Bifidobacterium longum subsp. infantis ATCC 15697 (JGI): Blon_2037
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Entry
Blon_2037 CDS
T00794
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bln
Bifidobacterium longum subsp. infantis ATCC 15697 (JGI)
Pathway
bln03420
Nucleotide excision repair
bln03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Blon_2037
03430 Mismatch repair
Blon_2037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bln03400
]
Blon_2037
Enzymes [BR:
bln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Blon_2037
DNA repair and recombination proteins [BR:
bln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Blon_2037
MMR (mismatch excision repair)
Other MMR factors
Blon_2037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
ACJ53104
UniProt:
B7GUF8
LinkDB
All DBs
Position
complement(2230290..2234321)
Genome browser
AA seq
1343 aa
AA seq
DB search
MSTFTPSAEQAAIIDAPVNADVLVVAGAGSGKTFTMTQRIIALINRGVAPERILGLTFTR
KAAGELLERVSAAVAGDMAGSTTATVSDRAFLKPAIFTYDAFFQTIVRQYGLLVGFDQNT
QPLSAAGALQLATEVIDSHMDLAFSEDFGAFSSLANRVLALSDAIGSAMIGAGCTSFDDA
INRVRQWDSAFINRLQQAVADEPMPEDEPKIPKIRRLKKDTDASWQAKLDDRAEHLHARC
TYHCGALLETTRKRDILLQLVEAYAQAKRERNMAEFSDFTIAAYQLIERFPSIGERTRRR
YSHVLLDEYQDTSTTQAALLAALFHVDASRRSAVNAVGDPFQSIYAWRGASPGAFRMFQQ
DFHLSAGYKPFPLSVTRRNSRIVLEAANNLTLPLRSNPSRPSSSLMREVDVSSLDPMPDA
PEGTLGVLGFATAGQEIDAVVRFCKTAIARHRSAAEQQEQMPGEQKAPVAVLFRSKSHMP
EYQAALEQAGLTTFVVGYSALLERPEIRDLMALLHVAADHTDTGSLMRLLATPRFTMSAA
DLTMLARFAEEQNMEQRFQSLVQAGLAQPDTSANEWAAVVREYRDQVANAVFLPDVLLRG
DLVKLLERLSAHGRNAITRAAVMLSQVHDAVGRPLGDVIRAGIEALDLDIDTVLAGVLHN
PQHRANPALAHMPMDAIVDLVDTYTQEIAAEQTPSLHGFITWVDHLASVEDEAASLPDAP
VDVELMTVHQSKGLEWDAVAVVGLTAGGFPSNQGDHLKIVLDEHHTGGTEQGHWTAPEYH
ETADSWLTNPTAVPVPIRADAGILPRFPHDADVEADPIASLAALDDVELIDDEVFGSMRE
FGDGVEEVDASGWYLTQAEEYGRRLHADERRLMYVALTRAREDALMTYCAYTGESGRDPS
VVPKGSRAAQPSNFWLEVHDALQAREHAISAQDCVGRLQAANAGKPMLISAQGEAIAPPE
GFFIGEHAAAYGDAVVGEAWQTPITQTDAAVELPWPATLSDAVHEQLSRGIDVIAADSSS
LEQRQDAGPLLQRAQLLVDDADLMADAASGQSLDEAVKAKAQRILAAGRQNVTSLQARVG
GMSEREERLYWRSIIRPIPRISSPAAEAGTQFHAWAEQFINAGKPDEAVLAYEAESSMPH
TGQDAVFVSREAMLADLAERERQCRKPSTRQPAVPQSTAQQSASAASAVSAASISSDNAT
ESKLVAWQRRLAESSWAKRIPAWTERAIVVDVPGVGLVNGKLDAVFIGGLDPSSTTVRFT
VVDWKTGRRPTKPDDITRKLAQLDMYRLLLAAVEGVELDSIDATLYYVSEPDEGLRELHA
RAKTKQEILTELSSGIPEQSDND
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgttcactcccagtgcggaacaggccgccatcatcgatgcgccagtcaatgct
gacgtactggtggttgccggtgccggttccggcaaaacctttacgatgacccaacgcatc
atcgcgcttatcaatcgaggtgtggcacctgaacgcatccttggcctgaccttcacacgc
aaggccgcaggcgaactgctggaacgcgtctccgccgcagtggccggtgatatggcgggc
tctacgaccgccacggtgtctgatcgggcattcctcaagccggccattttcacgtatgac
gccttcttccagaccatcgtgcgccaatatggattgcttgtcggattcgatcagaacacg
caaccattgagcgcagccggagcgcttcaactggccaccgaagtcatcgacagtcacatg
gatctggcgttcagtgaggattttggcgccttctccagtttggcgaaccgtgttctggcg
ttgtcggatgccattggcagtgccatgatcggtgccggctgcaccagcttcgatgatgcg
atcaatcgagtacggcaatgggattcggcattcatcaatcgattgcaacaagccgtcgca
gacgaacccatgcccgaggacgagccgaaaatccccaagatcagacgactgaagaaagat
accgacgccagctggcaagccaagctcgatgaccgtgccgaacatctgcacgcccgttgc
acctatcattgcggtgcgctgctggagaccacgcgcaaacgcgatattctgctccagctg
gtggaggcctatgcccaagccaagcgggaacgcaatatggccgaattctccgacttcacc
attgccgcgtatcagcttatcgagcgcttcccctccatcggagagcgcacgcgccgcagg
