Bifidobacterium longum subsp. longum JCM 1217: BLLJ_1537
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Entry
BLLJ_1537 CDS
T01419
Name
(GenBank) putative helicase
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
blm
Bifidobacterium longum subsp. longum JCM 1217
Brite
KEGG Orthology (KO) [BR:
blm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blm03032
]
BLLJ_1537
03029 Mitochondrial biogenesis [BR:
blm03029
]
BLLJ_1537
Enzymes [BR:
blm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BLLJ_1537
DNA replication proteins [BR:
blm03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
BLLJ_1537
Mitochondrial biogenesis [BR:
blm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
BLLJ_1537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
AAA_22
Pif1_2B_dom
AAA_16
Viral_helicase1
DEAD
nSTAND3
AAA_5
TrwB_AAD_bind
SH3_13
NTPase_1
AAA
MeaB
SLFN-g3_helicase
IstB_IS21
Herpes_Helicase
AAA_14
cobW
AAA_24
KdpD
ABC_tran
NAT10_TcmA_helicase
Zeta_toxin
AAA_7
AAA_25
TsaE
AAA_18
Motif
Other DBs
NCBI-ProteinID:
BAJ67204
LinkDB
All DBs
Position
complement(1840317..1841735)
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AA seq
472 aa
AA seq
DB search
MRQTEALAILNAGANVFLTGAPGAGKTYVLNEFIRQARADGASVAVTASTGIASTHINGQ
TIHSWSGVGVATALSASLLKLIKSRRKRKIQATDILVIDEVSMLHAWLFDMVDQVCREVR
RDPRPFGGIQVVLSGDFFQLPPVSVSGRNRDLIAPTPEFIASRERYARAGLNPEGFITES
LVWPELNPVICYLTEQHRQDTGELLTVLTDIREGDVTQSDRDVLVTRLGKLPEPGQVAVH
LFPVNRQADNLNDMRLNQIMLDPHEFHAETAGPANLVDRLKKNMLAPERLILKEGAAVMA
LRNDTDRQYVNGSLGTVRGFAQENKGGWPIVEFENGNIVTMKQATWEMMDGDTVLASVFQ
VPLRCAWGITIHKSQGMTLDRAVMDLKRTFAPGMGYVALSRVESLGGLYLAGVNERMFLV
SPDAVVLDGDLREASAAASDQLADEGANAFKPAEPDEFGANPDDDFAQDALF
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaaaccgaagccctggccattctgaacgccggcgcgaacgtgttcctgaccggt
gcgcccggtgccggtaagacctatgtcttgaacgagttcatccgccaggctcgggccgac
ggcgccagtgtagcagtcaccgcgtccacaggcatcgcctccacgcatatcaacggccaa
accattcattcgtggagcggcgtcggcgtggccaccgccctgagcgccagcctgctcaaa
ctcatcaaatcccggcgcaaacgcaagattcaggccacggacatcctcgtcattgacgag
gtttccatgctgcacgcttggctgttcgacatggtcgaccaagtctgccgcgaagtacgc
cgtgatccacgcccgttcggtggcatccaggttgtcttgtccggcgacttcttccagctg
ccgccggtttcggtgtccgggcgcaaccgcgacctcatcgcccccacgcccgaattcatc
gccagtcgcgaacggtatgcccgtgccggcttgaaccccgaaggcttcatcaccgaatcg
ctggtatggcccgaactcaacccggtgatctgctatctgaccgaacagcaccgtcaggat
accggcgaactgctgaccgtgctcaccgacattcgcgaaggcgacgtgacccagtccgac
cgtgacgtgctcgtcactcgtctgggcaaactgcccgagcccggccaggtcgccgtccac
ctgttcccggtgaaccggcaggccgacaatctcaacgacatgcgcctgaaccagatcatg
cttgatccacacgagttccacgccgagacagcaggccctgccaacctggtcgaccgactc
aaaaagaacatgttggcccccgagcgattgatactcaaggaaggcgcggctgtcatggcc
ctgcgcaacgacaccgatcgccagtacgtcaacggctcgctcggcaccgtgcgtggcttc
gcacaggagaacaagggcggctggccgatcgtggaattcgagaacggcaacatcgtcacc
atgaaacaggccacatgggagatgatggacggcgacaccgtgctcgcctccgtcttccag
gtgccgttgcgctgcgcgtggggcatcaccatccacaagtcgcaaggcatgacgcttgac
cgtgcggtcatggacctgaagcgcaccttcgcgccaggcatgggatatgtggcgctgtcc
cgagtcgaatcgctgggcggcctctatttggccggcgtcaacgaacgcatgttcctcgtc
tcgcccgatgccgtggtgctcgacggcgacctgcgcgaagcctcggccgcggcctccgac
cagttggccgatgaaggtgcaaacgcgttcaaacccgccgagccggacgaattcggtgcc
aatcccgacgatgacttcgcccaggacgcgttgttctga
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