KEGG   Bifidobacterium longum NCC2705: BL1785
Entry
BL1785            CDS       T00094                                 
Symbol
hsdR
Name
(GenBank) HsdR-like protein of type I restriction modification system
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
blo  Bifidobacterium longum NCC2705
Brite
KEGG Orthology (KO) [BR:blo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:blo02048]
    BL1785 (hsdR)
Enzymes [BR:blo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     BL1785 (hsdR)
Prokaryotic defense system [BR:blo02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   BL1785 (hsdR)
SSDB
Motif
Pfam: SWI2_SNF2 T1R_D3-like EcoR124_C ResIII HSDR_N DEAD DUF6610
Other DBs
NCBI-ProteinID: AAN25568
UniProt: Q8G3H5
LinkDB
Position
2222402..2225689
AA seq 1095 aa
MIFDSESVFEENVITVLKQHGWKDGVLRYPTERDLLDNWKDILYRNNNDIDRLGKYPLTD
GEMTQIIEQIETLRTPLALNSFVNGRTVSITRDNKEDVAHFGKEVSLYIYDRKEIAGGKS
TYQIAQQPVYPAKNKMLNSRRGDLVLLINGMPLIHIELKKSGIPVSQATNQIEKYAHEGV
FTGLFRLVQIIVAMNPDDAVYFANPGVDKFNPSYYFHWADYNNEPICGGQNPGKDEWKLF
IGGTSGTAGLLSIPMAHQLIGFYTIADSADGCLKVLRSYQYIAANAISDVVRKCDWEQRP
ATPGRPGGYVWHTTGSGKTMTSFKSAQLIADSHDADKVVFLMDRIELGTQSLKEYRSFAD
SETEVQGTENTGVLRDKLNSTNVNDTLIVTSIQKMSNVKTGERGVTQTWLDQLAERRIVF
IVDECHRSTFGDMLQNIRRSFPNALFFGFTGTPILDENQKKNSTTAMVFGRCLHRYSIAD
GIRDHNVLGFDPYMVTTYKDSEVRRAVALDKAKVESTEDALADPVKAKVFQHYMDKSEIP
MGPMVDGAGNCISGIEDFLGRDQYGIDSPHPNMVVSDILEQFPVLSHAGKFHAMLATSSI
PEAVNYYHLFKQQAPKLHVTALFDPNIDNNEGATDKEDALTEIITDYNEAFGKEFIIPTW
PAMKKDISSRLSHKSPYGGIATNRSQQLDLLIVVDQMLTGFDSKWVNTLYLDKIIDYESI
IQAFSRTNRLFGPDKPFGVIRYYRKPHTMHGFIEAAVKLYSGDRPLDLFVQKLPANVKSM
DTRYREILDVFSDNGESDLMQLPESVEARRKFAKEFVELNRYLEAAKVQGFDWSTPEYKV
DSTDTDDANEDNDEHDESEVVRPQIDERTYLILAQRYKELFYGNSSCGGDSDDGVKNNPE
APYELDGYLTEINTGLIDTDYMNANFNKWLKALKENSPELAEMSAQLHRSFAALSRDEQR
LAELFLHDVERGDVEVEAGITLRDYITRYAAREKNEQVDKLVDRLGVNRSVVEEFLAKRI
DEANINEFGRFDALRSSLDVQRAKAFFEQHDHKALPVFKVRMRATNMLKRFVLMGGFDID
DTDNTDGQSETKNEH
NT seq 3288 nt   +upstreamnt  +downstreamnt
atgatattcgatagcgaatcggtgtttgaggaaaacgtcatcaccgtgcttaagcagcat
ggatggaaggacggtgtcctgcgctatccaactgagcgggatttgctcgacaattggaaa
gacatactgtaccgcaacaacaacgacatagacaggcttggcaaatacccgctgacggac
ggggaaatgacccagataatcgagcagatcgagaccctgcgaacgccgctcgcgctcaat
tcgttcgtcaacgggcgtaccgtgtctatcacgcgtgacaacaaagaagatgtggcgcat
ttcggcaaggaagtcagtctctacatctatgaccgcaaggaaatcgcgggcggcaaaagc
acttatcagatcgctcagcaaccggtctatccagccaagaacaagatgttgaactcgcgg
cgcggcgacctcgtgcttctcatcaatggcatgccattgatccatatcgagctcaagaaa
agtggcataccggtcagccaagcaaccaatcagatcgagaaatatgcgcacgaaggtgtg
ttcaccggcctgttccgtctagtacagattattgtggccatgaaccccgatgacgccgtc
tacttcgctaatccgggtgtagacaaattcaatccaagctattacttccattgggctgac
tacaacaatgagcctatctgcggcgggcaaaaccctggcaaagacgaatggaagctgttc
