Bifidobacterium longum NCC2705: BL0702
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Entry
BL0702 CDS
T00094
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
blo
Bifidobacterium longum NCC2705
Pathway
blo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
blo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BL0702 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blo03400
]
BL0702 (uvrA)
DNA repair and recombination proteins [BR:
blo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BL0702 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BL0702 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_16
AAA_29
RsgA_GTPase
AAA_21
AAA_23
AAA_15
APS_kinase
Mtrc-MtrF_II-IV_dom
DnaJ_CXXCXGXG
Cytochrome_C7
IIGP
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
AAN24521
UniProt:
Q8G6E1
LinkDB
All DBs
Position
476751..479786
Genome browser
AA seq
1011 aa
AA seq
DB search
MAVAAMQTGARRATSATGAKTGKGKNGEVIVEKVMTSDSFLSREIKKAPLIEHDGSLVAD
ISHIPNDLKITIQGAREHNLKNVDLAIPRNRMVVFTGLSGSGKSSLAFDTLFAEGQRRYV
ESLSAYARQFLGQMDKPDVDFIEGLSPAVSIDQKTTNRNPRSTVGTITEIYDYLRLLFAR
TGIPHCPECGEPVASQTPQQIVDTLLGYPERTRFQILSPVVKGRKGEFVDMIELLRSDGY
ARALIDGEMTQLSDDIKLTKQKKHTIEVVVDRLVVKDGIRQRLTDSVETALKLANGSIVI
DFVDEEEGSPARRQPFSEHRSCPNGHTLELDEVEPRTFSFNAPYGACPACTGLGFKLEID
PDLIISDPDKSLADGVIEPWSGTKMTSQYYGHILEGLAKEMGFSMKTPWKGLPDDVKHDI
LYGHDFKVNVSYRNRWGRLREYSTGFEGVIRTLMRRHDETDSQSMREYYESYMREVPCQV
CHGRRLKPEVLAVTVDGKSIFDVCDMPVVRELAWINGLKLEGSAQLIAGEVLKEIKARLG
FLNDVGLDYLTLSRAAATLSGGEAQRIRLATQIGSGLVGVMYVLDEPSIGLHQRDNERLI
ETLHHLRDLGNTLIVVEHDEDTIRRADWVVDIGPGAGERGGEVIYSGPAKHLIEAKRSIT
GDYIAHRREIAVPAKRRKIHKTQVLKVVGARENNLKNIDVSFPLGVLTVVTGVSGSGKSS
LVNTILYPVLADKLNGARIVPGRHTRVEGVDQVRKVIHVDQNPIGRTPRSNPATYTGVWD
KIRTLFAKTPEAQVRGYGPGRFSFNVKGGRCEACHGDGTLKIEMNFLPDVYVDCEVCHGK
RYNRETLEVTYNGKTVADILNMPIEEAADFFKAYTGISRYLKTLVDVGLGYIRLGQPAPT
LSGGESQRVKLATELQRRSDGKTVYILDEPTTGLHFEDVNKLLKVLQSLVDKGNTVIVIE
HNLDVIKEADWLIDLGPEGGDGGGTIVTQGTPEQVAECEASWTGKFLKPML
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
gtggctgtggcggcaatgcagactggcgcaaggcgcgcaacaagcgcaacgggcgcgaaa
accggcaagggcaagaacggtgaggtcatcgtcgaaaaggtgatgaccagcgactccttc
ctgagccgggagatcaaaaaggcgccgctgattgaacacgatggttcgctggtagctgat
atctcgcacatcccgaacgatctcaagatcacgattcagggtgcgcgcgaacacaacctc
aagaacgtcgacctggcgattccgcgcaatcgcatggtcgtgttcacaggcctgtccggt
tcgggcaaatcctcgctcgcgtttgacaccctgttcgccgaaggccagcgacgctacgtc
gaatccctatccgcctacgcccgccagttcctgggtcagatggacaagcccgacgttgac
ttcatcgagggcctgagcccggccgtctccatcgaccagaagaccaccaaccgcaacccg
cgttctaccgtcggcaccatcaccgaaatctacgattacctgcgactgctcttcgcccgc
accggcatccctcactgccctgaatgcggcgagcccgtcgcctcccagaccccgcagcag
