Bifidobacterium longum NCC2705: BL0092
Help
Entry
BL0092 CDS
T00094
Name
(GenBank) probable DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
blo
Bifidobacterium longum NCC2705
Pathway
blo03420
Nucleotide excision repair
blo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
blo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BL0092
03430 Mismatch repair
BL0092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blo03400
]
BL0092
Enzymes [BR:
blo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BL0092
DNA repair and recombination proteins [BR:
blo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BL0092
MMR (mismatch excision repair)
Other MMR factors
BL0092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AAN23957
UniProt:
Q8G7Z2
LinkDB
All DBs
Position
110000..111574
Genome browser
AA seq
524 aa
AA seq
DB search
MEQAQGILEGLDERQRTAATTLQGPVRIIAGAGAGKTRTVTRRIAYACATGAWKPERVLA
VTFSVKAAAEMRARLGQLGVGGGTGRSGSGAGTAGVTAATFHSAALHQLNSVWADICEAP
FPHVIEDQRDVVSRAIIRATARTDADPLTVRDVLAEINWAKISLVSVEDYARACAIAHRQ
PPAGLDTARFADVYSAYEQEKTSRGEIDFDDILLLVCHIMDGFPEAAAQIRSTIGWLTVD
EYQDVSPLQHRLLTLWLGGGGPDGKSAMNRNVCVVGDPAQTIYSFAGASSWDLLRFADEF
GPLAADVNLNTDYRSTPEVVNLANRVLAAAPNREDYLKLVSARESGPRVTRTAYESDMEE
AQGVAARIARLVANGAKPSDCAILTRINAQQPVFGAALRAARLKYRVRKDSGWQSSALAD
DAASKRALLEAMGLDATGLAANDDLGVTISTIHASKGLEFKHVFLIGCSEGLLPYGSPET
GDALEEERRLMYVGITRAEDSLHLSYARTKDGYGAQRRRPSRFL
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggcgcaggggattcttgaggggctcgatgagcggcagcgtaccgccgcgact
acgttgcaagggccggtgcgcattatcgccggcgcaggtgccggtaaaacacgcacggtc
acgcggcgaatcgcctatgcctgcgccaccggggcatggaagccggagcgggtgcttgcc
gtcaccttttcggtaaaagcggcggcggaaatgcgcgcacgattgggccagctcggcgta
gggggaggtactggacgttccggttcgggtgcgggaactgccggagtcacggccgcgacc
ttccactcagcggcattgcatcagctcaacagcgtctgggcagacatatgcgaggctcca
tttccgcatgtgatcgaagatcagcgtgacgtcgtctcccgcgcgatcatccgcgccacc
gcacgtaccgatgccgatccgctgaccgttcgcgatgtgctcgccgaaatcaattgggcc
aaaatctcgttggtgtcggtggaagattatgcccgggcatgtgccatcgcccataggcag
ccgcccgccggactcgacaccgctcggttcgccgacgtctacagcgcctacgagcaggaa
aagacctcgcgtggcgaaatcgattttgacgatattctgttgctcgtatgccatatcatg
gatggttttcccgaagccgccgcccaaattcgttccaccatcggctggctcaccgtcgac
gagtatcaggacgtctcgcccctgcaacacaggctactgaccctgtggctgggcggggga
ggacctgacggcaagagcgcaatgaaccgcaacgtatgcgtcgtgggcgatccggcccag
accatctactcgtttgccggtgcttccagctgggatctgctgcgtttcgccgatgaattc
gggccgctcgccgccgatgtcaatctcaacaccgactatcgttcgacgccggaagtcgtg
aacctcgccaaccgggtgcttgcggccgcgccgaaccgtgaggattacctgaaactggtt
tccgcccgtgaatccggtccgcgcgttacccgaaccgcttatgagagcgatatggaagag
gcacagggcgtggcggcacgcatagcccggttggttgccaacggggccaagccgtccgat
tgcgcgatcctcacccgcatcaacgcccaacagccggtattcggtgccgccttgcgcgct
gcgagactgaaatatcgcgtccgcaaggattcgggatggcaatcatccgcgctcgccgac
gatgccgcgtccaaacgcgcactattggaggcgatgggtttggacgccaccggacttgcc
gcaaacgacgatctcggggttacgatttccacgatccacgcatccaagggtctggaattc
aagcacgtgtttctgatcggctgttcggaagggctcttgccgtatggttcgccggaaacg
ggggatgcgctggaagaggaacgccggcttatgtatgtgggcatcacccgagctgaggat
tcgctgcatttgtcgtatgcacggaccaaggatggttatggagcgcagcgcagacgccca
tcacgatttttgtga
DBGET
integrated database retrieval system
