Bifidobacterium longum subsp. infantis ATCC 15697 (JGI): Blon_0160
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Entry
Blon_0160 CDS
T00794
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bln
Bifidobacterium longum subsp. infantis ATCC 15697 (JGI)
Pathway
bln03030
DNA replication
bln03430
Mismatch repair
bln03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Blon_0160
03430 Mismatch repair
Blon_0160
03440 Homologous recombination
Blon_0160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bln03032
]
Blon_0160
03400 DNA repair and recombination proteins [BR:
bln03400
]
Blon_0160
Enzymes [BR:
bln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Blon_0160
DNA replication proteins [BR:
bln03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Blon_0160
DNA repair and recombination proteins [BR:
bln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Blon_0160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA_30
RuvB_N
AAA_22
zf-CXXC
AAA_14
AAA_19
DEAD
AAA_2
Rad17
Motif
Other DBs
NCBI-ProteinID:
ACJ51289
UniProt:
B7GT66
LinkDB
All DBs
Position
187520..190291
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AA seq
923 aa
AA seq
DB search
MALALYRRYRPDTFEGVIGQDQVTVPLMRALDEGKLTHAYLFSGPRGCGKTSSARILARC
VNCAKGPTSHPCGECESCKDLATGGPGSIDVVEIDAASHNGVDDARELRERAGFAPARDR
YKIFILDEAHMVTQQGFNALLKIVEEPPEHVMFVFATTEPDKVIGTIRSRTHHYPFRLVP
QEVMGPYLETICDKEGIKPEPGVLKLAMRAGGGSMRDTLSVLDQLMVGSVEGVITHDAAV
ALLGFTPEALIGEAVDAVINHNGEALYGVIQKVVVGGFDPRRFVEDLLARVRDLLVLTLA
GDRAESVLSDTAEAEDMDDLHRQAKALGLGALTAMADIINTTLGAMTGAISPRMRLELLA
ARLLAGSESGFATAAPAPVASGMPPAAASSTTSAASGAGASGFAGSSRGGFAGASHGGFS
GAARNQQVAAPQSTASHESVGGNGPVNGLVSDRPAGSPSVQPAVATAAANAGWGAPAASP
AAPAQPVASPAASDNRSIDEKWDAAVAALPETIREYVSRDKVPTVKFGPNRKGLPCLSMT
FDKSLSQHAFALAVDNSGKKAAAVVMDAVRNEFGANAVIAPSAVAANGERVESVKRMSPE
QLAKVKQQIAMAKAGLAASSLGAGLGIHMGSEPKAPKLAATGQAEDTDDSHRADQSGAST
AAKSWSNDDPWAKPAVSNASPQSADGFAPNEPATTPAPEEHHKKHVAVPDISDGVDPWAA
PAAPVAPAASVASAGPTEQSTGQPAAASSATTAAGASDDPWNQMQSQATASLALQPVEAD
PWNQPYQQSPHDDPWNQPQSQTPASSVPQTVSGNMSGDDPWNQPQSVPQPAAGDDPWNQP
QPAQPTPNADPWNSRPQPQPKPQPQVAAEDDEYSMSDQSLGEATAMNLDDLKKLFEVKKV
EQFAADDPKNPKNIQPAKKHSDE
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggcacttgcattgtatcgtcgctatcgtccggacaccttcgaaggggtcatcggtcag
gaccaagtcacggtcccgctgatgcgcgccttggacgagggcaagcttacgcatgcctat
ctgttctcagggccgcgaggatgcggtaaaaccagctccgcgcgtatcctggcccgttgc
gtcaactgtgccaaagggccgacttcccacccctgcggcgaatgcgaaagctgcaaggac
ctggccaccggcggtccgggttccatcgacgtggtcgaaatcgatgcggcctcgcacaac
ggtgtggatgatgctcgagaattgcgagaacgcgctgggttcgcccctgcgcgcgaccgc
