Bifidobacterium longum NCC2705: BL0127
Help
Entry
BL0127 CDS
T00094
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
blo
Bifidobacterium longum NCC2705
Pathway
blo03030
DNA replication
blo03430
Mismatch repair
blo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
blo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BL0127 (dnaE)
03430 Mismatch repair
BL0127 (dnaE)
03440 Homologous recombination
BL0127 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blo03032
]
BL0127 (dnaE)
03400 DNA repair and recombination proteins [BR:
blo03400
]
BL0127 (dnaE)
Enzymes [BR:
blo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BL0127 (dnaE)
DNA replication proteins [BR:
blo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BL0127 (dnaE)
DNA repair and recombination proteins [BR:
blo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BL0127 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
tRNA_anti_2
DUF655
DUF5487
Motif
Other DBs
NCBI-ProteinID:
AAN23992
UniProt:
Q8G7V8
LinkDB
All DBs
Position
151854..155423
Genome browser
AA seq
1189 aa
AA seq
DB search
MVERMADYGNNFVQLHNHTHYSLLDGASKIPDLAKRAAELGMPAVGITDHGNMHGAYEMY
TNCVANGVKPIIGIEAYVTPETARQDKSRVHWGTEAQRRDDVSGGGLITHLTMWAENDEG
LVNLIKASSVANLEGRVMRYPRMDKEVLATYSKGVIASSGCPSGIIQTRLRLGQFDEALR
AAGEFQDIFGKDNFFIELMDHGLPIETQVTGDLLTIAKKLNAPLLATNDSHYVHAEDAGA
QDAMLCINSGSRLDDPDRFKFDGTGYYIKTAEEMRELFKDHPDACDNTLVIAERCNVMFD
DHEDGAFMPKFPCPEGWDETSLFLKKVEEGLEKRYDGNPPLDVLKQADYECGVICQMQFC
GYFLVVADYIQWAKDHGIMVGPGRGSAAGAMVAYSMGITELDPLKHGLIFERFLNPERVS
LPDIDVDFDPEGRARVIEYCGEKYGTDKVAQCVIYGTIKTKQALKDSARIMGYEFSVGEK
ITKALPPAATGGKDISLHDIFDPAAKRYAEAREFRELYDSDPDTKRITEEAKGIEGLIRQ
TGVHACATIMGSAPITDTSPLLERTDGTITTTFEYHTCETLGLVKMDFLGLSNLTIIHDT
LKNIEANGKPAIDYTKIPLDDAETYKLMSRGDTLGVFQLDSDGMRSLLKTLKPDNFNDIS
ALIALYRPGPMSMDSHTNYAKRKNGLQKITPIHPELEEPLKQVLDETYGLIIYQEQVQSA
ARILAGYSLGKADVLRRAMGKKKPEVLAKEKVPFFAGMKEHGYSEEASQAVWDILVPFSG
YAFNKAHSAAYGLISYWTAYLKTHYPVEFMAALLQGAATNKDKTALYLGEARRMGIQVLS
PDVNESVYEYSAVGDVVRFGLGAIRNVGDKAVADIIAEREGPRGKFVNFMDFIRRVPLTA
LNRRLVESLIKAGAFDSIDPNRRALLTVHEAAIDSVVSLKRKQAEGQFDLFSDAEDGGAE
AMGDASVTVPDLEEWDKKTKLNFEREMLGLYVSDHPLSGMQSILASLREMSIAHLVDRAK
TMGEGQQVTLAGLVTNVDRRVSKKGNPWAIVTIEDMESSIQCMFFGKVYEAAAAELAVDA
IVQIRGQVELRDETVSLRATEMQIPTLEAEDERPLVITLPPVALERQRMMQLGQVLANHP
GYCEVHLAVLDEKGNAQVLTFGDRFRVKRDTSLFAEIKILFGPSCLPAA
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggtagagcgcatggctgattacgggaacaactttgtgcaactgcataaccacacgcac
tattcgctgctcgatggtgcgtcgaagattccggatttggccaaacgcgccgccgaactt
ggcatgcctgcggtcggcatcaccgaccatggcaacatgcatggcgcctacgagatgtac
accaactgcgtggccaatggcgtcaagcccatcatcggcatcgaagcttatgtgaccccg
gaaaccgcacgtcaagacaagtcccgcgtgcattggggtaccgaagcccagcgccgcgac
gacgtttccggtggtggtctcatcacccacctgaccatgtgggcggaaaacgacgaaggc
ctggtcaacctcatcaaagcctcgtccgtggccaaccttgaaggccgtgttatgcgctac
ccgcgtatggataaggaggtgctcgccacctattccaaaggcgtgatcgcatcctccggc
tgcccctcgggcatcatccagacccgtctgcgcctcggtcaattcgatgaggccctgcgc
gccgccggcgaattccaggacatcttcggcaaagacaacttcttcatcgaacttatggat
cacggtctgcccatcgaaactcaggtgaccggtgacctgctgaccatcgccaagaaactc
