Bifidobacterium longum subsp. infantis ATCC 15697 (Tokyo): BLIJ_0269
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Entry
BLIJ_0269 CDS
T02092
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
blon
Bifidobacterium longum subsp. infantis ATCC 15697 (Tokyo)
Pathway
blon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BLIJ_0269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blon03021
]
BLIJ_0269
03019 Messenger RNA biogenesis [BR:
blon03019
]
BLIJ_0269
Transcription machinery [BR:
blon03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BLIJ_0269
Messenger RNA biogenesis [BR:
blon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BLIJ_0269
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
SAP
Spore_III_AA
NACHT
PIP5K
Motif
Other DBs
NCBI-ProteinID:
BAJ67863
UniProt:
A0ACD7UNR7
LinkDB
All DBs
Position
312267..314330
Genome browser
AA seq
687 aa
AA seq
DB search
MANSQNLEDMKLPELKELAKQMGLRGTSTMRKPELRATLQAARNGGEPPAGVTVRAPKAA
KTAKVVKAPQPDAAEASTTDNADAATQSLAPAPAATEPQLDLPLPVADDAKKDETEPRRT
RRKAADDAAFEPRAARRRRDDDQSDFARRKPRKKADEAGDLLATLDLGDAAPTERRRERH
EDVEVPLIRRVRDDEDEQPRRRRRTAENSEETVRDLDDILATLPTQKHEETAEDGEQNDD
HEFVRRNRRDRSDRNDRDNRNDRNDCRNRRMRGRDRDNADDDRRYDDRDNRSDRNDRDSR
REEPQEDLVPVAGIVDVLDSYAFVRTSGYLPGPNDVYVSMGQVKKYGLRKGDAVHGSIRA
PREGDRRNQRQKFVPLQAIDSINGQSVEEALNRPQFSKLTPLYPQERLKQETAPNKLTGR
IMDIVSPIGKGQRGLIVSPPKAGKTITLQNIANSIAANNPEVHLMVVLVDERPEEVTDME
RTVQGEVISSTFDRPASDHTTVAELAIERAKRLVELGQDVVVLLDSMTRLARAYNIAAPA
SGRILSGGVDAQALYPPKKFFGAARNIENGGSLTIISSALVETGSKMDEVIFEEFKGTGN
MELRLSRELADKRLFPAIDINASGTRREELITNPQELPVIYRLRRLLGGMEPEQAYQTLV
PRLKKTATNRDFLAAIVQQQSGAVNGN
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaatagccagaatcttgaggatatgaagctgcctgagctcaaagagctcgctaaa
cagatgggcctgcgcggcacgtcgaccatgcgcaagcccgagctgcgcgccaccctgcag
gcggcgcgcaatggtggagagccgccggccggtgtgaccgtgcgcgcccccaaggccgcc
aaaaccgccaaggtcgtcaaggctccgcagcccgatgccgctgaggccagcaccacagac
aatgctgacgcggccacccagtcgctggctccagctccggctgccacggaaccgcagctc
gatttgccgcttcccgtggccgacgatgccaagaaggacgagaccgaaccgcgacgcacc
cgtcgtaaggccgccgatgatgccgcattcgaaccgcgtgcggcccgtcgtcgtcgcgat
gacgaccagtccgatttcgctcgccgcaagccgcgcaagaaggccgatgaggccggcgat
ctgctggccacgctcgatttgggagatgcagcgcctaccgagcgtcgccgcgagcgccat
gaggacgtggaagttcctctgattcgccgagtccgtgatgatgaggacgagcagcctcgc
cgccgccgtcgcactgcggaaaacagcgaagaaaccgtgcgtgacctcgacgatatcctg
gccacgctgcccacgcagaagcacgaggaaacggccgaagacggcgagcaaaacgacgat
cacgagtttgtgcgtcgtaaccgccgcgaccgtagcgatcgtaacgatcgcgataaccgt
aatgatcgcaacgattgccgtaaccgccgcatgcgtggccgtgatcgcgacaacgccgat
gatgatcgtcgctatgatgatcgcgataatcgtagcgatcgcaatgaccgtgatagccgc
cgcgaagagccgcaggaggatctggtgccggtggccggcatcgtcgacgtgctcgactcc
tacgcttttgtgcgcacttccggctacctgccaggcccgaacgacgtgtacgtttccatg
ggccaggtcaagaagtacggtctgcgcaagggcgatgccgtccatggttcgattcgcgcc
ccgcgcgaaggcgaccgtcgcaaccagcgccagaagttcgtgccgctgcaggccatcgat
tccatcaacggccaaagcgttgaagaagcgctcaaccgtccgcagttctccaagctcacg
ccgctgtacccgcaggagcgtttgaagcaggagaccgccccgaacaagctcaccggccgt
atcatggacatcgtttccccgatcggcaagggccagcgtggtctgattgtctccccgccg
aaggccggtaagaccatcaccctgcagaacatcgccaactccatcgccgccaacaacccc
gaggtccaccttatggtggtgctcgtggacgagcgccccgaagaggtcaccgatatggag
cgcacggtccagggcgaggtcatttcctccaccttcgaccgtccggcctccgatcacacc
acggttgccgaactggccatcgaacgcgccaagcgtcttgtggagctcggccaggacgtg
gtcgtactgctcgattccatgacccgactggctcgcgcttacaacatcgcagcccctgcc
tccggccgcatcctgtccggtggtgtggacgcgcaggccctctacccgccgaagaagttc
ttcggcgccgcccgcaacatcgagaacggcggttccctgaccatcatctcctccgcgctg
gtcgagaccggctccaagatggatgaggtgattttcgaggagttcaagggcaccggcaac
atggagctgcgcctgtcccgcgagctggcggacaaacgactgttcccggccatcgacatc
aacgcttccggcacccgccgcgaggagctcatcaccaatccgcaggaactgccggtcatc
taccgtctgcgtcgtctgctgggaggcatggagcccgagcaggcctaccagacgctggtg
ccgcgcctcaagaagaccgccaccaatcgggacttcctcgccgccatcgtgcagcagcag
agcggagccgtgaacggcaactga
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