Bifidobacterium longum subsp. infantis ATCC 15697 (Tokyo): BLIJ_1772
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Entry
BLIJ_1772 CDS
T02092
Name
(GenBank) putative exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
blon
Bifidobacterium longum subsp. infantis ATCC 15697 (Tokyo)
Brite
KEGG Orthology (KO) [BR:
blon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
blon03016
]
BLIJ_1772
Enzymes [BR:
blon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BLIJ_1772
Transfer RNA biogenesis [BR:
blon03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BLIJ_1772
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
BAJ69353
UniProt:
B7GSV8
LinkDB
All DBs
Position
complement(1874114..1875415)
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AA seq
433 aa
AA seq
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MSDVRDTEPRLLKEPRGGVPDVTSTLDGYHRACDALAEATGSLAADAERASGFRYGHEDW
LIQFKREGAGIALLDPVALTRAGADWNEFNDAVGDATWILHDSLMDLPGFAEIGLKPKAL
FDTEIAARLLGLHRFGLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIE
LETLMRRDLKAAGKDEWAAEEFSHALVAGLAPRKLHPIPWLRISRITQLSRDPRGLAIAK
SLWEERDRLARQYDIAPSLLLTDSSIIEAATNKPHNAAQFRALRSLNERVRIHTGTEQDK
MFERYAPIQRTVKPKVWKQAIDRAMALKPTQWPTMPAPEQGENGVVNAPRSMRLWQQRHP
ERYDRLQRVRRVINRIAEDTRTPAEMIIKPQALRNLCWVEDPVEVDVEAFLIEQGARNWQ
VKLIAPSVSGVIM
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgacgtccgtgacaccgaaccccgactgctgaaagagcctcgcgggggagtgccc
gatgtcacttcgacgctggatggctatcatcgtgcctgcgatgcgctggccgaggcgacg
ggctcgctggccgccgacgccgaacgtgcgtctggattccgctatggacatgaggattgg
ctgattcagttcaaacgtgaaggcgcgggcatcgccttgcttgatcccgtcgccctgaca
cgggccggagctgactggaatgaattcaatgacgccgtgggcgacgctacgtggattctg
catgattctctgatggacttgcctggattcgccgaaatcggactcaaacccaaggccttg
ttcgacacggaaatagcggcgcgattgctcggcctgcaccgcttcggtctggccgccgtc
accgaacattacctcggcatcacgctggccaaagagcattccgccgccgattggtcctac
cgtccgctgccgcgcgactggcgcaactatgctgcgctcgacgtggaggtgcttatcgaa
ctcgaaaccttgatgcgtcgtgacctgaaagccgcaggcaaggatgagtgggccgctgaa
gagttttctcacgctttggttgcgggccttgccccgcgcaaactgcatccgattccttgg
ctgcgtatctcgcgcatcacccagctgagtcgtgatccaaggggcttggccatcgccaaa
tccctatgggaggagcgcgaccggctcgcccggcaatacgatattgcccccagcctgtta
ttgaccgattcgtcaatcatcgaggccgcgaccaacaagccgcacaatgccgcccaattc
cgcgcgctccgatccctgaacgagcgtgtgcgcatccataccggtaccgagcaggacaaa
atgttcgagcggtacgcgccgattcagcgtacagtcaaaccgaaggtctggaagcaggcc
atcgaccgagccatggccctgaagcccacccaatggcctaccatgcctgcccccgaacag
ggcgaaaacggtgtggtgaacgcgccccgatccatgcgactgtggcaacagcgccatccg
gagcgttatgaccgtctgcaacgggtacggcgtgtgatcaaccgcatcgccgaagacacc
cgcacgccggccgagatgatcatcaagccacaggccctacgcaacctgtgctgggtggaa
gacccggtggaagtggacgtcgaggcgttcctgatcgagcagggcgcaaggaactggcag
gtgaaactcattgcaccgtccgtaagtggcgttatcatgtag
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