Bifidobacterium longum subsp. infantis ATCC 15697 (Tokyo): BLIJ_0833
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Entry
BLIJ_0833 CDS
T02092
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
blon
Bifidobacterium longum subsp. infantis ATCC 15697 (Tokyo)
Pathway
blon03030
DNA replication
blon03430
Mismatch repair
blon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
blon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BLIJ_0833
03430 Mismatch repair
BLIJ_0833
03440 Homologous recombination
BLIJ_0833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blon03032
]
BLIJ_0833
03400 DNA repair and recombination proteins [BR:
blon03400
]
BLIJ_0833
Enzymes [BR:
blon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BLIJ_0833
DNA replication proteins [BR:
blon03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BLIJ_0833
DNA repair and recombination proteins [BR:
blon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BLIJ_0833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
OB_MCM10
tRNA_anti_2
DUF655
DUF5487
Motif
Other DBs
NCBI-ProteinID:
BAJ68425
LinkDB
All DBs
Position
954165..957698
Genome browser
AA seq
1177 aa
AA seq
DB search
MQLHNHTHYSLLDGASKIPDLAKRAAELGMPAVGITDHGNMHGAYEMYTNCVANGVKPII
GIEAYVTPETARQDKSRVHWGTEAQRRDDVSGGGLITHLTMWAENDEGLVNLIKASSVAN
LEGRVMRYPRMDKEVLATYSKGVIASSGCPSGIIQTRLRLGQFDEALRAAGEFQDIFGKD
NFFIELMDHGLPIETQVTGDLLTIAKKLNAPLLATNDSHYVHAEDAQAQDAMLCINSGSR
LDDPDRFKFDGTGYYIKTAEEMRELFKDHPDACDNTLVIAERCNVMFDDHEDGAFMPKFP
CPEGWDETSLFLKKVEEGLEKRYDGNPPLDVLKQADYECGVICQMQFCGYFLVVADYIQW
AKDHGIMVGPGRGSAAGAMVAYSMGITELDPLKHGLIFERFLNPERVSLPDIDVDFDPEG
RARVIEYCGEKYGTDKVAQCVIYGTIKTKQALKDSARIMGYEFSVGEKVTKALPPAATGG
KDISLHDIFDPTAKRYAEAREFRELYDSDPDAKRITEEAKGIEGLIRQTGVHACATIMGS
APITDTSPLLERTDGTITTTFEYHTCETLGLVKMDFLGLSNLTIIHDTLKNIVANGKPAI
DYTKIPLDDAETYKLMSRGDTLGVFQLDSDGMRSLLKTLKPDNFNDISALIALYRPGPMS
MDSHTNYAKRKNGLQKITPIHPELEEPLKQVLDETYGLIIYQEQVQSAARILAGYSLGKA
DVLRRAMGKKKPEVLAKEKVPFFAGMKEHGYSEEASQAVWDILVPFSGYAFNKAHSAAYG
LISYWTAYLKTHYPVEFMAALLQGAATNKDKTALYLGEARRMGIQVLSPDVNESVYEYSA
VGDVVRFGLGAIRNVGDKAVADIIAEREGPRGKFVNFMDFIRRVPLTALNRRLVESLIKA
GAFDSIDPNRRALFTVHEAAIDSVVSLKRKQAEGQFDLFSDAEDGGAEAMGDASVTVPDL
EEWDKKTKLNFEREMLGLYVSDHPLSGMQSILASLREMSIAHLVDRARTMGEGQQVTLAG
LVTNVDRRVSKKGNPWAIVTIEDMESSVQCMFFGKVYEAAAAELAVDAIVQIRGQVELRD
ETVSLRATEMQIPTLEAEDERPLVITLPPVALERQRMMQLGQVLANHPGYCEVHLAVLDE
KGNAQVLTFGDRFRVKRDTSLFAEIKILFGPSCLPAA
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
gtgcaactgcataaccacacgcactattcgctgctcgatggtgcgtcgaagatccctgat
ttggccaagcgtgcggccgaacttggcatgcctgcggtcggcatcaccgaccatggcaac
atgcatggcgcctacgagatgtacaccaactgcgtggccaatggcgtcaagcccatcatc
ggcatcgaagcttatgtgaccccggaaaccgcacgtcaagacaaatcccgcgtgcattgg
ggcactgaagcccagcgccgtgacgacgtctccggtggtggtcttatcacccacttgacc
atgtgggctgaaaacgacgaaggcctggtcaacctcatcaaagcttcgtccgtggccaac
ctcgaaggtcgcgtcatgcgttatccgcgtatggataaggaggtgctcgccacctattcc
aaaggcgtgatcgcatcctccggctgcccctcgggcatcatccagacccgtctgcgtctc
ggtcagttcgatgaggccctgcgcgccgctggcgaattccaggacatcttcggcaaagac
aacttcttcatcgaactcatggatcacggtctgcccatcgaaactcaggtgaccggtgac
