Bifidobacterium longum NCC2705: BL1618
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Entry
BL1618 CDS
T00094
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
blo
Bifidobacterium longum NCC2705
Brite
KEGG Orthology (KO) [BR:
blo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
blo03016
]
BL1618 (truB)
Enzymes [BR:
blo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BL1618 (truB)
Transfer RNA biogenesis [BR:
blo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BL1618 (truB)
Prokaryotic type
BL1618 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
SAMD1_SHD
Motif
Other DBs
NCBI-ProteinID:
AAN25406
UniProt:
Q8CY45
LinkDB
All DBs
Position
2025387..2026550
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AA seq
387 aa
AA seq
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MLHTTPSGLLIIDKPQGVTSFDAVAAVRGALHIKKVGHAGTLDPMATGTLVIAFGHATRL
LNAIVAHDKTYEATIRLGLRTTTDDAEGEVLVDGEARSRWQTLSAQLTEGGQSGEPTALP
TASWQDLLTRTIATNFTGDIEQVPNTFSAIKINGQRAYDLAREGKDVELKPRPVTISEFT
VLDIRSGFVAGEQAAEPLREDANTGAIPALDVDVRISCSSGTYIRALARDLGKELGVGGY
LTRLRRTRVGRFALPDDASGLIAPEAMLDTRTHTVTAHTDQKTFTNREGQTVTRNKCVLD
TPEGLAGDERRNWLLDHALTMEQAARGAMPALDITPEEASELRFGRRIERTISEPTAAIV
PQTHDVAAIIERANAHQAKPVTVFPLA
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
gtgcttcatacaacacccagcggtctgctcatcatcgacaagccgcaaggcgtgaccagc
ttcgacgccgtcgccgccgtgcgcggcgcgttgcacatcaagaaggtcggtcacgccggc
acccttgaccccatggccactggcacgctggtcatcgccttcggccacgccacacgactg
ctcaacgccatcgtggcgcatgacaaaacctacgaggccaccatacgcctcggcctgcgc
accactaccgacgatgccgaaggcgaggtgcttgtcgatggtgaagcccgttcccgctgg
caaacgctatcagcgcagctgactgagggtggccagagcggcgaaccaacggcgttacca
actgcctcatggcaagacctgctcacacgcaccatcgccaccaatttcaccggcgatatc
gaacaagtccccaatacgttctccgccatcaaaatcaacggccagcgtgcctacgacttg
gctcgcgaaggcaaggatgtggaactcaaaccccgcccggtcaccatcagcgaattcacc
gtgctggatatccgcagcggattcgtagcaggggagcaggccgctgaaccattgcgggaa
gacgcgaacacgggagcgattcccgcacttgatgttgacgtgcggatcagctgttcatcg
ggcacctatatccgcgcgctcgcccgcgatctcggcaaagaacttggcgtcggcggatac
ctgacccgtttgcgccgtacgcgagtcggccgattcgcgttgccggacgatgccagcgga
cttatcgctcctgaggcgatgcttgacacgcgaacccataccgtcaccgcacataccgat
cagaagacgttcactaatcgggaagggcaaaccgtcacgcgcaacaagtgcgtattggac
actcctgaaggtcttgccggtgacgagcgccgcaactggctgcttgaccatgcccttacc
atggaacaggccgctcgaggtgcgatgccggcgcttgacatcactcctgaggaggccagc
gaattacgcttcggccgccgtattgagcgtacaatcagcgagcccactgccgccattgtg
ccgcaaacgcatgatgtggcggcgattatcgagcgtgcaaacgctcatcaggccaagccg
gtcaccgtattccccctcgcgtaa
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