Bifidobacterium longum subsp. longum JCM 1217: BLLJ_1642
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Entry
BLLJ_1642 CDS
T01419
Name
(GenBank) DNA repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
blm
Bifidobacterium longum subsp. longum JCM 1217
Brite
KEGG Orthology (KO) [BR:
blm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blm03400
]
BLLJ_1642
DNA repair and recombination proteins [BR:
blm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BLLJ_1642
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_25
Zn_ribbon_LapB
ATPase
DnaB_C
Lon_C
ChlI
ABC_tran
DUF7125
Rad51
SLFN-g3_helicase
AAA_16
EAD2
nSTAND_NTPase5
AAA_22
AAA_29
Isochorismatase
RsgA_GTPase
NACHT
NTPase_1
nSTAND3
VVA0879
Motif
Other DBs
NCBI-ProteinID:
BAJ67309
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Position
1960101..1961639
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AA seq
512 aa
AA seq
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MAKSSVQYVCSECGWNGPKWYGRCPECGQWGTVEEFHEARPAAGSRTAAPGRTSRTQSVT
VANNARSAARPITEVGTESVERLGTGFSEFDRVLGGGVVPGSVTLIAGEPGIGKSTLLLQ
TAGNIARVVAGDSTFRGAGQRSAQQSGRAQGNASNTVPMRGNASSTHANTVLYISGEESQ
AQVRLRASRINAVEPNLLLASTTDLSTVLGLIEQNKPALAIVDSAQTIVSQEVDGISGGS
TQVREVASALIDTAKTLDIPVFLVGHVTKDGSIAGPRTLEHLVDVVCQFEGDSETALRML
RAVKNRFGPTDEVGCFDMSGEGIEEVTDPAGLFLSGDGPDAANAAPVEGTCVTFTLDGHR
SLPIEVQALVTTSVLPTPRRAVNGVDPSRIAMLVAVLYRHSKLNLLSNDLYISTIAGGQA
KEPGSDLAIVAALASAATSKPIARATCAIGEISLTGQVRPVPRMEYRLREAARLGFTTAV
IPPLRKPVHVEGLQLVESNTLSDALDALGVRK
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatcaagtgtgcagtatgtatgttccgaatgcggttggaacgggccgaagtgg
tacggccgttgccccgagtgtggtcagtggggcacggtcgaggaatttcacgaggctcgg
ccggcggcaggctctcgcacggccgctcccggccgaacatcacgcacgcagtcggttacg
gttgccaacaacgccagatctgcagcccgtccgattaccgaagtgggcacggaaagcgtc
gagcggctcggtaccgggttttccgaattcgaccgtgtgctcggcggtggcgtggtgccg
ggttcagtaacgctgatagcgggcgaaccgggtatcggcaagtcgacattgctgttgcag
acggccggcaatatcgcgcgcgttgtggcgggagacagtacgttccgaggggcaggtcag
cggtctgcccaacagtcgggccgggcgcagggcaacgcatcgaacacggtgccgatgcgg
ggcaacgcatcatcaacacacgccaacaccgtgctgtacatttccggcgaggaatcacag
gcgcaggttcgtttgcgcgcttcccgcatcaatgcggtggagccgaacttgttactggcc
tccaccaccgacctgtccacagtattggggctgatcgaacagaacaagccggccttggcc
attgtggattcggcgcagaccatcgtctcgcaggaggtcgatggcatttccggcggttcg
actcaggtgcgcgaagtggcaagcgcgctgatagataccgctaagacacttgacattcca
gtatttctggttggtcatgtgaccaaggatggttcgattgcaggcccgcgcacattggag
catctggtcgatgtggtctgccaattcgaaggcgacagcgagactgcgctgagaatgctg
cgagcggtgaagaatcgttttggcccgaccgatgaagtcggctgtttcgacatgagcggt
gaaggcatcgaagaggtcaccgatcccgccggattgttcctgtctggagacggccctgat
gcggccaacgcggcacccgtggaaggcacctgcgtgacgttcacattggatgggcatcgc
agtctgcctatcgaagtacaggctctggtcaccacgtcggtgctgcccacaccccgtcgt
gcggtcaatggcgtggaccccagccgtatcgccatgctggtcgcggtgctctaccgtcac
agcaagctcaacctgctgtccaacgacctgtatatctccactattgccgggggccaggcc
aaggagcccggttccgacttggcgatagtggcggcactggcgagcgccgccacgtcaaaa
cccattgcgcgagccacgtgcgccattggtgagatttccctgaccggtcaggtgcgcccg
gtaccgcgtatggaatatcgccttcgcgaggccgcacgcctcggcttcaccacggcggtc
attccgccactgcgcaagccggtgcatgtcgagggacttcagctggtggagtccaacaca
ttgtccgacgcattagacgccttgggagtgcgtaaatag
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