atcggaggcacctccggtaccgcaggcctgctgtccattcccatggcgcatcagctcatc
ggcttctacaccatcgctgattcagcggatggatgccttaaggtgctgcgtagttatcag
tacatcgcggcaaacgccatctccgatgtggtgaggaaatgtgattgggaacagcggcca
gctaccccaggacgacccggcggctatgtatggcacaccaccggttccgggaaaaccatg
accagcttcaaatcggcgcaactcatcgccgattcgcatgacgccgataaagtcgtgttc
ctcatggaccgcatcgagctgggtactcaatcgttgaaggaataccgcagctttgccgac
agcgagacggaagtgcaaggcaccgagaacaccggtgttttgcgggacaaactcaacagc
accaatgtcaacgacactctgatcgtcacctcaatccagaagatgagcaacgtgaaaaca
ggggagcgaggcgtcacacagacctggctggatcagctagctgaacgacgtatcgtcttt
attgtggacgaatgccatcgttccacattcggcgacatgttgcagaatatccgtcgctct
ttcccaaacgcgctgttcttcggatttaccggtacgccaattctggacgaaaaccagaag
aagaattccaccactgccatggtattcggccgttgcttgcaccggtacagcatcgccgac
ggcattcgtgaccataatgtactcggattcgacccgtacatggtgaccacgtacaaggat
tctgaagtcagacgtgccgtggctctcgacaaggcgaaggtggagagtacggaagatgcg
ctcgccgacccggtcaaggccaaagtattccagcattacatggataagtctgagatcccc
atgggtccgatggttgatggcgctggaaactgtattagcggcatcgaggatttccttgga
cgagaccaatatggcatcgactccccgcatccgaacatggtggtctcggacattctcgaa
cagttcccggtgctcagccatgcgggcaaattccatgcgatgctcgccactagctccatt
cctgaagctgtcaactattatcacttgttcaagcagcaagcacctaagttgcatgtaacg
gcgttgttcgatcccaacatcgacaacaacgaaggagcaacggacaaagaagatgcgctg
actgaaatcatcaccgattacaatgaggcgttcggcaaagagttcatcatccccacatgg
ccggcgatgaagaaagatatttcgtcgcgactatcgcataagagtccgtacggcggcata
gcaacaaaccgcagtcagcagctcgatttgctcattgtcgtggaccagatgcttaccgga
tttgactcaaaatgggtgaatacgttgtatctcgacaagattatcgactacgaaagcatc
atccaggcattcagtcgcacgaatcgtctgttcggaccggacaagccgttcggtgtcatt
cgttactaccgcaaaccgcacaccatgcatggcttcattgaagcagcggtgaaactgtat
tcgggcgatcggccgcttgacctgttcgtgcagaaattgccggcgaacgtaaaatccatg
gatacgcggtaccgggaaattcttgacgtgttctcggataacggggaatcggaccttatg
cagttgccggaatcggtggaggctaggcgcaagtttgccaaggagttcgtggagctgaac
cggtaccttgaagctgcgaaagtgcagggctttgactggagtaccccagaatacaaggtc
gatagtacggatactgacgatgcgaatgaggacaatgatgagcatgacgagtctgaagta
gtgcgtcctcaaatcgacgaacgtacatacctcattcttgcgcaacgctataaagaactg
ttctatggcaatagcagctgcggtggtgattcagatgatggcgtaaaaaataatcccgaa
gcgccatatgaattggatggctatcttaccgaaatcaataccggactcatcgataccgat
tacatgaatgccaacttcaataaatggctgaaggcgctcaaggagaatagcccggaattg
gcggagatgtctgcgcagctacaccgttcctttgccgcgctctcgcgggacgaacaacga
ctcgccgaactgttcctgcatgacgtggagcgtggcgacgtggaggttgaagccggcatt
acgctacgtgattacatcacgcgctatgctgcacgcgagaagaatgagcaagtcgacaaa
ctggtcgatcgattgggtgtcaacagatcggtggtcgaggaattccttgccaaacgtata
gacgaggcgaacatcaacgagttcggacgtttcgatgcactgcgttcctcgcttgacgtg
caacgggcaaaagccttctttgagcagcatgatcacaaggcattgccggtgttcaaggtg
cgtatgcgcgccaccaatatgttgaagcgtttcgtactcatgggcggattcgacatcgat
gataccgacaatacggatggacaaagcgagacgaagaacgagcactag

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