Salinivirga cyanobacteriivorans: L21SP5_01994
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Entry
L21SP5_01994 CDS
T04172
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
blq
Salinivirga cyanobacteriivorans
Pathway
blq03030
DNA replication
blq03410
Base excision repair
blq03420
Nucleotide excision repair
blq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
blq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L21SP5_01994 (polA)
03410 Base excision repair
L21SP5_01994 (polA)
03420 Nucleotide excision repair
L21SP5_01994 (polA)
03440 Homologous recombination
L21SP5_01994 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blq03032
]
L21SP5_01994 (polA)
03400 DNA repair and recombination proteins [BR:
blq03400
]
L21SP5_01994 (polA)
Enzymes [BR:
blq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L21SP5_01994 (polA)
DNA replication proteins [BR:
blq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
L21SP5_01994 (polA)
DNA repair and recombination proteins [BR:
blq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
L21SP5_01994 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L21SP5_01994 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
DUF5066
Motif
Other DBs
NCBI-ProteinID:
ALO15633
UniProt:
A0A0S2I022
LinkDB
All DBs
Position
complement(2404306..2407062)
Genome browser
AA seq
918 aa
AA seq
DB search
MAKPKLFLLDAYALIYRSYFAFIKNPRVNSKGMNTSAAFGFMNVLTELLNKENPDHVAVV
FDVSAPTFRHEMYKEYKANREEMPEELRSNIPYIRELIKAMNIPIIEQKGYEADDVIGTL
AKKLEPNGVEVFMMTPDKDYGQLVSDGIKMYKPKRFGQGIDILGINEINEKYGLERPEQL
IDVMALWGDSSDNIPGAPGIGEKTAKKLIGQYGSVEELYAHIDELKGKQKEKLIENKDQV
MLSKKLVTINTEVPIEQDYSDLERKEINEEALEKIFNELEFRNLKKRLMPDRAAQNDTQG
SLFDMSETKVETDDFENIQTVETDYKLIISKKETEEFAELLSQQTAFCFDTETTSAEPLK
ANLVGMSFSWKKGSAYYVSIKGNELKENEIVNLFKPILEDDSKNIIAQNAKYDMLVMRQF
DISLGNNLFDTMIAHYLIQPELPHNIDSIAERYLNYKKVTTESLIGKKGKGQMSMGQLNP
EKVKDYACEDADITWQLKPLLEKQLKDFKLDRLFNEVEMPLIHVLADMEYYGVTIDSNAL
KNIAAQLRNELIALEQKIHEYAGMEFNIASPKQLGEVLFEKLKITDKPKRTKTKQYATGE
DVLEKLADKHEIVPAILEFRGLSKLLNTYVEALPKLVNDKTGRIHTSYNQAVTSTGRLSS
TNPNLQNIPIRDEKGKIIRKAFIPRDDEHVLLAADYSQIELRIMAHLSQDEAMLEAFKND
EDIHLSTAAKLFKLKPEDVTREQRGQAKGVNFGIIYGISAFGLSQNTGMSNKDAKQLIDN
YFETYPNVKAFMDKSIATAREKGYAETLMGRKRFLPDINSNNRTVRSAAERNAINAPIQG
SSADMIKVAMVRINRALKEKQLKSRMIMQVHDEVIVDTHKNEVDEVKSIVLEAMENAISL
KVKMKVDLNTGNDWLEAH
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaccaaaacttttcttactcgatgcttatgctttgatttacagatcatatttt
gcatttataaaaaacccaagagtgaacagtaaaggaatgaacacttctgctgcttttgga
tttatgaatgtgctcacagaactacttaataaagaaaaccccgaccatgtggctgtggtt
tttgatgtgagtgcgcctaccttcaggcacgaaatgtataaggagtataaagccaaccgg
