Salinivirga cyanobacteriivorans: L21SP5_00531
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Entry
L21SP5_00531 CDS
T04172
Symbol
sbcD
Name
(GenBank) Nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
blq
Salinivirga cyanobacteriivorans
Brite
KEGG Orthology (KO) [BR:
blq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blq03400
]
L21SP5_00531 (sbcD)
DNA repair and recombination proteins [BR:
blq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L21SP5_00531 (sbcD)
Archaeal homologous recombinant proteins
L21SP5_00531 (sbcD)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
DUF2019
Motif
Other DBs
NCBI-ProteinID:
ALO14207
UniProt:
A0A0S2HVY0
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All DBs
Position
complement(632126..633343)
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AA seq
405 aa
AA seq
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MKILHTSDWHLGKRLYNRDRLPEQRLILEEIHEIAEQHQVDAIIVAGDLFDVANPSNEAT
ELFYKGLKMLSKEGQRPVIAIAGNHDSPQRIEAPDPLARECGIVFLGYPNSRAPEFGLES
GFKVLRTDDGFLELKLPKQSVPLRIIATPYASEIRMKQHLGFEEDQGLRDALEAQWQNLA
TQYCDDKGVNMLMAHLFVWNRDSEPPEEPEGEKPVRVGNAALVYADLFPEKLQYVALGHL
HRSQQIKGAKMPVQYSGSPLAYSFSEAGQQKFVHIINVEPGKPAAIEKIELRKGLPLKRR
TFENVDEAVLWLQQNQKAFTEITMRTKDFLKADENKRLRDASENLINIIPEPQNRDGNQN
EAAQIDMSQSVNELFRKYFYHTYAQEPNDELMDLFNEILNKKNDQ
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaatacttcatacatccgactggcatctgggcaagcggctttataaccgcgatcgg
ttgccggaacagcgtttgattcttgaggaaattcacgagatagccgagcaacatcaggtc
gatgcgattattgtggccggcgatttatttgatgtggcaaacccatcgaatgaggctaca
gagttgttttacaaagggctgaaaatgctcagtaaagaggggcagcgtccggtaattgcc
attgcaggaaaccacgattcgccgcagcgtattgaagcgcccgacccgttggcgcgggag
tgtggtattgtgtttttggggtatcccaacagccgtgcgccggaatttggcctggaaagt
ggttttaaagtactgcgcaccgatgatggtttcctggaactaaaattgccaaagcagtct
gtgccactgcgtattattgctacaccctacgccagcgaaattcgtatgaaacagcatctt
ggattcgaagaagatcaggggttgcgcgatgcgttggaagctcagtggcaaaatttggct
actcagtattgcgatgataaaggtgtaaatatgcttatggcccatctttttgtgtggaac
cgggattctgagccaccggaagagcctgagggcgagaagcctgtaagggtagggaatgct
gctttggtatatgccgatttattccctgaaaagcttcaatatgtagcgcttggccatttg
catcgttcgcagcaaataaaaggagcaaaaatgccggtacagtatagtggcagtccgctt
gcatacagtttcagtgaagcggggcagcaaaagtttgtacacatcataaacgtggagccg
ggtaagcctgctgccatagagaaaattgaacttagaaaaggtttgcctttgaagcgcaga
acctttgaaaatgttgatgaggcagtgttgtggctgcaacaaaaccagaaggcttttacg
gaaattactatgcgaaccaaagattttcttaaagctgatgagaataaacgcctccgcgat
gccagcgaaaacctgatcaatataattcctgaaccgcaaaaccgcgatggaaatcaaaac
gaggctgctcaaattgatatgagtcagtcggtaaatgaactttttcgaaagtatttttac
catacctatgcgcaggagcccaatgacgaattgatggacctgttcaatgagatactcaac
aaaaagaatgaccaatga
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