Salinivirga cyanobacteriivorans: L21SP5_01546
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Entry
L21SP5_01546 CDS
T04172
Symbol
rpfC_1
Name
(GenBank) Sensory/regulatory protein RpfC
Organism
blq
Salinivirga cyanobacteriivorans
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_9
Response_reg
HATPase_c
PAS
PAS_3
HisKA
PAS_4
PAS_8
DUF6514
Motif
Other DBs
NCBI-ProteinID:
ALO15193
UniProt:
A0A0S2HYI6
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All DBs
Position
1844002..1847121
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AA seq
1039 aa
AA seq
DB search
MGVNKLTDRNYEYLFTKLDKGIIYQDRTKRIIDLNPKAQQILGIKKEELPVTFPDPDRHV
LINKTGDYPLPYTTVLDTGEATENQFFLYRDIKHDREIPICIQAIPAKKAEESEPEIITL
IIDYTDPSQVSSNSYKIEQWESIQDLAKIGVWEYNPFTNEFSGSEQAIKIYGIKTEPDSE
QTTYKFPLERVQQNIPDREKVNTALKQLIEKSQANDLEQEAIEYEIYREDNNKKIHVQSI
AMPVKDKKGNLIKIRGTIQDITRTKEMEQAIRENELKFRTIFEAAPIGILHYNPEGVITA
CNEKFVDIIGSSQEVLCGLNMYKLPNKKLVKTIDESLKKGSAKYEDWYTSITGKKTTYVR
ILFKGITDYNDQIIAGMGLVEDITDRWKAEQKLKENTQKLKTAQKIGRIGSWQFDLVSNK
VEASKQAYEIYGLKPGQKLTIERTQEIPLPQYRTKLNKALEELLAGKSNYELEFKIKRPI
DGKIAHIYSIAEFNKEKNLVIGTIQDITELKKTQETLNKREKEYRLLVENQNDLIVKVNA
AGEFEFVSDSYCKLFDKSREQLLGSSFMPLVHEDDHASTNQAMKNLYKPPYKCVLEHRAM
TKYGWRWLEWKDNAITDKDGNVTSIVGTGRDITERKLAETKVAEKNRELSETLHQIQEIN
IELEVAKEKAEQSDRLKTVFLGNLSHEIRTPMNGILGFANLLKSENLTASKQKKYLNVIQ
KSGRRMLALIDDLIDISRIEAGQMEIKDHKINLNELMDDIYVFFKPDAERKKLYFTHKKD
LDNTEAIIKTDGEKLEQVITNLLKNALKFTREGQINFGYERVKNVIKFWVKDTGPGIPSS
HLKTIFDRFRQVEDTPFREEEGSGLGLAISKAFVEAMGGEIWVDSQVNEGATFYFTLPYI
PTEQTQRTAQNEDNIDIDQKVRILIAEDDDTSKMYLQELLETDKAELIFAKNGTEVIDKF
QHETIDMILMDIKMPVMNGLDATRHIREMDPHIPIIAQTAYASGSSRQEALRAGCTDFIS
KPIESNKLKRMIRQYIKKR
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtaaacaaacttaccgaccgcaattacgaatacctatttaccaaacttgacaaa
ggtattatttatcaggaccgtactaaaaggattattgatttaaaccctaaagcccagcaa
atactgggaataaaaaaggaagagctccctgttactttccctgatccggatagacatgtt
ttaataaacaagacaggggattacccattaccctatacaacagtgctcgacacaggagaa
gcaacggagaatcagttctttttgtacagagatataaagcatgacagagaaataccgata
tgcattcaggccataccagctaaaaaggcagaagaaagcgaacccgaaattattaccctc
attatcgattatacagatccatctcaggttagttcaaacagttataaaatagagcaatgg
gaaagcattcaagaccttgctaaaataggggtttgggaatataaccctttcactaacgaa
ttttcgggaagtgagcaggcaataaaaatatacggaattaaaacagaaccagacagtgag
caaacaacctataagtttccacttgaaagagtacaacaaaacattccggatcgcgagaaa
gtaaatacggctttaaaacaacttatagaaaaaagtcaggctaatgatctggagcaggag
gccattgaatacgaaatttacagggaagacaacaacaaaaagattcatgtacaatcaatt
gctatgcctgtcaaggataaaaaaggcaacctgataaagataaggggcactatacaggat