ctgctgaccatagccaagaaactcaacgcaccactgctggccactaacgattcccactac
gtacacgccgaagatgcccaggcacaggacgccatgctctgcatcaactccggttcccgt
cttgacgatccggaccgattcaaattcgacggcaccggctactacatcaaaaccgccgaa
gagatgcgcgaactgttcaaggaccatccggacgcctgcgacaacaccctcgtcatcgcc
gaacgctgcaacgtgatgttcgacgaccacgaagacggcgcgttcatgccgaaattcccc
tgccccgaaggctgggatgagacctccctgttccttaaaaaagtcgaggaaggtctggag
aagcgttacgacggcaacccgccgctcgacgtattgaagcaggccgactacgaatgtggt
gtgatctgccagatgcagttctgcggatacttcctcgtggtcgccgactacattcagtgg
gccaaggaccacggcattatggtgggtccgggccgtggctcggccgcaggcgccatggtc
gcctattccatgggcattaccgagctcgatccgctcaagcatggcctgattttcgagagg
ttcctgaaccctgagcgagtgagccttcctgatatcgatgtcgacttcgaccctgaaggt
cgtgcgcgagtcatcgaatactgcggcgaaaaatacggcaccgataaggtcgcccagtgc
gtgatctatggcaccatcaaaaccaagcaggccttgaaggactccgcccgcatcatgggc
tacgagttctcggtcggtgaaaaagtcaccaaggcgctgcctcccgcggccaccggcggc
aaggatatcagcctgcatgacatcttcgacccgacagccaaacgctacgccgaggccagg
gaattccgagaactctacgattccgacccggacgccaagcgcatcaccgaagaagccaag
ggtatcgaaggcctgatccgacagaccggtgtacatgcctgcgccaccatcatgggtagc
gcgcccatcaccgacacctcgccgttgctggaacgcaccgatggcaccatcaccaccacc
ttcgaataccacacgtgcgaaacgttggggctggtcaagatggacttccttggcctgtcc
aatctgacgatcatccacgacaccctgaagaacatcgtggccaacggcaaacccgccatc
gactacaccaagattccgctcgatgacgccgaaacctacaaactcatgtcccgaggagac
acgctcggcgtgttccagctcgattccgacggcatgcgttcactgctgaaaaccctgaag
cccgataacttcaacgatatttccgcacttatcgccctgtaccgaccgggcccgatgagt
atggattcgcacaccaactatgccaagcgcaaaaacggcctgcagaagatcacgccaatc
caccctgagcttgaggagcctctgaagcaggtgcttgacgagacctatggcctgatcatc
taccaggagcaggtgcaatccgccgcccgaatcctcgccgggtattcgctgggcaaggca
gacgtgctgcgtcgagccatgggtaagaagaagcccgaagtgctggccaaggagaaggtg
ccgttcttcgccggtatgaaggagcacggatattccgaagaggcatcccaggccgtgtgg
gatattctggtgccgttctccggctacgctttcaacaaggcgcactccgccgcatacggt
ctgatctcctactggaccgcatatctgaagacgcactacccggtcgagttcatggccgcc
ttgttgcaaggtgccgccaccaacaaagacaagaccgcattgtacttgggcgaggcccgc
cgcatgggcatccaggtgctctcgccggacgtcaacgaatcggtgtacgagtactcggca
gtcggcgacgtcgtccgattcggtcttggtgccatccgtaacgtgggtgacaaggccgtg
gccgatatcatcgccgaacgcgaaggcccgcgcggcaagttcgtgaacttcatggacttc
atccgccgtgtgcccttgaccgcgctgaaccggcgattggtcgaatcgttgatcaaggcc
ggtgccttcgactcgattgacccgaaccgtcgcgcgctgttcaccgtgcacgaggccgcc
atcgactcggtggtgagtctgaagcgcaaacaggcggagggccagttcgatttgttctcc
gatgccgaggatgggggagcggaggccatgggcgacgcttccgtgaccgtacccgatctt
gaggaatgggacaagaagaccaagcttaacttcgaacgcgaaatgttgggcctgtatgtg
tctgatcatccgctctccggtatgcagtcgattctcgcgtccttgcgtgaaatgtccatc
gcgcacttggtcgatcgcgccaggacgatgggtgaaggacagcaggtcacgttggccggt
ctggtcaccaatgtggaccggcgcgtatccaagaagggcaacccctgggccatcgtgacc
atcgaagacatggaaagctccgtccaatgcatgttcttcggcaaggtctatgaagcggcc
gccgccgaacttgccgtggacgccatcgtacagattcgtggtcaagtggagttgcgcgac
gaaaccgtttctctgagagccacggaaatgcagattccgaccttggaggccgaggatgaa
cgtccgttggtcatcacgctgccgccggtggcgttggagcgccaacgcatgatgcaactc
ggtcaggtgctcgctaatcatcctggttactgcgaagtacatcttgcggtgctggatgag
aagggtaacgctcaggtgctcacgtttggcgatcgtttccgcgtcaagcgggatacttcg
ttgtttgctgagatcaagattctgtttggccccagctgcttgcctgccgcctga
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integrated database retrieval system
