Bifidobacterium longum subsp. infantis ATCC 15697 (JGI): Blon_0173
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Entry
Blon_0173 CDS
T00794
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bln
Bifidobacterium longum subsp. infantis ATCC 15697 (JGI)
Brite
KEGG Orthology (KO) [BR:
bln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bln03032
]
Blon_0173
03400 DNA repair and recombination proteins [BR:
bln03400
]
Blon_0173
Enzymes [BR:
bln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Blon_0173
DNA replication proteins [BR:
bln03032
]
Prokaryotic type
DNA Topoisomerases
Blon_0173
DNA repair and recombination proteins [BR:
bln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Blon_0173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
SBP_bac_3
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ACJ51302
UniProt:
B7GT79
LinkDB
All DBs
Position
204972..208055
Genome browser
AA seq
1027 aa
AA seq
DB search
MATKLVIVESPTKAHKIGDYLGKGYTVMASVGHIRDLAQPSQVPVADKAKFGKFGVDVND
GFKPYYIVDGDKKRTVSELKSALKNADELYLATDEDREGEAIAWHLVQTLKPKVPVKRMV
FHEITKNAINASLGKTRDVDSHMVDAQETRRILDRLYGYELSPVLWRKVGPGLSAGRVQS
VATRLIVERERERMAFRRAPYWDIVATLSAPDALGERGEFSARMIALGGKRLAGSKDFGA
DGQLTPDGFAANVRQLDEAGATAVASALKTADFTVMSMETKPYRRRPQPPFTTSTLQQTA
GNRLGMGARAVMRAAQSLYENGYITYMRTDSVTLSQEAIAAARNAVSYHFGDAFLSDEPK
QYATKTAGAQEAHECIRPAGSRFHDPDELASKLPGDQLRLYTLIWQRTLACQMADATGST
ATVRLSAPAGPAEGEAVFQASGTVIEFPGFMKATGEGRKPKAAVPGAGAGSDQTAAAGKT
DAKAVRGDASESNTSLPPMSVGQQVEASDVEPDGHETQPPARYTEATLVKTLEAKEIGRP
STYASIISTIMDRGYVYERGRALIPSWLAFSVTKLLETNFPKLVDYQFTAEMENGLDRIA
HGEESGRDWLTHFYFGSGEGAARNADEAHEGLQQQVAQLGEIDARAINTIDIGDGLHVRV
GRYGPYLEDMEHLDAEGNPKRASLPDTIAPDELTVAVARDLIDNHSGGPRELGVDPVSGG
TVEVRNGRFGPYVALVPPAETSAGAAGDTAGASAAKKGSKKAAAAAASRPKMASLFKTMS
PESLSLEDALKLLSLPREVGTYEETNAETGEVSECTVAANNGRYGPYLTKTGADGKSETR
SLASEDEIFTVDIDKAKELFSQPKYGRGRGRGAAKPPLRDLGKDPNTGKNVTIKDGRFGA
YITDGETNRTVPRQYTPESITPDDAFRLLAEKRAAGPSTRGRRGAGRAGGAKAVAGKGKK
GAASVVSAQEARRAERRAEVKKLANKGWSNQRIAEKLSSTAATVKKDVDWLTANEGYERP
AVIPKRG
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaaactggtgattgtggagtctccgaccaaggcccacaaaatcggtgactac
ctgggcaaggggtataccgtcatggcgtcggtcggtcatatccgcgacctcgcgcagccc
agccaggtgcccgtggcagacaaggccaagttcggcaagttcggcgtggacgtcaacgac
gggttcaagccctactacatcgtggacggcgataagaagcgtacggtcagcgaactcaaa
tcggccctgaagaacgccgacgaactctatctggcgactgatgaggatcgcgagggcgag
gccatcgcgtggcacttggtgcagaccttgaaacccaaggtgccggtcaagcgcatggtg
ttccacgagatcaccaagaacgccatcaacgcctcgctgggcaaaacgcgcgatgtcgac
agccatatggtcgacgctcaggagactcgccgtattctcgaccgtctgtacggctatgag
ctgtcgccggtgctgtggcgcaaggtgggaccgggcctgtccgccggccgcgtgcagtcc
gtggccacacgactgatcgtggaacgcgagcgcgagcgtatggcgttcaggcgcgcgccg