aacgcaccactgctggccaccaacgattcccactacgtacacgccgaagatgccggcgca
caggacgccatgctctgcatcaactccggttcccgtcttgacgatccggaccgattcaag
ttcgacggcaccggctactacatcaaaaccgccgaagagatgcgcgaactgttcaaggac
cacccggacgcctgcgacaatacgctcgttatcgccgaacgctgcaacgtgatgttcgac
gaccacgaagacggcgcgttcatgccgaaattcccttgccccgaaggctgggatgagacc
tccctgttcctcaaaaaagtcgaggaaggtctggagaagcgttacgacggcaacccgccg
ctcgacgtattgaagcaggccgactacgaatgtggtgtgatctgccagatgcagttctgc
ggatacttcctcgtggtcgccgactacattcagtgggccaaggaccacggcattatggtg
gggccgggccgtggttcggccgcaggcgccatggtcgcctattccatgggcattaccgag
ctcgatccgctcaagcatggcctgattttcgagaggttcctgaaccctgagcgagtgagc
cttcctgatatcgatgtcgacttcgaccctgaaggtcgtgcgcgagtcatcgaatactgc
ggcgaaaaatacggcaccgataaggtcgcccagtgcgtgatctatggcaccatcaaaacc
aagcaggccctgaaagactccgcccgcatcatgggttatgaattctcagtcggtgaaaaa
atcaccaaggcgctgcctccggcggccaccggcggcaaagacatcagcctgcatgacatc
ttcgaccctgccgccaaacgttatgccgaggccagggaattccgagaactctacgattcc
gacccggacaccaagcgcatcaccgaagaagccaagggtatcgaaggcctgatccgacag
accggtgtacatgcctgcgccaccatcatgggtagcgcacccatcaccgacacctcgccg
ttgctggaacgcaccgatggcaccatcaccaccaccttcgaataccacacgtgcgaaacg
ttggggctggtcaagatggacttccttggcctgtccaacttgacgatcatccacgacacc
ctgaagaacatcgaggccaacggcaaacccgccatcgactacaccaagattccgctcgat
gacgccgaaacctacaaactcatgtcccgaggagacacgctcggcgtgttccagctcgat
tccgacggcatgcgttcactgctgaaaaccctgaagcccgataacttcaacgatatttcc
gcacttatcgccctgtaccgaccgggcccgatgagtatggattcgcacaccaactatgcc
aagcgcaaaaacggcctgcagaagatcacgccaattcaccctgagcttgaggagcctctg
aagcaggtgcttgacgagacctatggtctgatcatctaccaggagcaggtgcagtccgcc
gcccgaatcctcgccggttattcactgggcaaggcagacgtgctgcgtcgagccatgggt
aagaagaagcccgaagtgctggccaaggagaaggtgccgttcttcgccggtatgaaggag
cacggatattccgaagaggcatcccaggccgtgtgggatattctggtgccgttctccggc
tacgctttcaacaaagcgcactccgccgcatacggtctgatctcctactggaccgcatat
ctgaagacgcactacccggtcgagttcatggccgccctgttgcaaggtgccgccaccaac
aaagacaagaccgcactgtacttgggcgaggcccgccgcatgggcatccaggtgctctcg
ccggacgtcaacgaatcggtgtacgagtactcggcagtcggcgacgtcgtccgattcggt
cttggtgccatccgtaacgtgggtgacaaggccgtggccgatatcatcgccgaacgcgaa
ggcccgcgcggcaagttcgtgaacttcatggacttcatccgccgcgtgcccctgaccgcg
ctgaaccggcgattggtcgaatcgttgatcaaggccggtgccttcgactcgattgacccg
aaccgtcgcgcgctgctcaccgtgcacgaggccgccatcgattcggtggtgagtctgaag
cgcaaacaggcggagggccagttcgatttgttctccgatgccgaggatgggggagcggag
gccatgggcgacgcttccgtgaccgtacccgatcttgaggaatgggacaagaagaccaaa
cttaacttcgaacgcgaaatgttgggcctgtatgtgtctgaccatccgctctccggtatg
cagtcgattctcgcgtccttgcgtgaaatgtccatcgcgcatctggttgatcgagccaaa
acgatgggtgaaggacagcaggtcacgttggctggtttggtcaccaatgtggaccggcgc
gtatccaagaagggcaacccctgggccatcgtgaccatcgaagacatggaaagctccatc
caatgcatgttcttcggcaaggtctatgaagcggccgccgccgaacttgccgtggacgcc
atcgtacagattcgcggccaagtggagttgcgcgacgaaaccgtttctctgagagccacg
gaaatgcagattccgaccttggaagccgaggatgaacgtccgttggtcatcacgctgccg
ccggtggcgttggagcgccaacgcatgatgcaactcggtcaggtgctcgctaatcatcct
ggttactgcgaagtacatcttgcggtgctggatgagaagggtaacgctcaggtgctcacg
tttggcgatcgtttccgcgtcaagcgagatacttcgttgtttgctgagatcaagattctg
tttggccccagctgcttgcctgccgcctga
DBGET
integrated database retrieval system
