Bifidobacterium longum NCC2705: BL1739
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Entry
BL1739 CDS
T00094
Symbol
vsr
Name
(GenBank) possible XorII very-short-patch-repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
blo
Bifidobacterium longum NCC2705
Brite
KEGG Orthology (KO) [BR:
blo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blo03400
]
BL1739 (vsr)
DNA repair and recombination proteins [BR:
blo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
BL1739 (vsr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
PNP_phzG_C
Motif
Other DBs
NCBI-ProteinID:
AAN25523
UniProt:
Q8G3L9
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All DBs
Position
2165994..2166509
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AA seq
171 aa
AA seq
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MGDRSFRLSFSPQRHGSLECVNRKKQPVEKYERGTRSYTMSHIRGKDTKIEVLVRSYLFR
KGLRFRKNDKRYPGHPDVVLPKYHAIVFVNGCFWHMHEGCSKHSMPKSNVEFWQAKLLRN
HNRDIAQRAELEAAGWRVITVWECELTKAVRDERLVRLYEQIVEGDADSAE
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatcgttcgttcaggctctcattctcgccgcaacgtcacggtagtctggagtgc
gtgaatcgcaagaaacagccagtggagaagtatgagcggggtacccgttcgtacacgatg
tcgcatattcgtggcaaagacaccaaaattgaggtactggtacgcagctacctgtttcgc
aaggggttgcgattccgcaagaacgacaagcgttaccccggacacccggatgtagtactg
ccgaaataccacgccatcgtgtttgtcaacggctgtttctggcacatgcatgaaggatgt
tccaaacattcgatgccgaaatcgaacgtggaattctggcaggcgaaactactgcgcaat
cacaatcgagacatcgcgcagcgagccgaactggaggccgctggctggcgtgtaattacc
gtatgggagtgcgaattaacgaaagccgtgcgcgacgaacgcctcgtacggctgtatgag
cagattgttgaaggagatgcagattcagcggaataa
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