tacagccatgtgctgctcgacgaatatcaggacacctccaccacgcaggccgctctgctg
gcagcactgttccatgtggatgcgtcacggaggtccgccgtcaacgcggtgggtgatccg
ttccagtcgatttacgcatggcgtggtgccagccctggtgcattccgtatgttccagcaa
gatttccacctgtctgccggatacaagccattcccgttgtccgtcaccaggcgcaacagc
cgtatagtgctcgaagccgccaataatctcacgctgccgttgcgctccaatccgtcgcgt
ccctccagctcattgatgcgtgaggtcgatgtctcatcgctcgaccccatgcctgatgcc
cccgaaggaacattgggagtactgggcttcgccacggccgggcaggagatcgacgccgta
gtgcgtttctgcaagacggccatcgcacggcaccgttccgcagccgaacaacaggaacag
atgccgggcgaacagaaagcgccggtcgccgtgctgtttcggtccaaatcacatatgccc
gaatatcaggcggcattggaacaggccggattgaccacattcgtggtcggctattccgcg
ctgttggaacgtccggaaatccgcgatctgatggcgttgctgcacgtggccgccgaccac
accgatacgggatcgctgatgcgtttgctggccacgccacgattcaccatgtccgcagcg
gatttgaccatgttggcccgttttgctgaagaacagaacatggaacaacgcttccaatca
ttggtgcaggccggccttgcccaaccggatacatcagcgaatgaatgggcggctgtggtg
cgtgagtaccgcgatcaggtggccaatgcggtattcctgccagacgtattgctacgcggc
gacctggtaaaactgcttgaacggttgagcgcacacgggcgcaacgccataacccgggcc
gcggtgatgctcagtcaggtgcatgatgccgtcgggcggccactgggcgacgtgattcgc
gccggcatagaagcgttggatcttgacatcgacaccgtattggccggtgtgctgcataat
ccgcagcaccgcgccaatcccgctttggcgcatatgcctatggatgcgattgtggatttg
gtggatacgtacacgcaagagattgccgctgagcaaactccctcattgcatgggttcatc
acatgggtggatcatctggcttcggtggaggatgaagccgccagtctccccgacgctccg
gtggatgtggaactgatgaccgtacaccagtccaaagggttggaatgggatgccgttgcg
gtagtggggcttaccgccggcggattccccagcaatcagggcgaccatctcaagatcgtg
ctggacgaacaccatacgggaggcaccgagcaaggtcactggaccgcacccgaatatcat
gagaccgccgactcctggctcaccaaccccaccgccgtgcccgtgcctatacgcgccgat
gccggcattttgccgcgattcccccatgatgccgatgtggaagccgaccccatcgcatcg
ttggcggctttggatgatgtggagcttatcgatgatgaagtgttcggctccatgcgcgaa
ttcggcgatggcgtggaagaagtggatgcatccggctggtatttgacgcaggcggaggaa
tatgggcgccggctgcatgccgacgaacgtcgattgatgtatgtggcgcttacccgtgcg
cgggaagatgccctgatgacctattgcgcctatacgggcgaatccgggcgggacccgtca
gtggtgcccaaaggctctcgcgccgctcagccatccaatttctggcttgaagtgcatgac
gcgctccaagcccgtgaacatgcgatatcggctcaggactgtgtgggacggctgcaagcc
gccaatgccgggaagcccatgctgatctcggcgcaaggcgaagcgattgcccctcccgaa
gggttctttatcggagagcatgccgcggcatacggtgacgccgtggtgggggaggcgtgg
caaacgccgattacgcagacggatgccgctgtcgaattgccgtggccggctaccctcagc
gacgcggtgcatgaacagttgtcacgtggcatcgatgtcatcgccgcagattcctcgtca
cttgagcagcgccaagacgccggcccactgctgcaacgggcgcaattgctggtggacgac
gccgatttgatggccgatgccgccagcggccagtcgcttgatgaggcagtcaaagccaag
gcgcaacgcattctggccgccggacgccagaacgtgacaagcctgcaagcccgcgtaggt
ggcatgagcgaacgggaggagcgcctctactggcgtagcattatccgtccgattccacga
atatcgtctccggcggccgaagccggcacgcagttccatgcgtgggccgagcaattcatc
aatgccggtaaaccggatgaagcggtactggcatatgaagccgaatcaagtatgccgcat
acaggtcaggatgcggtattcgtttcccgggaagccatgttggccgatttggccgaacgg
gagcggcaatgtcgcaagccatccacacggcagcccgctgtcccacagtccacggctcaa
caatccgcatccgccgcatccgccgtatccgccgcatccataagtagcgacaatgccacc
gagtccaagctggtggcgtggcagcgcagactggccgaatcatcgtgggccaagcgcatc
ccggcgtggacggagcgtgccatcgtcgtggacgtgccgggcgtgggcctggtcaatggc
aaactcgatgcggtattcatcggtggacttgacccgtccagcaccaccgtacgctttacc
gtggtcgactggaaaaccggtcgtcggcccaccaagccagacgacatcacccgcaaactc
gcccagctcgacatgtaccgactgctgctggcagcggtcgaaggtgtggaattggacagt
atcgacgccactctctactatgtcagtgagcccgacgagggcttgcgcgagcttcacgcc
cgtgcgaaaaccaaacaggaaatccttaccgagttgagctccggcattcccgaacaatct
gacaacgactga
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integrated database retrieval system
