Bifidobacterium longum subsp. infantis ATCC 15697 (Tokyo): BLIJ_1107
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Entry
BLIJ_1107 CDS
T02092
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
blon
Bifidobacterium longum subsp. infantis ATCC 15697 (Tokyo)
Pathway
blon03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
blon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BLIJ_1107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blon03400
]
BLIJ_1107
DNA repair and recombination proteins [BR:
blon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BLIJ_1107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH_5
UVR
GIY-YIG
HHH_2
HHH
UPF0758_N
DUF1995
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
BAJ68695
LinkDB
All DBs
Position
1267558..1269924
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AA seq
788 aa
AA seq
DB search
MTNDIERHSPDEWRKTAAALMPESVAVGAGETTAKVNANGAPLLGDSRDLFRPKTSDIPT
KPGVYKWRDGEGRVIYVGKAKNLRNRLTNYFQPLYLLHPRTQTMVLTARSLEWTVVATEL
ESLTLEYTWIKEFDPRFNVQFRDDKTYPYLAVSTGERIPRVWVTRSRKRRDTRYFGPYAK
VWELRHSLDRLLRTFPVRTCTTSVFHKAQLTGRPCLFASIGKCSAPCVNRIEADEHRRLC
EQLVGVMTGRLGRPYIAQLTRDMKEASAELEFEKAARLRDQIQMLETVVQQNAVVFDQDV
DADVFGFASDELEASVHAFYVRAGSIRGERNWSVERVEDIDDADLMADLLAQVYSDAAGD
NHPQSAATISTNREAIGSTQTITAADAVARAQATRERNTRQETTGRADLLAPIAPVPREI
IVPVEPARREELEGWLTNLRGGAVTIRVASRGDKKQLMGRANENASQALQRSKMSRISDM
GARTQAMNDVAKALGLAEAPLRIECYDISNTVGGAFQVSSMVVFEDAIAKKSEYRRFAIR
GKDGKGAVGDLSALYETLTRRFKHGNIAGDSGESIDAEQRAASAAGKMTTAVAAETIAAN
GNDNGENGSDISGKGHAVPDGVQNDTRETSPDIVQQNTNRHHFAYKPNLVVVDGGKPQVM
AAAKALEDCGVNDVAVCGLAKRLEEVWVPDDDYPIILKRQSEGMYLLQRVRDESHRFAIT
YHRQQRRKGALRSALDEIPGIGKSYQKRLLNHFGSVKAMREASVEDFEKVKGIGHAKAEA
LYNALHEQ
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacgatattgagcggcatagtccggatgagtggcggaagactgcggcggcgtta
atgccggaaagcgtagctgtgggtgccggggaaacgacggcgaaggtgaatgcgaatggg
gcacctttgctgggggattctcgcgacctgttccgacccaagacctcggatattcccacc
aaacccggtgtgtacaaatggcgcgacggggaagggcgcgtcatttatgtgggcaaggcg
aagaacctgcgcaacaggctcaccaattatttccagccgctgtatctgctgcatccgcgc
acgcagaccatggtgctgaccgcacgcagtctggagtggacggtcgtcgccaccgaactg
gaatcactgacgttggaatacacgtggatcaaggaattcgacccacggttcaacgtgcag
ttccgcgacgacaagacctatccgtatctcgcggtcagcacgggggagcgaattccgcgc
gtgtgggtcactcggtcgcgcaaacgtcgggatacccggtatttcggcccctatgccaaa
gtatgggaattacggcacagccttgaccggctgttgcgcacgttcccggtccgcacctgc
accaccagcgtattccacaaggcgcaactgaccggacggccatgcctgttcgcctccatc
ggcaaatgctccgcaccctgcgtgaaccgtatcgaagcggacgaacaccggcggctgtgc
gaacagctggtcggcgtgatgaccggacgactcggacggccctacatcgcccagttgacc
cgcgacatgaaagaggccagcgccgaactcgaattcgagaaagccgcccgactgcgcgac
cagatccaaatgctggaaaccgtggtgcaacagaacgccgtcgtcttcgaccaggatgtg
gacgcggacgtgttcggcttcgccagcgacgagctcgaagcctcagtgcacgccttttat
gtgcgcgccggctcgattcgcggcgaacgcaattggagcgtcgaacgagttgaggacatc
gatgacgccgacttgatggccgaccttctggcgcaggtgtattcggacgccgccggggac
aatcacccccagtcggccgcgaccatctccaccaatcgcgaggccatcggctccacgcaa
accatcacggccgcggacgctgtggcacgcgcccaggccacccgagaacgcaacacccgt
caggagaccaccggacgcgcggacctgctggcacccatcgcaccggtaccgcgcgaaatc
atcgtgcccgtcgaaccggcccgccgtgaggaactcgaaggctggctgaccaatctgcgc
gggggagcggtgaccatccgtgtggcctcgcgaggcgacaagaagcagctcatgggccgc
gccaatgagaacgccagccaagcactgcagcgcagcaagatgagccgcatctccgacatg
ggcgcacgcacccaggccatgaacgatgtggccaaggcattgggactcgcggaagccccg
ctgcgcatcgaatgctacgacatttcgaacactgtgggcggtgccttccaggtgtcctcc
atggtggtgttcgaagacgcgatcgccaagaaatccgaataccgacgcttcgccatccga
ggcaaggacggcaaaggcgcggtgggtgatctgtccgcactttacgagacgctcacccgc
cgcttcaagcacggcaacatcgccggcgactccggcgaaagcatcgacgcggaacagcgc
gcggcctcggccgccggcaagatgaccactgccgtggcggcggagacaatcgctgcgaac
ggtaacgacaatggtgagaacggttccgacatcagtggcaaggggcacgcggtgccggac
ggagtgcagaacgatacacgggaaacttcgcccgacatcgtccagcagaacacaaaccgg
catcactttgcctacaagccgaacctggtggtggtcgacggcggcaagccgcaggtcatg
gccgccgccaaggcgctcgaggactgtggcgtgaacgacgtggccgtctgcggactggcc
aaacgcttggaagaggtgtgggtgccggacgacgactatccgatcatcctcaaacgccag
tccgaaggcatgtatctgctgcagcgtgtacgcgacgaatcccaccgcttcgccatcacc
taccaccgccaacagcggcgcaaaggcgccctgcgcagcgcgctcgacgagattccaggc
atcggcaaaagctaccagaagcggctgctcaaccacttcggctcggtcaaagccatgcgc
gaagccagtgtcgaggacttcgagaaggtcaaaggcatcggccacgccaaagccgaagcg
ctgtacaacgcgctgcacgagcagtga
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