Bifidobacterium longum subsp. longum JCM 1217: BLLJ_1524
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Entry
BLLJ_1524 CDS
T01419
Name
(GenBank) putative helicase
Organism
blm
Bifidobacterium longum subsp. longum JCM 1217
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SNF2_assoc
Helicase_C
ERCC3_RAD25_C
SWIM
DUF7117
DUF4018
Motif
Other DBs
NCBI-ProteinID:
BAJ67191
LinkDB
All DBs
Position
complement(1820946..1825130)
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AA seq
1394 aa
AA seq
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MSKGYGVFGHVPDNADDDGLLPYEDDDSGVSWGHALRRRNPWKRGDDEDADYDDGRYDID
DTDDTNGGRGIYAGKSGGVGGISGETGGILGSSGAAGSRDVTFGGTDSLSAADAVMPYRF
RQGRSVWFDDEDEGHFAGSAKRAEAHAVPILALRNDVESSSSNAVLARARSIARKAATMV
INPVYSENHRTGYAELDGILRGTTSPSSRYRTSVQFDLDTGEAVGGKCSCPAYGRGYGMC
KHMIALAFIFCDDPQRFEGYRAGAARPSRTLIDYMEHADRQDAQAKIRRRNAVMRRFDAT
QGKNGANARRTKSGYGSRAGTRGGGYQGDSETVGLGQVQLVPILSFIDGVWSVEFKIGSA
SNGSSYVLKSIPQFVLAMANGDYADYGQKLAFIHTPDMLDDDSRPLLDVLDDAMAVRRAA
EQQDRYYGHIAIDRHLTLSAPEVARLLSVREGRGVQLVLNTWFSGQPASVPVDGGEPDFL
MRIARRDFNTYGPDAGYLLTGVPAVETVIDGGKNVWLLLASTNPAGAVSAMVAGSQRKSA
AGCRFVRCPKRLIPLRGLLGDLFEPDGEGQVIAGDDIALFARTLLPQLVGAGLLEASEIP
RELAELSPTECSLQFYLDRDEHGVQCEVKARYGDAIVPLLPDGPTVHAEGERSIPLSRGV
IGRDFDAEHLAIDVVREFFTMPDQRKRVAAATHQTVNGFRTPAARKATKKFVSDAATIDR
DDTTQIVRLFDEGLPALKEVGEVFTTPAFDRLIAPKPPSVKVGLSIKGNLVEISPLADEV
PPDEVGALLSSYRRRQRFHQLKDGTLVKLSGANLSTLDRLASDLDLSEQQLNSGLIELPG
GRAFLLDGELPDDGSDVVKDASFTEYIDDLKIIDPKSYEVPDSLKHILRPYQVEGFQWLN
TLCDKGFGGILADEMGLGKSVQLIALLLSRYQRNTGEMGDGSLGPSLIVCPASLVYNWGA
EFTKFAPSFNAVVVAGTKAERRTAIGRAFRADEPTVLITSYDLLRRDVDDYTANEQRFNV
MALDEAQYIKNHTTKIAKAVKAVAADHRFALTGTPIENRLSELWSIFDFLMPGLLGSYKR
FHERYELPISNARAADGSTAEGRAAAQVNPEAARVSRQLQSLVGVFIKRRLKSQVLTDLP
DKLETTLTVRLAGEQRKLYAAHEQRLRMQLEHSEEADFNTSKIRILAELTKLRQICCDPR
LLYADAKDQSAKLAAITELVETCVNEGKKALIFSQFTSFLDLIAERFDAQGLRYYTITGS
TPKKKRLELVDQFNADDTPAFLISLKAGNTGLNLTGASVVIHADPWWNAAAQDQATDRAH
RIGQTEDVNVYQVVAKDTIEERILELQHTKSELARQFTDASLLADEAGTGASALTEAPAS
IATLTKDDLLNLLG
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagggtatggtgtgtttggccatgttcccgataatgcggatgacgatggcctc
ctgccttatgaggatgatgattccggcgtttcctggggccatgcgttgcgtcgtcgcaat
ccttggaaaagaggagacgacgaagatgccgattacgacgacggtcggtatgacatagat
gacactgatgacactaatgggggcaggggcatctatgccggtaaaagcggcggagtaggc
ggcatttctggtgagacgggtggaatacttggtagctcaggcgcggccggcagcagagac
gtaacgtttggtggaacggacagtttgtccgccgccgatgcggtgatgccctatcgtttc
aggcaaggacgttccgtatggttcgacgatgaggacgaaggccatttcgccgggtctgcg
aagcgtgccgaagcccatgccgtccctatccttgcgttacgcaacgatgtggaatcgtca
tcgtcgaatgccgtgctcgctcgtgcccgtagcattgcgcgcaaagcggccaccatggtt
atcaatccggtatacagcgaaaatcatcgaaccgggtatgccgagcttgacggtattcta
cgtggcaccaccagcccatcgagtaggtatcgtaccagcgtgcaattcgacctcgatacg
ggagaagccgtcggcggcaagtgctcatgcccggcttacggccgtggctatggcatgtgc
aagcacatgattgcgctcgccttcatattctgcgatgatccgcagcgttttgaaggctac
cgtgccggggccgcacgaccgtctcggacgctgattgactatatggagcacgccgatagg
caagacgctcaagccaaaattcgtcgtcgcaatgcggttatgcgtcggtttgatgccacg
caagggaaaaacggtgcaaatgctcggcgtacaaaaagcggatacggctctcgtgccggc
acccgaggcggcgggtatcagggtgacagcgagactgtgggcttggggcaggtgcagctt
gtcccgatattgagtttcatcgacggcgtgtggagcgtggagttcaagatcggctcggct
tccaatgggtccagctatgtgctgaaatcgattccgcaatttgtgcttgccatggcgaac
