Bifidobacterium longum subsp. longum JCM 1217: BLLJ_1715
Help
Entry
BLLJ_1715 CDS
T01419
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
blm
Bifidobacterium longum subsp. longum JCM 1217
Pathway
blm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BLLJ_1715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blm03019
]
BLLJ_1715
03016 Transfer RNA biogenesis [BR:
blm03016
]
BLLJ_1715
Enzymes [BR:
blm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BLLJ_1715
Messenger RNA biogenesis [BR:
blm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BLLJ_1715
Transfer RNA biogenesis [BR:
blm03016
]
Prokaryotic type
tRNA degradation factors
BLLJ_1715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH_2
PCB_OB
DUF1773
S1_2
Motif
Other DBs
NCBI-ProteinID:
BAJ67382
LinkDB
All DBs
Position
complement(2034091..2036832)
Genome browser
AA seq
913 aa
AA seq
DB search
MEGPEIKAVEAVIDNGSFGKRTLRFETGRLAQQADGAVAAYLDDDSMILSTTTAGSSPKE
NYDFFPLTVDVEEKMYAAGKIPGSFFRREGRPSSEAILACRIIDRPLRPLFPHTLRNEVQ
VVETVLAVNPDDAYDVIALNAASASTMISGLPFEGPVSGVRLALIDGQWVAFPRWSERER
AVFEIVVAGRVIENGDVAIAMIEAGAGKNAWHLIYDEGQTKPDEEVVAGGLEAAKPFIKV
ICEAQDELKKIAAKETKEFQLFPEYTDELYARIDEIAHKDLDEALSIAEKLPRQDRIHEI
KEHVREVLANEFTDMDDAEKDKELGNAFKELQRQIVRRRILTEDYRIDGRGLRDIRTLSA
EVDIVPRVHGSALFQRGETQILGVTTLNMLKMEQQIDALSGPQSKRYMHNYEMPPYSTGE
TGRVGSPKRREIGHGALAEKALVPVLPSREEFPYAIRQVSEAIGSNGSTSMGSVCASTLS
LLAAGVPLKAPVAGIAMGLVSGDVDGKHIFKTLTDILGAEDAFGDMDFKVAGTSEFITAL
QLDTKLDGIPADILAAALQQAKEARATILEVINECIDGPAEMSEFAPRIITTTVPVEKIG
EVIGPKGKMINQIQEDTGAEIAIEDDGTVFISSEGGEAAKKAKSIIDSIANPHVPEAGET
YNGKVVKTTSFGAFVNLTPGTDGLLHISQIRNLANGERIDAVEDVLKEGDTVEVIVQGVD
DRGKISLAIPGFEDQENNARPSRGDRDDRRGGRGRGDRDDRRGGRGRRSDRDDRDFDDRD
DRPRRRRSDDFEDDYDDRPRRRRSDDRDFDRDDRDDDRPRRRRSADRDFDDRDDRDARDS
RDDDRPRRRRSSDRDDRGDRDDRRGGSRGRGRGSDRNPRYATDDNYDDYRADREERTERP
RRRVRRDFDPFED
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcccgaaatcaaggccgttgaggccgtaatcgacaatggatcgtttggcaag
cgcacgctgcgcttcgagaccggccgcctcgcccagcaggccgatggcgctgtggccgcc
tacctcgacgacgattccatgattctgtccaccaccaccgccggttccagcccgaaggag
aactacgacttcttcccgctgaccgttgatgttgaagagaagatgtacgctgccggcaag
attccgggctcgttcttccgccgtgaaggccgcccgagctccgaggccatcctcgcctgc
cgcatcatcgaccgcccgctgcgcccgctgttcccgcacaccctgcgcaacgaagtgcag
gtcgtcgagaccgtgctcgccgtgaaccctgatgacgcttacgatgtcatcgccctgaac
gccgcttccgcctccactatgatctccggcctgccgttcgaaggcccggtctccggtgtg
