Salinivirga cyanobacteriivorans: L21SP5_02310
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Entry
L21SP5_02310 CDS
T04172
Symbol
recQ_1
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
blq
Salinivirga cyanobacteriivorans
Pathway
blq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L21SP5_02310 (recQ_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blq03019
]
L21SP5_02310 (recQ_1)
03400 DNA repair and recombination proteins [BR:
blq03400
]
L21SP5_02310 (recQ_1)
Enzymes [BR:
blq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L21SP5_02310 (recQ_1)
Messenger RNA biogenesis [BR:
blq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L21SP5_02310 (recQ_1)
DNA repair and recombination proteins [BR:
blq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L21SP5_02310 (recQ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecQ-1-like_HTH
DEAD
RQC
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
AAT
Motif
Other DBs
NCBI-ProteinID:
ALO15942
UniProt:
A0A0S2I0X3
LinkDB
All DBs
Position
complement(2772517..2774706)
Genome browser
AA seq
729 aa
AA seq
DB search
MNEKHSKLSAELKKHFGFDTFKGNQEAIIENLLQNNDTFVLMPTGGGKSLCYQLPALLQE
GTAIVISPLIALMKNQVDAMRSYAGDDSIAHFLNSSLNKTEMTRVREDVLNNKTRLLYVA
PESLTKEENILFLKKANIQFYAIDEAHCISEWGHDFRPEYRRIRPIVETIGRAPIIALTA
TATPKVQHDIQKNLGMLEANVYKSSFRRHNLYYEIRPKKNVNKQIIKFLKDNQGKSGIIY
CLSRKKVEELAETLRVNGIKALAYHAGMDAATRTGNQDKFLMEEIDVIVATIAFGMGIDK
PDVRFVIHYDIPKSLESYYQETGRAGRDGGEGKCIAFYAYKDIQKLEKFMQGKPVAEQEI
GNQLLNEVVTYAESGVCRVQQLLNYFGETLEEPCGNCDNCLNPKETFEGKDYIVQIIETI
KAIKESFKADYISKLLAGVADSAIKSYKHHKSPLFGSGGDHDARFWNAIIRQALIKKLLR
KNIENYGLLTVTEKGEEFLKNPYAVTLYKEHEFPDDEQDDDVHSSSANTASADPVLFGML
KDLRKKIAKRKEIPPFVIFQDPSLQDMAIHYPISIEELQNMTGVGQGKAKRYGKDFVELI
KKYVDENEIERPEDMVVKSVVNKSGLKVYIIQSIDRKIPLDDIAAAKGMEMEDLLKEVEA
IVYSGTRLNIGYYIDQVVDEEKQDDVYAYFLEEAENESLENALDELGEEEYTEEDIRLMR
IKFFSEMAN
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaaacatagtaagcttagtgctgaattgaaaaagcattttggttttgatact
ttcaaagggaaccaggaagctattattgagaatttgcttcaaaacaatgatacatttgtt
ctaatgccaaccggtggtggtaaatcattatgttatcagctacctgcacttttacaagaa
ggaacagccatcgtcatttctccactaattgcattaatgaaaaaccaggtcgatgctatg
cgtagttatgccggagatgacagcattgctcattttttaaattcttctctaaataaaaca
gaaatgacaagggtgcgcgaagacgtactaaataacaaaaccaggttattatatgtagcg
ccggaatccctaactaaagaagaaaatattctttttcttaaaaaagctaatattcagttt
tacgctattgatgaagcacattgtatatcggaatgggggcatgatttcagaccagagtac
cgccgtataagaccaattgtagaaaccattggtcgcgcacccatcattgcactaacagct
actgccacaccaaaagttcaacacgatattcaaaagaatctgggtatgttggaggccaat
gtctataaatcatcattccgcaggcacaacctttactatgaaatacgccccaaaaagaac
gtcaacaaacaaatcataaaattcctgaaagataaccagggaaaatcaggtattatttat
tgtctcagccgtaaaaaagtagaagagcttgccgagacgcttcgcgtaaacggaataaaa
gcgctggcttaccatgcaggtatggatgccgctacccgcacaggcaaccaggacaaattc
ctaatggaagaaatcgatgtaattgtggcaaccattgcttttgggatgggaattgataag
ccggatgtacggtttgtaattcattacgatataccgaaaagtctggaaagctactaccag
gaaacaggacgcgcaggccgcgacggtggagaaggtaaatgcattgctttttatgcctat
aaagacatacaaaagcttgagaaatttatgcagggcaaacctgttgccgagcaagaaatt
ggtaatcaactgcttaacgaagttgtaacttatgcagaatcaggagtatgccgtgtgcag
cagttattaaactattttggagaaaccctggaagagccatgtggcaattgcgataactgc
cttaaccctaaagaaacctttgaagggaaggactatattgttcaaataattgagaccatt
aaggccataaaagagagctttaaggccgattatatatcaaaattgctcgctggtgtagcc
gattcagcaataaaatcatacaaacaccataaatcacctttattcggttcgggtggtgac
catgatgcccgtttctggaatgccatcatcaggcaggcgttaataaaaaaactgcttcgt
aagaatatcgaaaattatggactgctcacagttacagaaaaaggtgaagaattcttaaag
aatccttacgctgtaaccttatataaagaacacgagttccctgatgacgagcaggatgat
gacgtacatagctcaagtgcaaataccgcatcggcagatccggtgctatttggaatgctt
aaagatttacgtaaaaaaatagctaaacgtaaagagatacctccttttgtaattttccag
gatccatcgcttcaggacatggccatacactaccctatcagtatagaagaactccaaaac
atgactggcgtagggcaaggtaaagccaaaagatatggtaaagatttcgtggaattgata
aagaaatatgttgacgagaacgagattgaacggcccgaagatatggttgttaagtcagtt
gtcaataaatcagggttaaaagtatacatcatacaatctatcgatcgcaaaataccattg
gacgacattgctgctgcaaaaggaatggaaatggaagacctgcttaaagaagttgaagcc
attgtttattcgggtacacgattaaatattggttactacatcgaccaggttgtggatgaa
gaaaaacaagatgatgtatatgcgtattttctggaagaagcagaaaatgaatcccttgaa
aatgcgctggatgaacttggagaagaagagtatacagaagaagacatcaggttaatgcgc
attaagtttttctctgaaatggcaaattaa
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