgca
tgcgattatgcgcgagttcactctctgtctgattcgttgtggcatctctatgccgtttct
ggcttgttcgatttcgcaggcaatatgcctgaaggtgagcgacggcaggcgaacctgcgc
ttgcttgtagaaaaggctgatgcatttgctgtagctcaggagcgtggattgcaaccattc
cttgatgccgtaacaatgtggtccgcgagtggctccggtgaagaagcttcaacagtgcct
accaaaaacgccgtgcatatcatgacgattcataaatccaagggattgcaatggcccgtc
gtgatactcatgggtgccagcaataatctgctgaccggatcgagaaccgctgtcgttcgc
acgattgctcatcagacaaggaatgaggatggggctgttgccgaatatggcgaaggtgcc
ttatcgttggttgaccaacgtaaccatgttcgagtggatactttccagcgcgcagtgatt
gattcgcgggccaaggagttggaggcggcagaggaacttcgtttgctctatgtggcgatg
actcgtgccgaacgcaagttgattatcgcgggatcgtaccgtccaggaaagaacgatgat
ggcaatctgaatttgcgtacgatggctcaaggcatcgcgctaagcggcgatggacgcacc
atagatccacgaacggtggtcaagaatagtggtagccccaattatctctattggattcta
ggatcattgctggcgtctggagatgcggatgatgattcgtctgcgattcttcgccctaat
gaggtccgtgcgtggaatcttgctgcgggactacaggaaacagcgccggctatggcggcg
acgggcagggccattacgattcgattctgcagtgctgcgcctgagccgacgaccactatg
aatgagcgaacggacgggtatggctatatcaataaacgtattgatgtgactggtttgcga
ttgcctgatgagcctccgcgcatgccagtggtagtgagttcctccaaggctcgcagctgg
atgattgatgatgcggaatctatatctgatgacactgattcgctggctgtattgccgtct
gatgacgcggctgcgccaattgccatgctggaagacaatctagatgattggaagcaaagg
cgggaagcgcatagtgggttctttattcctgactttatgaagaaggtatccgacgttgag
ccatctgcttcggaggtgggtactgcggtccacaatgtactggaactctttgattggggt
actgagccgttccgtgagcagtgcgaagccgagctgagaaacattgttgaccgtctggaa
gcgaatcatgtcatcacgccgcaagtggctcatattgtgctgactcgcgagctggaaggc
ttgctctggtttgtcactggagaaaattgcccgctatcggcgcaaatacgagctcatcgg
gatactctgttccgggaagagccattctcgatgttgattgaacgtaaccggcttaatgcc
aaggtgaacggtagcggcatggctggtggcgtgcccaacacgaagaatgacagcggcaac
gttgctgagcaatgtgacgacacaatcgtggtccgaggtatcatagacggctatttcctt
gatccaaccgccaagaccatcaccctcttcgactacaaaaccgacaaaatgcgcccgggt
gaaacagtcaaagactggtctcagcgtctccgcaccgaatacgctcaacaacaagctctc
tacgccgaggccctagaacatcgctattctggatatgctgtagtacggcgatggcttgta
gggctcattggacacaggattattcacatttcgtga
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