KEGG   Salinivirga cyanobacteriivorans: L21SP5_02667
Entry
L21SP5_02667      CDS       T04172                                 
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
blq  Salinivirga cyanobacteriivorans
Pathway
blq03410  Base excision repair
blq03430  Mismatch repair
blq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:blq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    L21SP5_02667 (recJ)
   03430 Mismatch repair
    L21SP5_02667 (recJ)
   03440 Homologous recombination
    L21SP5_02667 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:blq03400]
    L21SP5_02667 (recJ)
DNA repair and recombination proteins [BR:blq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     L21SP5_02667 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     L21SP5_02667 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      L21SP5_02667 (recJ)
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1 DSPc
Other DBs
NCBI-ProteinID: ALO16290
UniProt: A0A0S2I1Y2
LinkDB
Position
complement(3213427..3215379)
AA seq 650 aa
MGRKFQNQNSQAITKNLLHLTFLHFNTSDFMPIFTFNFGVPSDSLFMANRNTYVSEKCSI
MEEKKWVIKEKGDPEVISKLAKELNIDEILAQLLIQRNITSFDQARAFFRPELKDLHDPF
LMVDMDKAVERINTALQRNERILVYGDYDVDGTTSVAMMYSFLHQFHKNIDYYIPDRYSE
GYGISEKSIEYAEKNNVSLVVALDCGIKAIDKIAMANEKNIDYVICDHHTPADTLPDAYA
ILDPKRADSQYPFKELSGCGVGFKLIQAFLSANNMDMSKAYEYLDMLAVSIASDIVPLIG
ENRVLAHYGLKKINDNPSVALKAIMEVSELDKHIVISDIVFKIGPRLNAAGRMDSGQMAV
DLLVSKELEEARAISQKIDNENKSRKDVDRQITNEALDLVMQEGLDSKKSIVLFNPNWLK
GVIGIVASRLVEHYYKPTIIFTRSNGLITGSARSVFGFNIYEAITECGDLLENYGGHMYA
AGLSIKEENFNIFKSRFEEVVRKRIKPDQTVQKIHADAVITLDQITPKFFRILKQFEPFG
PENMTPVFITENLYDSGFSRCVGKDGKHLKLMLADKKGGETLFPSIAFNQAEHWHKVADK
TNFHICYSIDENTYRNKTTIQLRIKDIHFNKYHSQKATEKITNSSTNKNS
NT seq 1953 nt   +upstreamnt  +downstreamnt
atgggtcgaaaatttcaaaaccaaaattcacaggcaattactaaaaatcttctccattta
acctttttgcattttaataccagcgattttatgcctatctttacgttcaattttggggtg
ccgtctgattctctgtttatggcaaatcggaacacctacgtgtcagaaaagtgcagcatt
atggaagaaaaaaaatgggttattaaggaaaaaggcgatcccgaagtcatttcaaaatta
gcaaaggaacttaatatagacgaaatactggcgcaattattaatacagcgcaacattacc
agtttcgaccaggccagggcatttttccgacccgagctcaaagatcttcacgatcctttt
ctaatggttgatatggacaaagctgtagaacgaatcaataccgccctgcagcgtaatgag
agaattctggtttatggtgattatgatgtggatggaactacatctgttgccatgatgtat
tcgttcctgcatcagtttcataaaaacatcgattactatatccccgacagatatagcgaa
ggctacggcatctcggaaaaaagtattgaatacgccgaaaaaaacaatgtttctttagtt
gttgcacttgattgtggtatcaaggccatagataaaattgccatggccaatgaaaaaaac
atcgattacgttatctgcgatcaccatacacccgcagacacgcttcctgatgcttacgct
attttagatccaaaaagagcagatagccagtatcccttcaaagagctatcgggatgcggg
gttgggtttaaactcattcaggcctttttatcagccaataatatggatatgagcaaagcc
tatgagtaccttgatatgttggcagtaagtatagcctcagatatcgtaccactcattggt
gaaaaccgggtacttgcccactatggacttaaaaaaatcaacgacaatccatcggtggca
ctcaaagctataatggaagtatcagaacttgataaacacattgtaatatccgatattgtt
ttcaaaattggcccaaggctcaatgcagcaggtcgcatggatagtggacaaatggcagtt
gatctgttagtatcgaaagagcttgaggaggcaagggccataagtcaaaaaattgacaat
gaaaacaaaagccgcaaagatgtagaccggcaaataaccaatgaagcacttgaccttgtc
atgcaagagggtttagactcaaagaagtctatcgtattatttaatccaaactggctcaag
ggggtaattggaattgtcgcatcaaggctggtcgaacattactacaaaccaactattatt
ttcacccgttcaaatggtctaattacagggtctgcaagatcggtatttggttttaatatt
tatgaagcaatcacagagtgtggcgacttgcttgaaaattatggtggccatatgtatgct
gctggattgtcaatcaaagaagaaaactttaacatattcaaatcaaggtttgaagaagtt
gtgcgcaaacgcataaaaccagaccaaacagttcagaaaatacacgccgatgcggtaata
acattagatcaaatcacacccaagtttttccgtatactcaagcaatttgaacctttcgga
ccagaaaacatgacgccggtttttattactgaaaatctatatgactcagggtttagtcgc
tgtgtaggtaaggacggaaagcacctgaagcttatgcttgccgacaaaaaaggcggcgaa
acgctcttcccgtctattgcgtttaatcaggctgaacactggcataaagttgcagataaa
accaatttccatatttgctacagcattgacgaaaacacttacagaaacaaaacaaccata
cagcttcgtataaaagacattcatttcaacaaataccatagtcagaaagcgactgaaaaa
atcacgaactcaagcacaaataaaaactcatga

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