Bifidobacterium longum subsp. infantis ATCC 15697 (JGI): Blon_2196
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Entry
Blon_2196 CDS
T00794
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bln
Bifidobacterium longum subsp. infantis ATCC 15697 (JGI)
Brite
KEGG Orthology (KO) [BR:
bln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bln03016
]
Blon_2196
Enzymes [BR:
bln01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Blon_2196
Transfer RNA biogenesis [BR:
bln03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Blon_2196
Prokaryotic type
Blon_2196
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
SAMD1_SHD
Motif
Other DBs
NCBI-ProteinID:
ACJ53257
UniProt:
B7GNA1
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Position
complement(2434466..2435629)
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AA seq
387 aa
AA seq
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MLHTTPSGLLIIDKPQGVTSFDAVAAVRGALHIKKVGHAGTLDPMATGTLVIAFGHATRL
LNAIVAHDKTYEATIRLGLRTTTDDAEGEVLVDDEARSRWQTLSAQLTEGGQSGEPTALP
TASWQDLLTRTIATNFTGDIEQVPNTFSAIKINGQRAYDLAREGKEVELKPRPVTISEFT
VLNIRSGFVAGEQAAEPLREDANTGAIPALDVDVRVSCSSGTYIRALARDLGNELGVGGY
LTRLRRTRVGRFALPDDASGLIAPEAMLDTRTHTVTAHTDQKTFTNREGQTVTRNKCVLD
TPEGLAGDERRNWLLDHALTMEQAARGAMPALDITPEEASELRFGRRIERTISEPTAAIV
PQTHDVAAIIERANAHQAKPVTVFPLA
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
gtgcttcatacaacccccagcggcctactcatcatcgacaagccgcaaggcgtgaccagt
ttcgacgccgttgccgccgtgcgcggcgcgttgcacatcaagaaggtcggtcacgccggc
acccttgaccccatggccactggcacgctggtcatcgccttcggccacgccacgcgactg
ctcaacgccatcgtggcgcatgacaaaacctacgaggccaccatacgcctcggcctgcgc
accactaccgacgatgccgaaggtgaggtgcttgtcgatgatgaagcccgctcccgctgg
caaacgctgtcagcgcagctgaccgagggcggccagagcggcgaaccaacggcgctacca
actgcctcatggcaagatctgctcactcgcaccatcgccaccaatttcaccggcgatata
gaacaagttcccaatacattctccgccatcaaaatcaacggccagcgtgcctacgacttg
gctcgcgaaggcaaggaggtggaactcaaaccccgcccggtgaccatcagcgaattcacc
gtgctgaatatccgcagcggattcgtagcaggggagcaggccgctgaaccattgagggaa
gacgcgaacacgggagcgattcccgcacttgatgttgacgtgcgggtcagctgttcatcg
ggcacctatatccgcgcgctcgcccgcgacctcggcaatgaacttggcgtcggcggatac
ctgacccgtttgcgccgtacgcgagtcggccgattcgcgttgccggacgatgccagcgga
cttatcgctcctgaggcgatgcttgacacgcgaacccataccgtcaccgcacataccgat
cagaagacgttcactaatcgggaagggcaaaccgtcacgcgcaacaagtgcgtattggac
actcctgaaggtcttgccggtgacgagcgccgcaactggctgcttgaccatgccctcacc
atggaacaggccgctcgaggtgcgatgccggcgcttgacatcactcctgaggaggccagc
gaattacgcttcggccgccgtatcgagcgtacaatcagcgagcccactgccgccattgtg
ccgcaaacgcatgatgtggcggcgattatcgagcgtgccaacgctcatcaggccaagccg
gtcaccgtattccccctcgcgtaa
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