Salinivirga cyanobacteriivorans: L21SP5_00685
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Entry
L21SP5_00685 CDS
T04172
Symbol
rluD
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
blq
Salinivirga cyanobacteriivorans
Brite
KEGG Orthology (KO) [BR:
blq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
blq03009
]
L21SP5_00685 (rluD)
Enzymes [BR:
blq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
L21SP5_00685 (rluD)
Ribosome biogenesis [BR:
blq03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
L21SP5_00685 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Ub-Mut7C
TruB_N
Motif
Other DBs
NCBI-ProteinID:
ALO14357
UniProt:
A0A0S2HWM4
LinkDB
All DBs
Position
complement(826632..827654)
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AA seq
340 aa
AA seq
DB search
MENKEQEMYEHYQFHADPGQKPLRIDRFLVVRIENASRNKIQEAAQAGFILVNGTPVKPN
YKVKPGDEVRVMMSQPPREIEIIPEDIPLDIVHEDESLIVVNKPAGLVVHPGYGNYTGTL
VNALAYHFRDLPMFKDNTDPRPGLIHRIDKNTSGLLVIAKTETAKVKLAAQFADHTSQRT
YQAVIWGSPKTDEGTITGHIGRSLKNRKVMTVFPEGEYGKHAVTHYKVLQRYDYVSLIEC
KLETGRTHQIRAHMKYIGHPIFNDNEYGGDRILKGTTFTKYKQFVRNCFEVCPRQALHAK
TLGFKHPESGEMMSFNSDLPQDMSQLLERWTNYLQNRINK
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaggagcaggagatgtatgaacactatcagtttcatgccgatccggggcaa
aaaccattgcgaatagaccggtttttggttgtaagaatagaaaacgcaagtcgtaataaa
atacaggaggctgcccaggcaggttttattttagtaaatgggacacccgtaaagccaaat
tataaggtgaaacccggcgatgaggtacgggttatgatgagtcaacccccacgcgaaatt
gagattattcctgaagatattccgcttgatattgtgcatgaagatgagtcgctgatcgtg
gtaaataaacctgccggacttgttgtccatcccggttatggcaactataccggtacgctg
gtaaatgccctcgcatatcattttcgcgatttgcccatgtttaaagataataccgatccc
agaccgggactaatacaccggatcgataagaatacttccggattgttggtgattgctaaa
acagagactgcaaaagtaaaactggcggctcagtttgcagatcatacgtcacaacgtacc
taccaggctgtaatttggggaagcccaaaaactgatgagggtacaattacgggacatata
ggccggtcacttaaaaaccggaaagtaatgacggttttccctgaaggtgagtatggtaag
catgccgttacgcattataaagtgcttcagcgctacgattatgtttcacttatagaatgc
aagcttgaaaccggcagaacacaccagattcgtgcgcacatgaaatacatcggtcatcca
atattcaacgacaatgaatatggcggcgatcgcatccttaaaggcacaacatttacaaaa
tacaaacagtttgttcgcaattgttttgaggtttgtccacgccaggcacttcacgctaaa
acactgggctttaagcatcctgaaagcggagaaatgatgagctttaattctgatctgcca
caagacatgtcgcagttacttgaaaggtggacaaattaccttcaaaacaggataaacaaa
taa
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