Bifidobacterium longum subsp. infantis ATCC 15697 (JGI): Blon_1712
Help
Entry
Blon_1712 CDS
T00794
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bln
Bifidobacterium longum subsp. infantis ATCC 15697 (JGI)
Brite
KEGG Orthology (KO) [BR:
bln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bln03016
]
Blon_1712
Enzymes [BR:
bln01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Blon_1712
Transfer RNA biogenesis [BR:
bln03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Blon_1712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
ACJ52788
UniProt:
B7GSV8
LinkDB
All DBs
Position
complement(1874324..1875625)
Genome browser
AA seq
433 aa
AA seq
DB search
MSDVRDTEPRLLKEPRGGVPDVTSTLDGYHRACDALAEATGSLAADAERASGFRYGHEDW
LIQFKREGAGIALLDPVALTRAGADWNEFNDAVGDATWILHDSLMDLPGFAEIGLKPKAL
FDTEIAARLLGLHRFGLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIE
LETLMRRDLKAAGKDEWAAEEFSHALVAGLAPRKLHPIPWLRISRITQLSRDPRGLAIAK
SLWEERDRLARQYDIAPSLLLTDSSIIEAATNKPHNAAQFRALRSLNERVRIHTGTEQDK
MFERYAPIQRTVKPKVWKQAIDRAMALKPTQWPTMPAPEQGENGVVNAPRSMRLWQQRHP
ERYDRLQRVRRVINRIAEDTRTPAEMIIKPQALRNLCWVEDPVEVDVEAFLIEQGARNWQ
VKLIAPSVSGVIM
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgacgtccgtgacaccgaaccccgactgctgaaagagcctcgcgggggagtgccc
gatgtcacttcgacgctggatggctatcatcgtgcctgcgatgcgctggccgaggcgacg
ggctcgctggccgccgacgccgaacgtgcgtctggattccgctatggacatgaggattgg
ctgattcagttcaaacgtgaaggcgcgggcatcgccttgcttgatcccgtcgccctgaca
cgggccggagctgactggaatgaattcaatgacgccgtgggcgacgctacgtggattctg
catgattctctgatggacttgcctggattcgccgaaatcggactcaaacccaaggccttg
ttcgacacggaaatagcggcgcgattgctcggcctgcaccgcttcggtctggccgccgtc
accgaacattacctcggcatcacgctggccaaagagcattccgccgccgattggtcctac
cgtccgctgccgcgcgactggcgcaactatgctgcgctcgacgtggaggtgcttatcgaa
ctcgaaaccttgatgcgtcgtgacctgaaagccgcaggcaaggatgagtgggccgctgaa
gagttttctcacgctttggttgcgggccttgccccgcgcaaactgcatccgattccttgg
ctgcgtatctcgcgcatcacccagctgagtcgtgatccaaggggcttggccatcgccaaa
tccctatgggaggagcgcgaccggctcgcccggcaatacgatattgcccccagcctgtta
ttgaccgattcgtcaatcatcgaggccgcgaccaacaagccgcacaatgccgcccaattc
cgcgcgctccgatccctgaacgagcgtgtgcgcatccataccggtaccgagcaggacaaa
atgttcgagcggtacgcgccgattcagcgtacagtcaaaccgaaggtctggaagcaggcc
atcgaccgagccatggccctgaagcccacccaatggcctaccatgcctgcccccgaacag
ggcgaaaacggtgtggtgaacgcgccccgatccatgcgactgtggcaacagcgccatccg
gagcgttatgaccgtctgcaacgggtacggcgtgtgatcaaccgcatcgccgaagacacc
cgcacgccggccgagatgatcatcaagccacaggccctacgcaacctgtgctgggtggaa
gacccggtggaagtggacgtcgaggcgttcctgatcgagcagggcgcaaggaactggcag
gtgaaactcattgcaccgtccgtaagtggcgttatcatgtag
DBGET
integrated database retrieval system