tactgggatatcgtcgccacgctgtccgcgcctgacgcgctgggggagcgtggcgaattc
tccgcccgcatgatcgcgctcggcggcaagcgactcgccggctccaaggatttcggtgcc
gacggccagctgaccccggacgggttcgcggcgaacgttcgccagcttgatgaggctggt
gccaccgccgtggcttcggcactgaagaccgccgatttcactgtgatgtcgatggaaacc
aagccgtaccgccgccgcccgcagccgccgttcaccacctcgaccctgcagcagaccgcc
ggcaatcgcctcggcatgggtgctcgcgccgtgatgcgtgcagcacagagcttgtacgag
aacggctacatcacctatatgcgaaccgattcggtgacgctgtcgcaggaggccatcgcc
gccgcccgcaacgccgtctcctatcattttggcgacgcattcctctctgacgagcccaag
caatacgccaccaagaccgccggcgcgcaggaagcccacgagtgtattcgcccggcgggc
tcgcgcttccacgacccggatgagctggcttccaaacttcccggcgaccagctgcgccta
tacacgctgatctggcagcgcacgcttgcctgccagatggctgacgccaccggttccacc
gccaccgtgcgcctgtctgcgccggctggccccgccgagggcgaggccgtgttccaggcg
tccggcaccgtcatcgaattccccggctttatgaaggccacgggggagggacgcaagccc
aaggccgccgttcccggcgctggggctggctcggaccagactgctgccgccggcaagacg
gacgccaaggccgtcaggggtgacgcatccgaatccaacacctccctgccgccgatgagc
gtcggccagcaggtcgaggcaagcgacgtcgaaccggacggccatgaaacccagccaccg
gcccgctacaccgaggccacgctggtcaagacgctggaggccaaggagatcggccgcccg
tccacctacgcgagcatcatctccacgattatggatcgcggctatgtgtatgagcgtggc
cgtgcgctgatccccagctggctggcattctccgtgaccaagctgctggaaacgaacttc
cccaagctggtcgactaccagttcaccgcagagatggaaaacggccttgaccgcatcgcc
cacggcgaggaatccggccgcgactggctcacccacttctacttcggctccggcgagggc
gccgcccgcaacgccgacgaggcgcacgaaggcctgcagcagcaggtcgcgcagctcggc
gagatcgacgcgcgcgccatcaacaccatcgacatcggcgacggcctgcacgtgcgcgtc
ggccgttacggcccgtatctggaagatatggagcatctggacgccgaaggcaacccgaag
cgcgcctccctgccggacaccatcgcgccggatgagctgacggtggccgtggcccgcgat
ttgatcgacaaccactccggtggaccgcgcgagctgggcgttgacccggtatccggcggt
accgtcgaggtgcgcaatggccggttcgggccgtatgtggcgttggtgccgccggctgag
acttcggctggcgctgctggcgatactgctggtgcttctgcggccaagaagggttcgaag
aaggccgcggccgccgccgcgtcgcgcccgaagatggcctcgttgttcaagacgatgagc
cctgaatcgctgtcgctggaagacgcgctaaagctgctgagcctgccgcgcgaagtgggc
acatacgaggaaaccaacgccgaaaccggcgaggtatccgaatgcacggtagccgccaac
aacggtcgctacggcccctacctgaccaagacgggtgccgacggcaagtcggagacccgc
tcgctggcctcggaagacgagatcttcacggtcgatatcgacaaggccaaagaactgttc
tcgcagcccaagtacggccgcgggcgtggccgtggtgccgccaagccgccgctgcgtgat
ttgggcaaggacccgaacaccggcaagaacgtgaccatcaaggacggccgtttcggcgcg
tacatcaccgatggcgagaccaaccgcacggtgccgcgtcagtacacgcctgaatccatc
acccctgatgacgccttccggctgctcgccgaaaagcgtgcggctggtccctccacccgt
ggccgtcgcggtgctgggcgtgctggtggcgccaaggccgttgccggcaagggcaagaag
ggcgctgcttctgtggtttcggcgcaggaggctaggcgcgccgaacgccgtgccgaggtg
aagaagctggcgaacaagggctggtccaaccagcgcatcgccgaaaagctcagctccacc
gccgccaccgtcaagaaggatgtcgactggctgaccgccaacgagggctacgagcgcccc
gccgtaattcccaagcgtggctga
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