atcacccgaacgaaagagatggagcaggccattagggaaaatgaactaaagtttcgcact
atattcgaagccgcaccaattggaatattacattacaacccggaaggtgtaatcactgcc
tgcaatgaaaaattcgtagatattatcggttcgtcgcaggaagtactttgtggtttaaat
atgtataaactccccaataaaaaactggtaaaaactatagatgaatctctaaaaaaaggt
tctgcaaaatatgaagattggtatacatctatcaccggtaaaaaaacgacatatgtacga
atactttttaaaggcataactgactataatgaccagataattgccggaatgggtcttgtg
gaggacataacagatcgctggaaagcagagcaaaagctaaaagaaaacacgcaaaagctt
aaaactgcacaaaaaattggtcgaataggaagttggcagttcgatctggtttccaataaa
gttgaggcttctaaacaggcatatgaaatttatggtttaaaacccggacaaaagctcaca
attgaaagaacacaagaaatacccctgcctcaatacagaacaaaactcaacaaagctctt
gaagaactattagcaggcaaaagcaattatgagctggaattcaagattaaaaggcctatt
gatggtaaaatagcacatatttactcaatagccgaattcaacaaagaaaaaaatcttgtg
attggtacaattcaggatatcacagagcttaaaaaaacccaggaaaccctaaacaaaaga
gagaaagaataccgcctgcttgttgaaaaccaaaacgaccttattgttaaggtgaatgct
gcaggtgaatttgagtttgtaagtgactcatattgcaaactattcgataaaagcagagaa
cagctcctgggcagcagctttatgccacttgtgcatgaggatgaccatgcttcgacaaac
caggccatgaaaaacttgtacaaaccaccttataaatgtgtgcttgaacatagagctatg
accaaatatggttggcgatggctggagtggaaagacaatgccattacagacaaagacgga
aatgttacatctattgtgggtacgggcagagatattaccgaacgcaaactagccgaaaca
aaggtggcagaaaagaaccgcgaactatctgaaaccctgcatcaaattcaggagattaat
atcgagctcgaagtagccaaagagaaagccgaacaaagcgaccgattaaaaactgtattt
ctggggaacctcagccacgaaatcagaacaccaatgaatggtattttgggatttgccaat
ttgcttaagtccgaaaaccttacagcatcgaagcagaaaaaatatcttaatgtaatacaa
aaaagtggtcgcagaatgctggcacttattgatgatcttattgacatttcacgtatagag
gccgggcaaatggaaattaaagaccacaaaatcaatctgaatgaattaatggatgacata
tatgtttttttcaagcccgatgcagaaagaaaaaaactgtatttcactcataaaaaagac
ctcgataatactgaggcaattataaaaaccgatggagaaaaacttgaacaagtcattacc
aacctgcttaaaaatgcactaaaatttaccagagaaggacaaatcaatttcgggtatgaa
cgtgtaaagaatgtcataaaattttgggtaaaggacacaggaccgggaataccctcatcg
catttaaaaacaatttttgatcgattcaggcaggttgaagacacgcccttcagagaagag
gaaggaagcggtctcggtttagcaatatcaaaagctttcgtagaagctatgggaggagaa
atatgggtcgattctcaagtaaacgaaggggcaaccttttactttactttaccttatatc
ccaacagaacagacacagcgaactgcacagaatgaagacaatatcgatattgatcaaaaa
gttagaatcttaattgctgaagatgacgatacaagtaaaatgtatctgcaggaactcctg
gaaacagacaaagctgaacttatttttgcaaaaaatggcactgaagtgatagacaagttt
caacatgaaacgatcgacatgatcttaatggacataaaaatgcctgtaatgaatggcctt
gatgcaacacgccacataagagaaatggatccgcacataccaataattgcacaaacggcc
tatgcttcgggaagctcaagacaggaagcgctcagagccggctgcaccgacttcatctcc
aaacccatagagagcaacaaacttaaaagaatgataagacagtacattaaaaaacgctaa
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