Bifidobacterium longum NCC2705: BL1608
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Entry
BL1608 CDS
T00094
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
blo
Bifidobacterium longum NCC2705
Brite
KEGG Orthology (KO) [BR:
blo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
blo03016
]
BL1608 (truA)
Enzymes [BR:
blo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BL1608 (truA)
Transfer RNA biogenesis [BR:
blo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BL1608 (truA)
Prokaryotic type
BL1608 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AAN25397
UniProt:
Q8CY46
LinkDB
All DBs
Position
complement(2011253..2012164)
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AA seq
303 aa
AA seq
DB search
MTRLRIDLAYDGGGFYGWAKQPNLRTVQGTIEDALHKVLRVPTDDAAEPLRLTVAGRTDT
GVHASHQVAHLDVSDEVLNRCVGHMTIPVTEALTRRLKAVLPSDIVIHGIAVAPVGFDAR
FSALERTYVYRVADRSSEVDPRLRGCVLTVDEALDLELMNRAASLTIGLHDFGSFATPNP
GGTTIREVKTAYWRRVPITPLVPDEMASHEAYRTPSLESGLVVFTIVADAFARNMVRSLV
GSCIKVGSGRKSLEWFAGKMAEPVREGSSGPIAPQGLTLEHIAYPADDQLAARAEAIRAV
RTL
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgacacgactgcgcattgacttggcctacgacggcggcggattctatggctgggccaaa
cagcccaatcttcgtacagtgcaaggcaccattgaagatgcgctgcacaaggtgctgcgg
gtgccgaccgatgacgcggccgaaccgttacgcttgacagtggctggacgcaccgacacc
ggtgtacatgcctcccaccaagtggcgcatctggatgtatccgatgaggtactgaatcgc
tgcgtaggtcacatgaccattccggtcaccgaggcgctgactcgcagactcaaggctgtg
ctgccttcggacatcgtcattcatggcattgccgtagctccggtcggcttcgatgccagg
ttctccgcattggagcgcacttatgtgtatcgggtcgccgatcgttcgtctgaggtcgac
ccgcgcctgcgtggatgcgtacttaccgtggatgaagcgctggatctggagcttatgaac
cgcgcagcctcattgaccatcggcctgcacgattttggttccttcgccactccgaatccg
ggaggcactacgatccgtgaagtcaagaccgcctattggcggcgggtgccgatcactccc
ctagtaccggatgagatggcatcgcatgaagcatatcggactccgtcgctggagtccggc
ctggtagtgttcacgattgtggcggacgcctttgcccgcaatatggtgcgctccctggtc
ggctcatgcatcaaagttggttcgggacgcaaatcactggagtggtttgccggcaaaatg
gccgagccagtacgtgaaggctcaagcgggccgattgcgccgcagggcctgactttggag
catatcgcatatcccgccgatgatcagctggccgcaagagccgaggccattcgggccgta
cgtacgttgtag
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