gaagagatgcccgaggaattacgcagtaatataccctacatccgcgaactaattaaggcg
atgaacatccctattattgagcaaaaaggatatgaagccgacgatgtaattggaaccctg
gccaaaaagcttgagccaaatggcgtagaggtttttatgatgacgcccgacaaggactat
ggccagttggttagtgatggcataaaaatgtataaaccgaaacgctttggacagggcatc
gatatactgggcataaatgaaattaatgaaaaatatggtttagagcgaccggaacaactt
atcgatgttatggcactatggggcgactcttcagataatattcccggcgcaccgggaatt
ggggaaaaaacagccaaaaagcttatcggacagtacggttctgttgaagagttgtatgca
catattgatgaactcaaaggcaaacaaaaagagaagctcatagaaaataaagatcaggtc
atgctttctaaaaagcttgttacaattaataccgaagttcctattgaacaggattatagt
gacctggagcgtaaagagatcaatgaagaggcgctggaaaaaattttcaatgaactggaa
tttagaaatctcaagaaacgtttaatgccagatcgtgccgcgcaaaacgatactcagggc
tcgcttttcgatatgtctgaaaccaaagtggagaccgatgattttgaaaatattcagacc
gttgaaaccgactataaactgattatctctaaaaaggagaccgaagagtttgccgaactg
cttagccaacaaactgctttttgcttcgatacagaaacaacctcagccgaaccgttgaaa
gcaaatcttgttggtatgtcgttttcatggaaaaaaggcagtgcttactatgttagcata
aaaggtaatgagcttaaagaaaatgaaatagtcaatctgtttaaacctatacttgaagat
gattcaaaaaatataattgcccaaaatgccaaatatgatatgttggttatgcggcagttt
gatatttccctgggaaacaatttgttcgacaccatgattgcccattatctcatacaacct
gaattaccacataatattgattcaatcgcagaaaggtatcttaactataaaaaggttacc
accgaatcattaatcggcaaaaaaggtaagggacaaatgagtatggggcagcttaatcct
gaaaaggtaaaggactatgcctgtgaagatgctgatattacctggcaacttaaaccttta
cttgaaaagcaactcaaagactttaaactcgacagactttttaatgaggttgaaatgcct
ctgattcatgtgctggccgacatggaatattatggcgttacaatagacagtaatgctttg
aaaaatattgcagcgcaattgcgtaacgaactgatagcgcttgaacaaaaaatacatgaa
tatgccggcatggagtttaatattgcctcacccaaacaacttggagaggtgctgttcgaa
aaactaaaaattactgacaaacctaagcgtactaaaaccaaacagtatgcaacaggggaa
gatgtgcttgaaaaactggcagacaaacacgaaatagtaccggccatattggagtttcgt
gggttaagtaaattgctcaacacttatgtggaagccctgcctaaactcgtaaacgataaa
acaggccgcatccacacctcctataaccaggctgtgacgagtaccggacgtttgagtagt
acaaatccaaacctgcaaaacatccccattcgcgacgaaaaaggaaaaattattcgtaaa
gcttttattccgcgcgacgatgagcatgttttgcttgcagctgattacagtcaaattgag
cttagaattatggcacacttaagccaggatgaagccatgcttgaagcatttaaaaacgac
gaggatattcatttatctacggctgcaaagctatttaaacttaaacctgaagatgtaacc
cgcgagcaacggggccaggcaaaaggcgtgaattttggtattatttacggtatctccgcc
ttcggcctatcgcaaaatacgggtatgtcgaataaagacgccaaacagcttatcgacaat
tattttgaaacctacccgaacgttaaagcctttatggacaaatcaattgcaacagctcgt
gaaaaaggttatgctgaaaccctcatgggtcggaaacgatttttgcccgatattaattct
aacaatcgcacggtacggagtgctgcggagcgcaacgccattaacgctcccattcagggc
tcttctgctgatatgatcaaggttgccatggtaagaattaaccgggcactgaaagagaag
caattaaaaagtcgcatgattatgcaggtgcacgatgaggtgattgttgatacccataaa
aacgaggtggatgaagttaagtcaattgttttggaagcaatggaaaatgccatttcactt
aaagtaaaaatgaaggtagatttgaatactggtaatgattggctcgaagcacattaa
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