atcgtcgacacgctgctcggctacccggagcgcactcgattccagattctctcgcccgtg
gtcaagggccgcaagggcgagttcgtggacatgatcgagctgctgcgctccgacggctac
gcccgcgcgctcatcgacggcgagatgacgcagctgtccgacgacatcaaactcaccaag
cagaagaagcacaccatcgaggtcgtggtcgaccgactcgtggtcaaggacggcatccgc
caacgcctgaccgactcggtggaaaccgccctcaagctcgccaacggcagcatcgtcatc
gacttcgtggacgaggaggaaggcagcccggcccgccgccagccgttctccgaacaccgc
agctgcccgaacgggcacacgctcgaactcgacgaggtcgagccgcgcaccttctccttc
aacgccccctacggtgcctgccccgcctgcaccggtctcggcttcaaactggaaatcgac
ccggatctcatcatctccgacccggacaagtcactggccgacggcgtcatcgaaccgtgg
agcggcaccaagatgacctcccagtactacggccacatcctcgaaggtctggccaaggaa
atgggcttctccatgaagaccccttggaagggcctgccggacgacgtcaagcacgacatc
ctctacggccacgacttcaaggtcaacgtctcctaccgcaatcgctggggacgcctgcgc
gaatactccaccggcttcgaaggcgtgatccgcacgctcatgcgacgccacgacgaaacc
gattcgcagtccatgcgcgaatactacgagtcgtacatgcgcgaagtgccctgccaggtc
tgccacggacgccgtctgaagcccgaagtgctcgctgtcactgtggacggaaaatccatc
ttcgacgtgtgcgacatgcccgtcgtacgcgaactcgcctggatcaacggcctgaaactc
gaaggctcggcacagctgatcgccggcgaagtgctcaaggagatcaaggcccgactcggc
ttcctgaacgacgtcggcctcgactacctgaccctctcgcgcgcggccgccaccctgtcc
ggcggagaagcgcagcgcatccgactcgccacgcagatcggctccggtctggtcggcgtc
atgtacgtgctcgacgagccgtccatcggcctgcaccagcgtgacaacgaacgcctcatc
gaaaccctgcaccacctgcgcgatctcggcaacacgctgattgtcgtcgaacacgacgag
gacacgatacgccgcgccgactgggtggtcgacatcggccccggcgccggcgaacgcggc
ggcgaagtcatctactccggccccgccaagcacctcatagaagccaagcgctccatcacc
ggcgactacatcgcccaccggcgagagatcgccgtgcccgccaagcgccgcaagatccac
aagacccaggtgctcaaagtcgtgggtgcccgcgagaacaacctcaagaacatcgacgtg
agcttcccgctcggcgtgctcaccgtggtcaccggcgtctccggctccggcaaatcctcg
ctggtcaacacgatcctctacccggtgctcgccgacaagctcaacggtgcacgcatcgta
cccggccgccacacgcgcgtggaaggcgtggaccaggtgcgcaaggtgatccacgtcgac
cagaacccgatcggccgcacgccgcgatccaaccccgccacctacaccggtgtgtgggac
aagatccgcaccctgttcgccaagactcccgaagcccaggtgcgcggctacggccccggc
cgcttcagtttcaacgtcaaaggcggccgatgtgaggcctgccacggtgacggcacgctg
aagatcgaaatgaacttcctgcccgacgtctacgtggactgcgaggtctgccacggcaaa
cgatacaaccgcgagaccctcgaagtcacgtacaacggcaagaccgtggccgacatcctc
aacatgcccatcgaggaggccgccgacttcttcaaggcgtacaccggcatctcccgatac
ctgaagaccctcgtggacgtcggcctcggctacatccgactcggccagcccgcacccacc
ctgtccggcggtgaatcgcagcgcgtcaagcttgccaccgagctgcagcgccgatccgac
ggcaaaaccgtgtacatcctcgacgagccgaccaccggcctgcacttcgaagacgtgaac
aagctgctcaaggtgctgcagtccctggtggacaagggcaatacggtcatcgtcatcgaa
cataatctggatgtgatcaaggaggccgactggctgatcgatctcggtccggagggcggc
gacggaggcggcaccatcgtcacgcagggcacgcccgaacaggttgccgaatgcgaagcc
tcatggaccggcaagttcctgaaacccatgctttag
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integrated database retrieval system
