Bifidobacterium longum NCC2705: BL1724
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Entry
BL1724 CDS
T00094
Name
(GenBank) possible helicase
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
blo
Bifidobacterium longum NCC2705
Brite
KEGG Orthology (KO) [BR:
blo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blo03032
]
BL1724
03029 Mitochondrial biogenesis [BR:
blo03029
]
BL1724
Enzymes [BR:
blo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BL1724
DNA replication proteins [BR:
blo03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
BL1724
Mitochondrial biogenesis [BR:
blo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
BL1724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
AAA_22
Pif1_2B_dom
AAA_16
Viral_helicase1
DEAD
nSTAND3
AAA_5
TrwB_AAD_bind
SH3_13
NTPase_1
AAA
MeaB
SLFN-g3_helicase
Herpes_Helicase
IstB_IS21
AAA_14
cobW
AAA_24
KdpD
ABC_tran
NAT10_TcmA_helicase
Zeta_toxin
AAA_7
TsaE
AAA_25
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AAN25508
UniProt:
Q8G3N4
LinkDB
All DBs
Position
2143955..2145373
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AA seq
472 aa
AA seq
DB search
MRQTEALAILNAGANVFLTGAPGAGKTYVLNEFIRQARADGASVAVTASTGIASTHINGQ
TIHSWSGVGVATALSASLLKLIKSRRKRKIQATDILVIDEVSMLHAWLFDMVDQVCREVR
RDPRPFGGIQVVLSGDFFQLPPVSVSGRNRDLIAPTPEFIASRERYARAGLNPEGFITES
LVWPELNPVICYLTEQHRQDTGELLTVLTDIREGDVTQSDRDVLVTRLGKLPEPGQVAVH
LFPVNRQADNLNDMRLNQIMLDPHEFHAETAGPANLVDRLKKNMLAPERLILKEGAAVMA
LRNDTDRQYVNGSLGTVRGFAQENKGGWPIVEFENGNIVTMKQATWEMMDGDTVLASVSQ
VPLRCAWGITIHKSQGMTLDRAVMDLKRTFAPGMGYVALSRVESLGGLYLAGVNERMFLV
SPDAVVLDGDLREASASASDQLADEGANAFKPAEPDEFGANPDDDFAQDALF
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaaaccgaagccctggccattctgaacgccggcgcgaacgtgttcctgaccggt
gcgcccggtgccggtaagacctatgtcttgaacgagttcatccgccaggctcgggccgac
ggcgccagtgtagcagtcaccgcgtccacaggcatcgcctccacgcatatcaacggccaa
accattcattcgtggagcggcgtcggcgtggccaccgccctgagcgccagcctgctcaaa
ctcatcaaatcccggcgcaaacgcaagattcaggccacggacatcctcgtcattgacgag
gtttccatgctgcacgcttggctgttcgacatggtcgaccaagtctgccgcgaagtacgc
cgtgatccacgcccgttcggtggcatccaggttgtcttgtccggcgacttcttccagctg
ccgccggtttcggtgtccgggcgcaaccgcgacctcatcgcccccacgcccgaattcatc
gccagtcgcgaacggtatgcccgtgccggcttgaaccccgaaggcttcatcaccgaatcg
ctggtatggcccgaactcaacccggtgatctgctatctgaccgaacagcaccgtcaggat
accggcgaactgctgaccgtgctcaccgacattcgcgaaggcgacgtgacccagtccgac
cgtgacgtgctcgtcactcgtctgggcaaactgcccgagcccggccaggtcgccgtccac
ctgttcccggtgaaccggcaggccgacaatctcaacgacatgcgcctgaaccagatcatg
cttgatccacacgagttccacgccgagacagcaggccctgctaacctggtcgaccgactc
aaaaagaacatgttggcccccgagcgattgatactcaaggaaggcgcggctgtcatggcc
ctgcgcaacgacaccgatcgccagtacgtcaacggctcgctcggcaccgtgcgtggcttc
gcacaggagaacaagggcggctggccgatcgtggaattcgagaacggcaacatcgtcacc
atgaaacaggccacatgggaaatgatggacggcgacaccgtgctcgcctccgtctcgcag
gtgccgttgcgttgcgcgtggggcatcaccatccacaagtcgcaaggcatgacgcttgac
cgtgcggtcatggatctgaagcgcaccttcgcgccgggcatgggatatgtggcgttgtcc
cgcgtcgaatcgctgggcggactgtatttggctggcgtcaacgaacgcatgttcctcgtc
tcgcccgatgccgtggtgctcgacggcgacctgcgcgaagcctcggcctcggcctccgac
cagttggccgatgaaggtgcaaacgcgttcaaacccgccgagccggacgaattcggtgcc
aatcccgacgatgacttcgcccaggacgcgttgttctga
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