Bifidobacterium longum subsp. infantis ATCC 15697 (JGI): Blon_2048
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Entry
Blon_2048 CDS
T00794
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bln
Bifidobacterium longum subsp. infantis ATCC 15697 (JGI)
Pathway
bln03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bln00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Blon_2048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bln03021
]
Blon_2048
03400 DNA repair and recombination proteins [BR:
bln03400
]
Blon_2048
Enzymes [BR:
bln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Blon_2048
Transcription machinery [BR:
bln03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Blon_2048
DNA repair and recombination proteins [BR:
bln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Blon_2048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ACJ53112
UniProt:
B7GUG6
LinkDB
All DBs
Position
complement(2253112..2257149)
Genome browser
AA seq
1345 aa
AA seq
DB search
MLDVNAFDKIRIGLATADDIRGWSHGEVKKPETINYRTLKPEKDGLFGEQIFGPTRDWEC
ACGKYKRVRFKGIVCERCGVEVTRSRVRRERMGHIELAAPVTHIWFFKGVPSRLGYLLNV
TPKDLERVIYFASYMVTEVNEDERHNDLPGLQDEFDSEIKRLEQRRDSDIEARAKKVEED
LAALEEAGEAKGPARTKLRNGAERDMAAIRTRYNDQIARVDAVFDKFKKLKPGDMVDDVD
LWREMQDRYGDYFDGCMGAEAIKKRLQSLDLETISKELREEIKDASEQRKTKALKRLKVV
NAFLTTGNKPEAMVLDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIE
LGAPEIMLNNEKRMLQEAVDSLFDNGRRGRPVTGASNRPLKSLSDMLKGKQGRFRQNLLG
KRVDYSGRSVIVVGPSLRMHQCGLPKPMALELFKPFVIKRLVDLNYAQNMKSAKRLVDRG
DAEVWGVLEEVISEHPVLLNRAPTLHRLGIQAFEPILVEGKAIHLPPLACAAFNADFDGD
QMAVHLPLSAEAQAEARSLMMASDNILKPADGHTVTMPSQDMILGLYYLSTVLEGAKGQG
RVFSSLEEAEMALDRHEIDMQAKVLIRLPESFVLPKNWEPGEVKVLDPREGEDEVVKEER
FHDGTVLFATSYGRILFNETLPTDYPFVNEQVAKGRLSKIVDDIAMRYSTQQVAATLDAL
KDLGFTRAPWSGVSFAFSDVNEPPERDEKIAEYEAKADKVNANYEMGLLTEEARRQELID
LWTECTAEVSKEVEEKFDPTSNLAIIVQSGARGNMMQINQIAGMRGLVANPKGEIIPRPV
KSNYRDGLSVLEYFISQHGARKGLADTALRTAESGYLTRRLVDVSQDVIVREEDCGTKAG
LPIRVAERDNDGNLVLVKAADGGPYSRLLAADVIDPADGQTVLYKRDDALSMDVLNDLVA
HGVEEVKCRSVLTCESKRGVCAKCYGWSLATNKLVDVGETVGIVAAQSIGEPGTQLTLRS
FHSGGVAAASDITQGLPRVTELFEARTPKGEAPITEFAGSIKIVENDRGRQIILTPDADS
GAPKEDGVIKPITYQVSKRVPLKVADGDHIKVGTQLVEGSVDPKKILTILGKRAAQVNIV
EEVHTVYRSQGVDIHDKHIEVIVHQMTRRVTIIDSGDTDLLPGELVDNARFREINRNIVK
NGGRPAVGRPALMGITKASLATDSWLSAASFQETTRVLTEAALSEKVDDLKGLKENVIIG
KLIPAGTGLARYRNAVVEPDKAIRDTIYPNFGLGGDGDLGDATFSDADLSDLNFSNLEFG
DLKLGDDFNPDDFYSDQGGQPDIEE
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacgtcaacgcatttgacaagattcgcatcggccttgccaccgccgatgacatc
cgtggttggagccacggtgaggtcaagaagcctgaaaccatcaactaccgtacgctgaag
cctgagaaggacggtctgttcggcgaacagatcttcggcccgacccgtgactgggagtgc
gcctgcggcaagtacaagcgcgtgcgtttcaagggcatcgtctgcgagcgatgcggtgtc
gaagtgacccgcagccgcgtgcgccgtgagcgcatgggccacatcgagctcgccgccccg
gtgacgcacatctggttcttcaagggtgtgccttcccgcctcggctacctgctgaacgtc
accccgaaggatctggagcgcgtgatctacttcgcctcctacatggtcaccgaggtgaac
gaggacgagcgccacaacgatctgcccggcctgcaggacgagttcgattccgagatcaaa
cgccttgagcagcgccgtgactccgacatcgaagcccgcgccaagaaggtcgaagaggat
ctcgctgcccttgaggaggccggcgaggccaagggcccggcccgcaccaagctgcgtaac
ggtgccgagcgcgatatggccgccatccgcacccgctacaacgaccagatcgcccgtgtg
gacgccgtcttcgacaagttcaagaagctcaagcccggcgacatggtcgacgacgtggac
ctgtggcgcgagatgcaggaccgctacggcgattacttcgacggctgcatgggcgccgaa
gccatcaagaagcgcctgcagtcccttgacctggagaccatctccaaggaactgcgcgag
