Bifidobacterium longum NCC2705: BL0890
Help
Entry
BL0890 CDS
T00094
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
blo
Bifidobacterium longum NCC2705
Pathway
blo03420
Nucleotide excision repair
blo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
blo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BL0890 (pcrA)
03430 Mismatch repair
BL0890 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blo03400
]
BL0890 (pcrA)
Enzymes [BR:
blo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BL0890 (pcrA)
DNA repair and recombination proteins [BR:
blo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BL0890 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
BL0890 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AAN24703
UniProt:
Q8G5W2
LinkDB
All DBs
Position
complement(678888..681533)
Genome browser
AA seq
881 aa
AA seq
DB search
MYDEPEVIARSAQELVGDLNPQQAEAVQYRGQALLIGAGAGSGKTRVLTRRIAWILSQFG
AWPSQILAITFTNKAAAEMRERLGSLIGPVAQRMWVSTFHSACVRILRRDGKSIGLKSGF
SIYDSADSERLVKIIATEFNLDIKRYTPRSILGHISDLKNNLTGWKENLAVHAPDFTPGQ
RGYQFGTVGDLEAIYAVIYAEYEHRLALANAVDFDDLIGRTVELLRTDPAVAEYYHHRFR
YILVDEYQDTNHAQYVLVRELAGVDTGEKAIPGAPNAGKSGPAWITVVGDSDQSIYAFRG
ADIRNIQDFEQDFPNAKTIMLEQNYRSTQTILDAANAVISNNEGRKPKKLWTALGKGEPI
VGYAADNAQQEAQWVATEIARLHAEAGIAYSDMAIMYRANAQSRSLEEALINTNQPYQLV
GGTKFYERREIKDALAYLQALVNPDDDVNLRRILNVPKRGLGDRAEGVLLAYAREHGTSF
FYALMHLDEIEVPTRTATSLRAFRDLMGALSQFTRAHDSKPSEIVAEVLEKSGLRAELEK
SVDPQDASRLENLSQLQSTAAEFEQNTPDATLSAFLETTALVADSDQLPGEAEDSGKVTL
MTLHTAKGLEYPVVFLTGMEQGTFPHSRSMEDTTELQEERRLAYVGITRAKQRLYVTRAA
VRSQWGQAADMMPSQFLDEIPDSLIDWKRREAGVERMRASWETDGFADDLGGWDDDDFGG
AAFGGSSTFGSRGSSGSGSSYGSRSRYGSSYGSGSGSSSYGSRSSSYGSRSGSSSYGSRS
RSRPGSSSGSYGGTRGGKVTTRRTAPKSDSTGSAVPSSKLTKDNGLNIADFAVGDMISHD
QYGLGKVTDAQDKGRNSVITVDFGSAGVKRLMLRVAPIEKL
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
gtgtacgacgagccggaagtcatcgcacgcagcgcacaggaactcgtgggcgacctgaac
ccgcagcaggcggaagccgtgcaataccgcggtcaggcgctgctgatcggagccggtgca
ggctccggcaaaacccgcgtgctgacccgccgcatcgcctggatcttgagccagttcggc
gcatggccgagccagattctagccatcaccttcaccaacaaggccgccgccgaaatgcgc
gaaagactcggctcgctgatcggcccggtggcccagcgcatgtgggtctccaccttccac
tccgcctgcgtgcgcattctgaggcgcgacggcaagtccatcggactcaagtccggcttc
tccatctacgattccgccgactccgagcgactcgtcaaaatcatcgccaccgaattcaac
ctcgacatcaagcgctacactccacgctcgattctcggccatatctccgacctcaagaac
aatctgaccggttggaaggaaaacctcgccgttcacgcgcccgacttcacgcccggccag
cgcggctaccagttcggcacggtgggcgaccttgaagccatctacgcggtgatctacgcc
gaatacgagcatcgcttggccctggccaacgccgtcgacttcgacgatctgatcggccgc
acggtcgagttgctgcgcactgacccggccgtcgccgagtactaccatcaccgcttccgt
tacattctggtcgacgagtatcaggacaccaaccacgcccagtacgtgctcgtgcgcgag
ctggccggcgtggacacgggggagaaggccatcccgggcgcgcctaacgccggcaagtcc
ggccccgcctggatcaccgtggtgggcgattccgaccagtccatctacgcgttccgtggt
gccgacatccgcaacattcaggacttcgagcaggacttcccgaacgccaagaccatcatg
ctcgaacagaactatcgttcgacgcagaccattctggatgcggccaacgcggtgatcagc
aacaacgagggccgcaagcccaagaaactgtggaccgcgctcggcaagggcgagccgatc
gtcggctacgcggcggacaacgcccagcaggaggcccagtgggtggccaccgaaatcgcg
cgcctgcacgccgaagcgggcatcgcctactccgacatggcgatcatgtaccgcgccaac
gcccaatcccgctcgctcgaagaggcgctgatcaacacgaatcagccgtatcagctcgtc
ggcggcaccaagttctacgaacgtcgcgaaatcaaggatgcgctggcctatttgcaggcg
ctcgtcaatccggacgacgatgtgaatctacgccgtattctcaacgtgcccaagcgtggg
cttggcgaccgcgccgaaggcgtgctgctcgcctacgcgcgcgagcatggcaccagcttc
ttctacgcactcatgcacttggatgagatcgaggtgccgacacgcaccgccacctcgcta
cgagcattccgcgatctgatgggcgcgctctcgcagttcacgcgcgcgcacgactccaag
cccagcgagatcgtggccgaagtattggagaagtcgggcttaagggccgaactcgagaaa
tccgtggacccgcaggacgcctcccgtctggagaacctctcccagctgcagtccactgcc
gccgaattcgaacagaacacgcctgacgccacgttgtccgcattcctggagaccaccgcg
cttgtggccgactccgaccaactacccggcgaggcggaggactccggcaaggtgacgctt
atgaccttgcacaccgccaagggcctcgaatacccggtggtgttcctgaccggcatggaa
cagggcaccttcccgcattcgcgttcgatggaagacaccactgaactgcaggaggaacgc
cgactcgcctatgtgggcatcacgcgcgccaagcagcgactgtatgtcacgcgcgccgcc
gtccgctcccagtggggccaggccgccgatatgatgcccagccagttcctcgacgagatt
ccggattcgctgattgattggaaacgccgtgaagccggcgtggagcgtatgcgcgccagc
tgggagaccgatggattcgccgacgatttgggcggctgggatgatgacgatttcggcggc
gccgcgtttggcgggtcgtcgacgttcggctcgcgtggttcgtccggttcgggttcgtcc
tatgggtcgcggtcgcggtatgggtcgtcgtatggctcgggttccggctcttcgtcgtat
ggttcccgttcatcgtcgtatggttcccgctccggctcgtcctcctatggttcccgctcc
cgttcccgtcccggttcttcgtccggttcatatggtggcacccgtggcggcaaggtcacc
acgcgccgtaccgcaccgaaatccgattcgaccggctctgccgtgcctagctcgaagctc
accaaggacaatggcctgaatatcgccgacttcgccgtgggcgacatgatcagccacgac
cagtacggtctcggcaaggtcaccgacgcacaagacaagggccgcaattcggtaatcacc
gtggacttcggctccgccggcgtcaaacgcctcatgctccgcgtagcgccgattgagaag
ttgtag
DBGET
integrated database retrieval system
