Bifidobacterium longum NCC2705: BL1153
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Entry
BL1153 CDS
T00094
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
blo
Bifidobacterium longum NCC2705
Pathway
blo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BL1153 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blo03019
]
BL1153 (recQ)
03400 DNA repair and recombination proteins [BR:
blo03400
]
BL1153 (recQ)
Enzymes [BR:
blo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BL1153 (recQ)
Messenger RNA biogenesis [BR:
blo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BL1153 (recQ)
DNA repair and recombination proteins [BR:
blo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BL1153 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RQC
RecQ_Zn_bind
ResIII
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
AAN24958
UniProt:
Q8G567
LinkDB
All DBs
Position
complement(1001242..1003197)
Genome browser
AA seq
651 aa
AA seq
DB search
MTAHQAALEALTRYFGYDSFRPGQQGIVEALLAGRDVLGVMPTGAGKSVCYQIPAALSPG
MTLVISPLISLMRDQVDALNDLGLPAAFINTTQTPDEQAMVFAQAAAGQIKLLYVAPERL
ETGRFRDFAARTPISLIAVDEAHCVSQWGQDFRSSYLGIGDFIAGLPQRPPVGAFTATAT
ERVRRDIVGLLGLRNPAVTVTGFDRPNLYFDVVKLETKYKAAWVARYVADHPDESGIVYC
ATRKTTEALTDTLNQMGHPAVAYHGGMSPDAREAAQRDFITDKVPVVVATNAFGMGIDKS
NVRYVIHHNLPESIEAYYQEAGRAGRDGEPSRCTLLWNESDIVTRRRLLDNDYENERLTP
EEQEIVRQSKRRLLDGMVGYCRTTDCLHRYMTRYFGQELSPNAGSTAGEDIAADSSQSGK
CGACSNCESTFETIDVTRVAQAISRCVHDVGQRVGSGKIVKILRGSRAQDLAWLNPERMP
TFGMLKDVNEARVRDVLSQMATDGYLSIAEGRMPIVMFGARAAETAAPDFHYEIKRVERK
SEAAGSGRSGGVADTADSANVPGDALGSYIPDDDEESLFQKLRELRRTIAQEIGKPPYIV
FSDKTLRDMARIKPVTNAQFLAVNGVGQHKLDLYGQRFMQAIASFNAGSAS
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgacagcacatcaggcggcgctggaggcgctcacacgatacttcggctatgactcgttt
aggcccggacagcaaggaattgtcgaggctttgcttgccggacgcgatgtcttgggcgtg
atgcccaccggcgcaggcaagtccgtgtgctaccagattcccgccgcgctcagcccgggt
atgactttggtcatatctcccttgatttccctgatgcgcgaccaggtcgatgcgctgaac
gacctcggtctgccggccgcgttcatcaataccactcaaactcccgacgagcaggcgatg
gtgttcgcccaagccgccgccgggcagatcaaactgctgtacgtggccccggaacgcttg
gaaaccgggcgattccgcgactttgccgcccgtacgccgatctcgctgatcgccgtggac
gaagcccactgcgtctcccagtggggtcaggacttccgctcgtcgtacttaggtatcggc
gatttcatcgccgggctgccgcagcgtccaccggtgggtgcgttcaccgccaccgccacc
gaacgggtgcgccgggacatcgtgggactgctgggattgcggaatccggccgtcaccgtt
accggattcgaccggccgaacctgtattttgatgtggtcaaactggaaaccaaatacaag
gccgcatgggtggcgcggtatgtggccgaccatccggacgaatccggcatcgtctactgc
gccacccgcaagaccaccgaagcgctcaccgacacgctgaaccagatggggcatccggcc
gttgcctaccatggcggcatgtcgccggacgcgcgtgaggcggcccagcgcgacttcatc
accgacaaggtgccggtggtcgtggccaccaacgctttcggcatgggcatcgataagtcc
aacgtgcgttacgtcatccaccacaatctgcccgaatccattgaggcctactatcaggag
gccggccgcgcgggccgtgacggcgagcccagccgatgcacgctgctgtggaatgagtca
gacatcgtcacccggcgtcggttgctggataacgattatgagaacgaacgattgactccc
gaagagcaggaaatcgttcgccagtccaagcgccggctgctggacggtatggtcggctac
tgccgcaccaccgactgcctgcaccggtatatgacccggtatttcggtcaggaattgtcg
ccgaatgctggttccacggcgggtgaagacattgcggcggactcttcgcagtccggcaaa
tgcggtgcctgctcgaactgcgaaagcacgttcgagaccatcgacgtgacccgcgtggcg
caggcgatcagccgttgcgtgcatgacgtggggcagcgcgtcggttccggcaagatcgtc
aagatcctgcgcggttcgcgggcacaggatctggcatggctgaacccggagcggatgccc
accttcggcatgctcaaggacgtgaacgaggctcgcgtgcgcgacgtgttgagccagatg
gccacggacgggtacctgtcaatcgccgaagggcgtatgccaatcgtcatgttcggtgcg
cgggcggccgaaaccgccgctcccgacttccactatgagatcaaacgggtggaacgcaag
tcggaggcggccggttccggtcggagcgggggagtggctgatactgccgattccgccaat
gttcccggcgatgcgctgggctcgtatatcccggacgatgacgaggaatcgctgttccag
aagctacgcgaactgcgacgcaccatcgcccaggaaatcggcaagccgccgtacatcgtg
ttctccgacaagaccttgcgcgacatggcccgcatcaagccggttaccaacgcgcaattt
ctggcggtcaacggcgtcggtcaacacaagctcgacctctacggccagcgcttcatgcaa
gccatcgcctcgttcaatgccgggagtgcgtcataa
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