Bifidobacterium longum NCC2705: BL1620
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Entry
BL1620 CDS
T00094
Symbol
radA
Name
(GenBank) alkylation damage repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
blo
Bifidobacterium longum NCC2705
Brite
KEGG Orthology (KO) [BR:
blo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blo03400
]
BL1620 (radA)
DNA repair and recombination proteins [BR:
blo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BL1620 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
Zn_ribbon_LapB
ATPase
DnaB_C
Lon_C
ChlI
ABC_tran
DUF7125
Rad51
SLFN-g3_helicase
AAA_16
EAD2
nSTAND_NTPase5
AAA_22
AAA_29
Isochorismatase
RsgA_GTPase
NACHT
NTPase_1
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AAN25408
UniProt:
Q8G3Y2
LinkDB
All DBs
Position
complement(2027787..2029325)
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AA seq
512 aa
AA seq
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MAKSSVQYVCSECGWNGPKWYGRCPECGQWGTVEEFHEARPAAGSRTAAPGRTSRTQSVT
VANNARSAARPITEVGTESVERLGTGFSEFDRVLGGGVVPGSVTLIAGEPGIGKSTLLLQ
TAGNIARVVAGDSTFRGAGQRSAQQSGRAQGNASNTVPMRGNASSTHANTVLYISGEESQ
AQVRLRASRINAVEPNLLLASTTDLSTVLGLIEQNKPALAIVDSAQTIVSQEVDGISGGS
TQVREVASALIDTAKTLDIPVFLVGHVTKDGSIAGPRTLEHLVDVVCQFEGDSETALRML
RAVKNRFGPTDEVGCFDMSGEGIEEVTDPAGLFLSGDGPDAANAAPVEGTCVTFTLDGHR
SLPIEVQALVTTSVLPTPRRAVNGVDPSRIAMLVAVLYRHSKLNLLSNDLYISTIAGGQA
KEPGSDLAIVAALASAATSKPIARATCAIGEISLTGQVRPVPRMEYRLREAARLGFTTAV
IPPLRKPVHVEGLQLVESNTLSDALDALGVRK
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatcaagtgtgcagtatgtatgttccgaatgcggttggaacgggccgaagtgg
tacggccgttgccccgagtgtggtcagtggggcacggtcgaggaatttcacgaggctcgg
ccggcggcaggctctcgcacggccgctcccggccgaacatcacgcacgcagtcggttacg
gttgccaacaacgccagatctgcagcccgtccgattaccgaagtgggcacggaaagcgtc
gagcggctcggtaccgggttttccgaattcgaccgtgtgctcggcggtggcgtggtgccg
ggttcagtaacgctgatagcgggcgaaccgggtatcggcaagtcgacattgctgttgcag
acggccggcaatatcgcgcgcgttgtggcgggagacagtacgttccgaggggcaggtcag
cggtctgcccaacagtcgggccgggcgcagggcaacgcatcgaacacggtgccgatgcgg
ggcaacgcatcatcaacacacgccaacaccgtgctgtacatttccggcgaggaatcacag
gcgcaggttcgtttgcgcgcttcccgcatcaatgcggtggagccgaacttgttactggcc
tccaccaccgacctgtccacagtattggggctgatcgaacagaacaagccggccttggcc
attgtggattcggcgcagaccatcgtctcgcaggaggtcgatggcatttccggcggttcg
actcaggtgcgcgaagtggcaagcgcgctgatagataccgctaagacacttgacattcca
gtatttctggttggtcatgtgaccaaggacggttcgattgcaggcccgcgcacattggag
catctggtcgatgtggtctgccaattcgaaggcgacagcgagactgcgctgagaatgctg
cgagcggtgaagaatcgttttggcccgaccgatgaagtcggctgtttcgacatgagcggt
gaaggcatcgaagaggtcaccgatcccgccggattgttcctgtctggagacggccctgat
gcggccaacgcggcacccgtggaaggcacctgcgtgacgttcacattggatgggcatcgc
agtctgcctatcgaagtacaggctctggtcaccacgtcggtgctgcccacaccccgtcgt
gcggtcaatggcgtggaccccagccgtatcgccatgctggtcgcggtgctctaccgtcac
agcaagctcaacctgctgtccaacgacctgtatatctccactattgccgggggccaggcc
aaggagcccggttccgacttggcgatagtggcggcactggcgagcgccgccacgtcaaaa
cccattgcgcgagccacgtgcgccattggtgagatttccctgaccggtcaggtgcgcccg
gtaccgcgtatggaatatcgccttcgcgaggccgcacgcctcggcttcaccacggcggtc
attccgccactgcgcaagccggtgcatgtcgagggacttcagctggtggagtccaacaca
ttgtccgacgcattagacgccttgggagtgcgtaaatag
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