cgtctggcgctgatcgacggccagtgggtcgccttcccgcgttggagtgagcgtgagcgc
gccgtgttcgagattgtggtcgctggccgcgtgatcgagaacggtgatgttgccatcgcc
atgatcgaggcgggtgccggcaagaacgcctggcacctcatctatgacgagggtcagacc
aagcccgatgaggaggtcgtggccggtggtcttgaagccgccaagccgttcatcaaggtg
atctgcgaggctcaggatgagctcaagaagatcgccgccaaggagaccaaggaattccag
ctcttcccggagtacaccgacgagctgtatgcccgtatcgacgagatcgctcacaaggat
ctggacgaggcgctctccatcgccgagaagctgccgcgtcaggatcgcatccatgagatc
aaggagcacgtgcgcgaggtgctcgcgaacgagttcaccgatatggacgacgccgagaag
gacaaggagctgggcaacgccttcaaggagctgcagcgccagatcgtgcgccgccgcatc
ctgaccgaggactaccgcatcgacggccgtggcctgcgcgacatccgcaccctgtccgcc
gaggtggacattgtgcctcgcgtgcacggctccgccctgttccagcgtggcgagacccag
attctgggcgtcaccaccctgaacatgctcaagatggagcagcagatcgacgcgctgtcc
ggtccgcagtccaagcgctacatgcacaactacgagatgccgccgtactccactggcgag
accggccgcgtcggctccccgaagcgtcgtgagatcggccacggcgccctcgccgagaag
gctctcgtgccggtgctgccgagccgtgaagagttcccctacgccatccgccaggtctcc
gaggccatcggttccaacggttccacttcgatgggttccgtgtgcgcctccacgctgagc
cttttggctgccggcgtgccgctgaaggccccggttgccggcatcgccatgggcctcgtg
tccggcgacgttgatggcaagcacatcttcaagaccctcaccgatatcctgggtgccgag
gatgccttcggcgacatggacttcaaggtggccggtacttccgagttcatcactgccctg
cagctcgacaccaagctcgacggcatccccgccgacatcctggccgccgctttgcagcag
gccaaggaagcccgcgccacgattctcgaggtcattaacgagtgcatcgacggcccggct
gagatgagcgagttcgctccgcgcatcatcaccaccaccgttccggtcgagaagatcggc
gaggtcatcggcccgaagggcaagatgatcaaccagattcaggaagataccggcgctgaa
attgccatcgaggatgacggtaccgtcttcatctcctccgagggtggcgaggccgctaag
aaggccaagtccatcatcgattccatcgccaacccgcacgtgcccgaggccggcgaaacc
tacaacggcaaggtcgtcaagaccacgtcgttcggcgctttcgtgaacctcacccccggc
actgacggcctgctgcacatctcccagatccgcaacctggccaacggcgagcgtattgac
gctgtcgaagacgtgctcaaggaaggcgacaccgttgaggtgatcgttcagggtgtcgat
gatcgcggcaagatctccctggccattcctggtttcgaggatcaggagaacaacgcccgc
ccgagccgtggcgatcgcgatgaccgccgtggcggccgtggccgtggtgaccgtgacgat
cgccgtggcggccgtggccgtcgctccgatcgcgatgaccgtgacttcgacgatcgtgac
gaccgtccgcgtcgccgtcgctccgatgacttcgaggatgattacgacgaccgtccgcgt
cgccgtcgctccgatgaccgtgacttcgatcgcgatgatcgcgatgatgatcgtccgcgt
cgccgtcgttctgccgaccgtgacttcgacgatcgcgatgaccgtgatgctcgcgactcc
cgtgatgatgatcgtccgcgtcgccgtcgctcttccgatcgcgatgaccgtggcgatcgt
gatgaccgccgtggcggttcccgtggccgtggccgtggctcggaccgtaacccgcgctac
gccaccgacgacaactacgacgactaccgcgccgaccgcgaagagcgtactgagcgcccg
cgtcgccgcgtccgtcgcgactttgatccgttcgaggactaa
DBGET
integrated database retrieval system