gagatcaaggacgcttccgaacagcgtaagaccaaggccctgaagcgtctcaaggtcgtc
aacgccttcctgaccaccggcaacaagccggaggccatggtgctcgacgtgatcccggtc
atcccgccggacctgcgcccgatggttcagctcgacggtggccgcttcgccacctccgac
ctcaacgacctgtaccgccgtgtgatcaaccgtaacaaccgtctgaagcgactgatcgag
ctcggcgcccctgaaatcatgctcaacaacgagaagcgcatgcttcaggaagccgtcgac
tccctgttcgataacggccgtcgtggtcgcccggtcaccggtgcctccaaccgtccgctg
aagtccctgtccgacatgctcaagggtaagcaaggtcgtttccgtcagaacctgctcggt
aagcgagtcgactactccggccgttccgtgatcgtggtcggcccgtccctgcgcatgcac
cagtgtggtctgccgaagccgatggccctcgagctgttcaagccgttcgtcatcaagcgc
ctcgtggacctgaactacgcgcagaacatgaagtccgccaagcgtctcgtggaccgcggc
gacgccgaagtgtggggcgtgctcgaggaggtcatctccgagcaccccgtgctgctcaac
cgtgcacctacgctgcaccgtctgggtattcaggcattcgagccgatcctggtggaaggc
aaggccatccacctgccgccgctggcctgcgccgccttcaacgccgacttcgatggtgac
cagatggcagtccacctgcccctgtccgccgaagcccaggccgaggcccgctcgctgatg
atggcttccgacaacatcctgaagccggctgacggtcacaccgtgaccatgccgtcccag
gacatgatcctcggtctgtactacctgtccaccgtgctggaaggcgccaagggccagggc
cgcgtgttctcctcgctggaagaggccgaaatggccctcgaccgccacgagatcgacatg
caggccaaggtgctcatccgcctgcccgagagcttcgtactgccgaagaactgggagccc
ggcgaggtcaaggtgctcgacccgcgcgaaggtgaggacgaggtcgtcaaggaagagcgc
ttccacgacggcaccgtgctgttcgccacctcctacggccgcatcctgttcaacgagact
ctgccgaccgactacccgttcgtcaacgagcaggtggccaagggccgtctgtccaagatt
gtcgatgacatcgccatgcgttactccacccagcaggtggccgccacgctggatgccctg
aaggatcttggcttcacccgcgcaccgtggtccggcgtgtccttcgcgttctccgacgtg
aacgagccgcccgagcgcgacgagaagatcgccgagtacgaggccaaggccgacaaggtc
aacgccaactacgagatgggtctgttgaccgaggaagctcgtcgtcaggaactcatcgac
ctgtggaccgagtgcaccgccgaggtgtccaaggaagtcgaggagaagttcgacccgacc
tccaacctggccatcatcgtgcagtccggtgcacgaggcaacatgatgcagatcaaccag
atcgcaggtatgcgaggcctcgtggctaacccgaagggtgagatcattcctcgtcctgtg
aagtccaactaccgcgacggcctgtccgtgctggagtacttcatctcccagcacggtgca
cgtaagggtctggccgataccgcactgcgtaccgcagaatccggttacctgacccgtcgt
ctggtcgacgtctcccaggacgtcatcgtgcgcgaagaggactgcggcaccaaggccggt
ctgcccatccgtgtcgccgagcgcgacaacgacggcaacctggtgctcgtcaaggccgcc
gacggtggcccgtactcccgtctgctcgccgccgacgtcatcgacccggccgacggacag
accgtgctgtacaagcgcgacgacgccctgtccatggacgtgctcaacgacctcgtggcc
cacggtgtcgaggaagtcaagtgccgttccgtgctgacctgcgagtccaagcgcggcgtg
tgcgccaagtgctacggctggtccctggccaccaacaagctggtcgatgtcggcgagacc
gtcggtatcgtcgccgcccagtccatcggtgagcctggtacccagctgacgctgcgctcc
ttccactccggcggtgtggccgcggcatccgatatcacccagggtcttccccgtgtcacc
gagcttttcgaggcgcgtaccccgaagggcgaggcgccgatcaccgagttcgccggcagc
atcaagatcgtggagaacgatcgcggtcgccagatcatcctgaccccggacgccgattcc
ggcgcgccgaaggaagacggcgtgatcaagccgatcacctaccaggtctccaagcgcgtg
ccgctgaaggtcgccgacggcgaccacatcaaggtcggcacccagctggtcgaaggttcc
gtggatcccaagaagatcctcaccatcctcggcaagcgcgccgcccaggtcaacatcgtg
gaggaggtgcacaccgtgtaccgctcccagggcgtggatatccacgacaagcacatcgag
gtcatcgtgcatcagatgacccgtcgcgtgaccatcatcgactccggcgacaccgacctg
ctgccgggtgagctggtggacaacgcccgcttccgcgagatcaaccgcaacatcgtcaag
aacggtggccgtccggccgtcggtcgtccggcgctcatgggcatcaccaaggcgtcgctg
gccaccgactcctggctgtccgccgcatccttccaggagaccacccgcgtgctcaccgaa
gccgcgctctccgagaaggtcgacgacctcaagggcctcaaggagaacgtcatcatcggt
aagctcatcccggccggtacgggcctcgcccgctaccgcaacgccgtggtcgagcccgac
aaggccatccgcgacaccatctacccgaacttcggtctgggcggcgatggcgatctcggt
gacgcgaccttctccgacgccgacctgtccgacctgaacttctcgaatctcgagttcggc
gatctgaagctcggcgacgacttcaacccggatgatttctactccgatcagggcggtcag
cctgacatcgaggagtaa
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