ggcgactatgcggattatgggcagaagcttgcctttattcatacgccggatatgctcgat
gatgattcgcgccccctgctggacgtccttgatgatgcgatggccgtgcgtcgtgcggcc
gagcagcaggacaggtattacgggcatatcgccatcgaccgtcatctgacgctttcagca
ccggaagtggcccggttgctgtccgtacgtgagggcagaggcgtacagctcgtgctgaac
acatggttctccgggcagcctgcatcggtgccagttgatggtggcgagccagattttctc
atgcgcattgcgcggcgtgatttcaatacgtatggtccggatgccggatacctgcttacc
ggagtgccagcggtggaaaccgtgattgacggcggcaagaatgtatggctgttgctcgcc
tccactaatccggccggtgcggtatccgccatggtggcgggctctcagcgtaaaagcgca
gcaggatgccgattcgtccgttgcccgaaacgattgattccgttgcgaggactattggga
gacctgtttgaacccgatggcgagggacaggtcattgccggcgatgacatcgccctattc
gcacgcacgctattgcctcagctggttggtgccggactgttggaggccagtgagattcct
cgcgagctggctgaattaagtcctacggaatgcagcctccagttttatctggatcgtgat
gagcatggtgtgcaatgcgaggtcaaggcacgctacggcgatgccattgtcccgttgcta
cccgatggcccgacggtgcatgctgagggcgagcgttccatccccttgtctcggggcgtg
attgggcgtgatttcgacgctgagcatcttgcgattgatgtagtgcgtgaattctttacc
atgcctgaccagcgcaagcgcgttgcggccgccactcatcagacggtgaatgggttccga
acgccggccgcgcgaaaggccaccaaaaaattcgtgtctgatgcggccactatcgatcgc
gatgacaccacgcagatcgttcgtctctttgacgagggattgccggcactaaaggaagtg
ggggaggtcttcaccacaccggcttttgaccggctgatcgcgcccaagccaccaagcgtc
aaagtcggattgtccatcaaaggcaacttggtggagatatcacccctcgctgatgaagtg
ccgccggacgaagtgggtgccttgctatcttcgtaccgtcggcgtcaacgattccatcag
ttgaaggacggcacgcttgtcaaactcagcggcgcgaatctcagcacgttggaccgattg
gccagcgacctcgatctgagcgagcagcagctcaactccggactgatcgagttgccgggc
ggtcgagcattcctactggatggtgagctgccggatgacggctccgatgtagtcaaggac
gcttcgttcaccgaatacatcgacgatctcaagatcatcgaccctaagtcgtatgaagtg
ccggatagtctcaagcatattctgcgcccttatcaggtcgaaggctttcaatggctgaac
acgttgtgcgacaagggttttggcggcattctggccgatgagatgggcttgggtaaatcc
gtgcagcttatcgcgttgctcctgtctcgatatcagcggaataccggcgagatgggcgac
ggcagccttggcccatcgctgatcgtgtgcccggcgtccttggtgtacaactggggtgcc
gaattcaccaagttcgccccgagcttcaatgccgtggtggtggccggtaccaaagccgag
cgccgtaccgccatcggccgtgcgttccgggcggatgaacccaccgtgctcatcacctca
tacgacctgctgcgccgagatgtcgatgattacaccgccaatgagcaacgtttcaatgtc
atggcattggatgaagcccagtacatcaagaatcacaccacgaaaatagccaaagcggtc
aaggccgtggccgccgaccatcgtttcgccttgactggcacgccgatcgaaaaccgactc
tccgaactatggagcattttcgacttcctgatgccggggctgctcggctcatataagcga
ttccatgagcgttatgagttgcccatctccaatgcccgggccgcggatggcagcacggct
gaaggtcgggccgccgcacaagtcaatcctgaggccgctcgggtatctcgccaattgcag
tcgttggtgggcgtgttcatcaagcgcaggctgaagtcccaggtgttgaccgatttgccg
gacaagctagagaccacgctgaccgtgcggcttgccggcgaacagcgcaaactgtatgcg
gctcacgagcagcggctcagaatgcagctcgaacacagcgaagaagccgatttcaacacg
tcgaagattcgcatcctcgccgagttgaccaagttgcgccagatctgctgcgatccgagg
ctgctgtacgccgatgccaaggatcaatcggccaagcttgccgccatcaccgaactggtg
gaaacctgtgtgaacgaaggcaagaaggcgctgatcttctcccagttcaccagcttcctt
gatctgatcgccgaacgtttcgacgcgcaaggcctgcgctactacaccatcaccggctcc
acgcccaagaagaagcgtctcgaactcgtcgaccagttcaatgcggacgatacgcctgcc
ttcctgatttccctgaaggccggcaacaccggactgaacctgaccggtgccagcgtggtc
atccacgccgacccatggtggaacgccgccgcacaggatcaggccaccgaccgagcacat
cgtatcggccagaccgaagacgtcaacgtgtatcaggtggtggccaaggacaccatcgaa
gaacgtatcttggagcttcagcatactaagagcgagctcgcccgccagttcaccgacgct
tccttgcttgccgacgaagccggcaccggcgccagcgccctcaccgaagcccccgcctcc
atcgccaccctcaccaaggacgatctcctcaatctgctggggtga
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