tataagattttcattctcgatgaggcccatatggtcacgcagcagggcttcaatgcgctg
ctcaaaatcgttgaagagccgcctgaacatgtgatgttcgtcttcgccaccaccgaacca
gacaaggtgatcggcaccatccgttcgcgcacccaccactatccgttccgtctggtgccg
caggaagtcatgggtccctacctggagacgatctgcgacaaggaaggcatcaagcccgag
cccggtgtgctgaaactggcgatgcgcgccggtggcggctccatgcgagataccctgtct
gtgcttgaccagctgatggttggttcggtcgaaggcgttatcacccatgatgccgctgta
gccctgctcggcttcacgccggaggcgctgatcggtgaggccgtggatgcggtaatcaat
cacaacggcgaagccctgtacggcgttatccagaaagtcgtggtcggcggattcgatccg
agacgattcgtcgaagacctgttggctcgtgtgcgtgatctgctggtgcttacgttggct
ggggaccgtgcggaatccgtgctgtctgacacggccgaggccgaggatatggacgacttg
caccgtcaggccaaggcgttgggcctgggagccctgaccgccatggcagacatcatcaac
actacgttgggtgccatgaccggagccatttctccgcgtatgcgcttggaactgctggcc
gcacgattgttggccggcagtgaatcaggctttgcgacagccgctcccgcgccagtcgct
tctggtatgccgcctgcggctgcttcttcgactacgtcagccgcttccggtgcgggtgcc
agtggttttgccggctcatcgcgaggcgggtttgccggagcctcacatggcggattctcc
ggtgctgcacgcaaccagcaagtagccgcgcctcagagcaccgcttcccatgaatctgtt
ggaggcaatggccctgtcaacggcctggtcagcgaccgacccgcgggctctccgtctgtg
caacctgctgtagcaactgctgctgccaatgccgggtggggcgctcccgccgcgtcgccg
gccgccccggcccaaccggtggcctcgcctgcggcatcggataatcggtccatcgacgag
aagtgggatgcagccgtcgccgctttgccggaaaccattcgtgaatatgtgtcacgagac
aaggtgccgaccgtaaaattcggtcccaaccgtaagggtctgccttgcctgtcgatgacg
ttcgacaagtcgctgagccagcacgctttcgccttggccgtggataacagcggtaagaag
gcggcggccgtggtgatggatgccgtgcgcaacgagttcggtgccaatgcagttattgca
ccttctgcggtcgcggcgaatggcgagcgagtcgaatccgtcaaacgtatgagcccggag
caattggccaaggtcaagcagcagattgccatggccaaggccggattggccgcgtcgagt
ttgggcgcgggcctgggcattcatatggggagcgagccgaaagctccgaagctggctgca
acaggccaagccgaggatacggacgacagccatcgagccgatcaatccggtgcatccacg
gcggcgaagagctggagtaacgatgacccttgggccaagccggctgtaagcaacgcttcg
ccgcaatctgcagacgggttcgcacctaacgagcccgctactacgcctgcgcccgaagaa
catcacaagaagcatgttgcggttccggacatcagtgatggtgttgatccgtgggccgct
ccggccgctcctgttgcacccgctgcgtccgttgcgtccgctgggcccactgaacagtcc
acggggcagccagccgccgcatcttccgctacgacagctgccggcgcgagcgatgatccg
tggaatcagatgcagtctcaggctacggcctcactggcactgcaaccggtcgaagccgac
ccgtggaaccagccatatcagcagtctcctcacgatgatccgtggaatcagccgcagtcc
cagactccggcttcttcggttcctcagacagtgtcgggcaatatgtcgggcgatgacccg
tggaaccagccccaatcggttccacagccggctgccggcgatgacccgtggaatcaaccg
caacccgcacagccgaccccgaatgccgacccgtggaatagccggccccagccccagccg
aaaccgcaaccgcaagtcgcggccgaggatgacgaatactcgatgagcgaccagtcgctc
ggcgaggcgacggccatgaatctcgacgatctgaaaaagctattcgaggtcaaaaaagtc
gagcaattcgcggcagatgatccgaagaaccccaagaacatccagcctgccaagaagcac
tcggatgaataa
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