KEGG   Bifidobacterium longum NCC2705: BL0948
Entry
BL0948            CDS       T00094                                 
Name
(GenBank) narrowly conserved hypothetical protein
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
blo  Bifidobacterium longum NCC2705
Brite
KEGG Orthology (KO) [BR:blo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:blo03016]
    BL0948
Enzymes [BR:blo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     BL0948
Transfer RNA biogenesis [BR:blo03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    BL0948
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC
Other DBs
NCBI-ProteinID: AAN24760
UniProt: Q8G5Q6
LinkDB
Position
complement(754145..755446)
AA seq 433 aa
MSDVRDTEPRLLKEPRGGVPDVTSTLDGYHRVCDALAEATGSLAADAERASGFRYGHEDW
LIQFKREGAGIALLDPVALTRAGADWNEFNDAVGDATWILHDSLMDLPGFAEIGLKPKAL
FDTEIAARLLGLHRFGLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIE
LETMMRRDLKAAGKDEWAAEEFSHALVAGLAPRKPHPIPWLRISRITQLSRDPRGLAIAK
SLWEERDRLARQYDIAPSLLLADSSIIEAATNKPHNAAQFRALRSLNERVRIHTGTEQDK
MFERYAPIQRAVKPKVWKQAIDRAMALKPTQWPTMPAPEQDENGVVNAPRSMRLWQQRHP
ERYDRLQRVRRVINRIAEDTRTPAEMIIKPQILRNLCWVGDPVEVDVETFLIEQGARNWQ
VKLIAPSVSGVIM
NT seq 1302 nt   +upstreamnt  +downstreamnt
ttgagtgacgtccgtgacaccgaaccccgactgctgaaagagcctcgcgggggagtaccc
gatgtcacttcgacgctggacggctatcatcgtgtctgcgatgcgctggccgaggcgacg
ggctcgctggccgccgacgccgaacgggcgtccggcttccgctatgggcacgaggattgg
ctgattcagttcaaacgtgagggtgcaggcatcgccttgcttgatcccgtcgccctgacc
cgggccggagctgattggaatgaattcaatgacgccgtgggcgacgccacgtggattctg
catgattctctgatggacttgcccggattcgccgaaatcgggctcaaacccaaagccctg
ttcgacacggaaatagcggcgcgattgctcggcctgcaccgcttcggtctggccgccgtc
accgaacactacctcggcatcacgctagccaaagagcattccgccgccgattggtcctac
cgtccgctgccgcgcgactggcgcaactatgcggcgctcgacgtggaggtgcttatcgaa
cttgaaaccatgatgcgtcgtgacctgaaagccgcaggcaaggacgagtgggccgctgaa
gagttttctcacgctttggttgcgggccttgccccgcgcaaaccgcatccgattccttgg
ctgcgtatctcgcgcatcacccagctgagtcgtgatccaaggggcttggccatcgccaaa
tccctatgggaggagcgcgaccgactcgcccggcaatacgatattgcgcccagcctgtta
ttggccgattcatcaatcatcgaggcggcgaccaacaagccgcacaatgctgcccaattc
cgcgcgctccgatccctgaacgagcgtgtgcgcatccataccggcaccgagcaggacaaa
atgttcgagcggtacgcgccgattcagcgtgcggtcaaaccgaaggtctggaagcaggcc
atcgatcgagccatggccctgaagcccacccaatggcctaccatgcccgcccccgaacag
gatgaaaacggtgtggtgaacgcgccccgatccatgcggctgtggcaacagcgccatccg
gagcgttatgaccgtctgcaacgggtgcggcgtgtgatcaaccgcatcgccgaagacacc
cgcacgccggccgagatgatcatcaagccacagatcctacgcaacctgtgctgggtggga
gacccggtggaagtggacgtcgagacgttcctgatcgagcagggcgcaaggaactggcaa
gtgaaactcattgcaccgtccgtaagtggcgttatcatgtag

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