Salinivirga cyanobacteriivorans: L21SP5_00019
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Entry
L21SP5_00019 CDS
T04172
Symbol
clpC
Name
(GenBank) Negative regulator of genetic competence ClpC/MecB
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
blq
Salinivirga cyanobacteriivorans
Brite
KEGG Orthology (KO) [BR:
blq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
blq03110
]
L21SP5_00019 (clpC)
Chaperones and folding catalysts [BR:
blq03110
]
Heat shock proteins
HSP100
L21SP5_00019 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
Sigma54_activat
AAA_22
nSTAND3
AAA_14
TniB
IstB_IS21
ATPase_2
RuvB_N
AAA_3
ResIII
AAA_7
bpMoxR
RsgA_GTPase
Torsin
DUF815
AAA_18
AAA_19
AAA_29
UVR
DUF6003
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ALO13701
UniProt:
A0A0S2HUN4
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All DBs
Position
20658..23198
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AA seq
846 aa
AA seq
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MNAQFSERLHEVLSYSREEAIRLGNESISVEHLFLGILREGEGPAVDVLISMGIKLFELR
QIIEEQIRQDKVTDIAEKNNLPLLRPAERVLKLIYLEARSLESEEVDTQHLMMAILKEEN
SLTAMTLREMQVDYDRFKENYLKYSPQARSDSGYGDEEMDEPGDFQSSTSKSDSDTPVLD
NFGVDLTKAAEEKRLDPIVGREIEIERLAQILSRRKKNNPVLIGEPGVGKSAIVEGMAAR
IVKRQVSRVLFDKRIMTLDLASIVAGTKYRGQFEERIKAILNELSKNDNIILFIDEIHTI
VGAGGATGSLDAANMLKPALARGEIQCIGATTLDEYRQHIEKDGALERRFQKVMVEATSQ
EETMEILHRIKDRYEEHHNVNYTEEALDACIKLSMRYISDRYLPDKAIDALDESGSRVHI
SNINVPERILELEKEIEKIHDEKIQKVHEQNFEQAAALRDTERKKNDELEKEKENWEQEL
VKHRETVTEENVAEVIAMMTGVPVQRIAQTEGNRLLKMGEEIRENVIGQEQAIDKIVKAI
QRNRAGLKDPNKPIGTFIFLGPTGVGKTQLAKVLAEYLFDSQDALLRVDMSEYMEKFAVS
RLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFHILLQVLDEGRLTDSFG
RRVDFRNTIIIMTSNIGSRELREFGQGVGFATSATVKSVDDRAKGIIQKALKNAFAPEFI
NRLDDVVMFNSLDKAAINKIIDIELKGLYIRTEELGYKLELSAPAKEFIADKGFDTQYGA
RPLKRAIQKYLEDEMAELILKSDISAGDTIKAVFSKKEEKIEFKIKKASNEADPSGDNEE
NKKENN
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcacaattttctgaaagattacacgaagttttatcatacagccgggaagaggcc
atacgccttggaaatgaatcgattagcgtagagcatctcttcctcggaattttgcgtgaa
ggcgaagggccggccgttgacgtgcttatttcaatgggtataaaactcttcgaactgcga
caaatcattgaagaacaaatcaggcaagacaaagtgaccgacattgctgaaaaaaataat
ttgccactgctcaggcctgcagaacgggtactgaaacttatttacctcgaggcccggtca
cttgagagtgaagaggtcgatacccagcacctgatgatggctattttaaaagaagaaaac
tccttaaccgccatgacactgagagaaatgcaggtagattatgatcgttttaaagagaat
tatttaaaatacagcccccaggccagaagcgattccggctatggagacgaagagatggac
gaacccggtgattttcaatcatcgacctcaaaatcagactctgacacgccggtactcgat
aatttcggtgtagaccttaccaaggctgcagaagagaaacgtctggatccgattgtaggg
cgtgaaattgaaattgaacgacttgcacaaatcctgagccggcgcaaaaagaataatccg
gtactgattggtgaaccaggagttggtaaatcagctattgttgagggcatggctgcccgt
attgtaaaacgacaggtttcccgcgttttatttgacaaaagaattatgacacttgatctg
gcttctattgtagccggaacaaaatatcgtggccagtttgaagaacgcataaaggccatt
cttaatgagctgtcgaagaatgacaatattattcttttcattgacgaaattcataccatt
gtaggcgcaggaggggcaacgggatcgctcgatgcagcgaatatgcttaagcctgcacta
gcacgtggcgaaatacaatgtataggcgccaccaccctggatgaatatcgccagcatatt
gaaaaagatggtgcactggagcgtcgcttccagaaagttatggtcgaagcaacttcccag
gaggaaaccatggagattctgcaccgcataaaggatcgttatgaagagcatcataatgtg
aattatacagaggaagcacttgatgcatgtataaagttatctatgcgttatataagcgac
cgctacttgccggataaagccattgatgcactggatgaaagtggatcgcgcgtgcatatt
tccaatattaatgtgccggaacggattttggaactggaaaaagagattgaaaaaatccac
gacgaaaagatccaaaaggtacatgaacaaaattttgaacaagctgctgctcttagagat
acagagcgaaaaaagaacgatgagctcgaaaaagaaaaagaaaactgggaacaggagctt
gtcaaacatcgtgaaaccgtgacggaagaaaatgtggcagaagtaattgccatgatgaca
ggtgtacctgttcagcgtattgctcaaaccgaaggtaaccgcttgttgaaaatgggcgaa
gagatacgtgaaaacgttattggacaggagcaggccattgataaaattgtgaaagcaatt
caaaggaatcgcgcagggcttaaagatcctaataaaccgatcggtacatttatttttctt
ggacccaccggtgtgggtaaaacacaattggccaaggtgctggccgagtacctttttgac
tcacaagatgccctcttgcgtgtcgatatgagtgaatatatggagaaatttgcagtttcg
cgacttgttggagcacctcccggatatgtaggttatgaagaaggcgggcaacttaccgaa
aaagtgcgccgcaagccctattcagttgttttgctcgatgaaatcgaaaaagcacacccc
gatgttttccatattttactacaggtgcttgatgaagggcgtttgacagatagttttgga
cgcagagtagattttaggaacaccatcatcattatgacttcgaacattggttcgcgagaa
ttgagagaattcggacagggtgttggttttgccacgtctgctaccgttaaaagtgtcgat
gatcgtgccaagggtatcattcaaaaggctttaaaaaatgcatttgcgcctgagtttatt
aaccgcctcgacgatgtggtgatgttcaattctttggataaagccgctattaacaaaata
attgatattgagcttaaaggattgtatatacgaaccgaagaacttggctataaactagaa
ctttcggcaccagcaaaagagttcattgccgacaaaggatttgatacgcaatatggtgct
cgtcctctaaaaagagcgatacaaaaatacttggaggatgaaatggctgaacttatattg
aaatcagacattagtgctggtgataccataaaggcagttttcagtaaaaaagaagaaaaa
attgaatttaaaataaagaaagcttccaatgaagcggacccctcaggagacaatgaggaa
aacaaaaaagaaaataattaa
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