Bifidobacterium longum subsp. infantis ATCC 15697 (Tokyo): BLIJ_0789
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Entry
BLIJ_0789 CDS
T02092
Name
(GenBank) putative DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
blon
Bifidobacterium longum subsp. infantis ATCC 15697 (Tokyo)
Pathway
blon03420
Nucleotide excision repair
blon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
blon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BLIJ_0789
03430 Mismatch repair
BLIJ_0789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blon03400
]
BLIJ_0789
Enzymes [BR:
blon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BLIJ_0789
DNA repair and recombination proteins [BR:
blon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BLIJ_0789
MMR (mismatch excision repair)
Other MMR factors
BLIJ_0789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BAJ68381
UniProt:
B7GPZ7
LinkDB
All DBs
Position
895387..896961
Genome browser
AA seq
524 aa
AA seq
DB search
MEQAQGILEGLDERQRTAATTLQGPVRIIAGAGAGKTRAVTRRIAYACATGAWKPERVLA
VTFSVKAAAEMRARLGQLGVGGGTGRSGSGAGTAGVTAATFHSAALHQLNSVWSDICEAP
FPHVIEDQRDVVSRAIIRATARTDADPLTVRDVLAEINWAKISLVAVEDYARTCAIAHRQ
PPAGLDTARFADVYSAYEQEKTSRGEIDFDDILLLVCHIMDDFPEAAAQIRSTIGWLTVD
EYQDVSPLQHRLLTLWLGGGGPDGKSAMNRNVCVVGDPAQTIYSFAGASSWDLLRFADEF
GPLAADVNLNTDYRSTPEVVNLANRVLAAAPNREDYLKLVSARESGPRVTRTAYESDMKE
AQGVAARIARLVANGAKPSDCAILTRINAQQPVFGAALRAARLKYRVRKDSGWQSSALAD
DAASKRALLEAMGLDATGLAANDDPGVTISTIHASKGLEFKHVFLIGCSEGLLPYGSPET
GDALEEERRLMYVGITRAEDSLHLSYARTKDGYGAQHRRPSRFL
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggcgcaggggattcttgaggggctcgatgagcggcagcgtaccgccgcgact
acgttgcaagggccggtgcgcatcatcgccggcgcaggtgccggtaaaacccgcgcggtc
acgcggcggatcgcctatgcctgcgccaccggggcatggaagccggagcgggtgcttgcc
gtcaccttttcggtaaaagcggcggcggaaatgcgcgcacggttgggccagctcggcgta
gggggaggtacaggacgctccggttcgggtgcgggaactgccggagtcacggccgcgacc
ttccactcagcggcattgcatcagctcaacagcgtctggtcagacatatgcgaggctcca
ttcccgcatgtgatcgaagatcagcgtgacgtcgtctcccgcgcgatcatccgcgccacc
gcacgtaccgatgccgatccgctgaccgttcgcgatgtgctcgccgaaatcaattgggcc
aaaatctcgttggtggcggtggaagattatgcacggacctgtgccatcgcccataggcaa
ccgcccgccggactcgacaccgctcggttcgccgacgtctacagcgcctacgagcaggaa
aagacctcgcgtggcgaaatcgattttgacgatattctgctgctcgtatgccatatcatg
gatgattttcccgaagccgccgcccaaattcgttccaccatcggctggctcaccgtcgac
gagtatcaggacgtctcgcccctgcaacacaggctgctgaccctgtggctgggcggggga
ggacctgacggcaagagcgcgatgaaccgcaacgtatgcgtcgtgggcgatccggcccag
accatctactcgtttgccggtgcctccagctgggatctgctgcgtttcgccgatgaattc
gggccgctcgccgccgatgtcaatctcaacaccgactatcgttcgacgccggaagtcgtg
aacctcgccaaccgggtgcttgcggccgcgccgaaccgtgaggattacctgaaactggtt
tccgcccgcgaatccggcccgcgcgttacccgaaccgcttatgagagcgatatgaaagag
gcgcagggcgtggcggcacgcatcgcccggttggtcgccaacggggccaagccgtccgat
tgcgcgatcctcacccgcatcaacgcccaacagccggtattcggtgccgccttgcgcgct
gcaagactgaaataccgcgtccgcaaggattcgggatggcaatcatccgcgctcgccgac
gatgccgcgtccaaacgcgcactattggaggcgatgggtttggacgccaccggacttgcc
gcaaacgacgatcccggcgttacgatttccacgatccacgcatccaagggtctggaattc
aagcacgtgttcctgatcggctgttcggaagggctcttgccgtacggttcgccggaaacg
ggggatgcgctggaagaggaacgccggcttatgtatgtgggcatcacccgagctgaggat
tcgctgcatctgtcgtatgcgcggaccaaggatggttatggagcgcaacacagacgccca
tcacgatttttgtga
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