Salinivirga cyanobacteriivorans: L21SP5_02667
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Entry
L21SP5_02667 CDS
T04172
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
blq
Salinivirga cyanobacteriivorans
Pathway
blq03410
Base excision repair
blq03430
Mismatch repair
blq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
blq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L21SP5_02667 (recJ)
03430 Mismatch repair
L21SP5_02667 (recJ)
03440 Homologous recombination
L21SP5_02667 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blq03400
]
L21SP5_02667 (recJ)
DNA repair and recombination proteins [BR:
blq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
L21SP5_02667 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
L21SP5_02667 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
L21SP5_02667 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
DSPc
Motif
Other DBs
NCBI-ProteinID:
ALO16290
UniProt:
A0A0S2I1Y2
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Position
complement(3213427..3215379)
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AA seq
650 aa
AA seq
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MGRKFQNQNSQAITKNLLHLTFLHFNTSDFMPIFTFNFGVPSDSLFMANRNTYVSEKCSI
MEEKKWVIKEKGDPEVISKLAKELNIDEILAQLLIQRNITSFDQARAFFRPELKDLHDPF
LMVDMDKAVERINTALQRNERILVYGDYDVDGTTSVAMMYSFLHQFHKNIDYYIPDRYSE
GYGISEKSIEYAEKNNVSLVVALDCGIKAIDKIAMANEKNIDYVICDHHTPADTLPDAYA
ILDPKRADSQYPFKELSGCGVGFKLIQAFLSANNMDMSKAYEYLDMLAVSIASDIVPLIG
ENRVLAHYGLKKINDNPSVALKAIMEVSELDKHIVISDIVFKIGPRLNAAGRMDSGQMAV
DLLVSKELEEARAISQKIDNENKSRKDVDRQITNEALDLVMQEGLDSKKSIVLFNPNWLK
GVIGIVASRLVEHYYKPTIIFTRSNGLITGSARSVFGFNIYEAITECGDLLENYGGHMYA
AGLSIKEENFNIFKSRFEEVVRKRIKPDQTVQKIHADAVITLDQITPKFFRILKQFEPFG
PENMTPVFITENLYDSGFSRCVGKDGKHLKLMLADKKGGETLFPSIAFNQAEHWHKVADK
TNFHICYSIDENTYRNKTTIQLRIKDIHFNKYHSQKATEKITNSSTNKNS
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgaaaatttcaaaaccaaaattcacaggcaattactaaaaatcttctccattta
acctttttgcattttaataccagcgattttatgcctatctttacgttcaattttggggtg
ccgtctgattctctgtttatggcaaatcggaacacctacgtgtcagaaaagtgcagcatt
atggaagaaaaaaaatgggttattaaggaaaaaggcgatcccgaagtcatttcaaaatta
gcaaaggaacttaatatagacgaaatactggcgcaattattaatacagcgcaacattacc
agtttcgaccaggccagggcatttttccgacccgagctcaaagatcttcacgatcctttt
ctaatggttgatatggacaaagctgtagaacgaatcaataccgccctgcagcgtaatgag
agaattctggtttatggtgattatgatgtggatggaactacatctgttgccatgatgtat
tcgttcctgcatcagtttcataaaaacatcgattactatatccccgacagatatagcgaa
ggctacggcatctcggaaaaaagtattgaatacgccgaaaaaaacaatgtttctttagtt
gttgcacttgattgtggtatcaaggccatagataaaattgccatggccaatgaaaaaaac
atcgattacgttatctgcgatcaccatacacccgcagacacgcttcctgatgcttacgct
attttagatccaaaaagagcagatagccagtatcccttcaaagagctatcgggatgcggg
gttgggtttaaactcattcaggcctttttatcagccaataatatggatatgagcaaagcc
tatgagtaccttgatatgttggcagtaagtatagcctcagatatcgtaccactcattggt
gaaaaccgggtacttgcccactatggacttaaaaaaatcaacgacaatccatcggtggca
ctcaaagctataatggaagtatcagaacttgataaacacattgtaatatccgatattgtt
ttcaaaattggcccaaggctcaatgcagcaggtcgcatggatagtggacaaatggcagtt
gatctgttagtatcgaaagagcttgaggaggcaagggccataagtcaaaaaattgacaat
gaaaacaaaagccgcaaagatgtagaccggcaaataaccaatgaagcacttgaccttgtc
atgcaagagggtttagactcaaagaagtctatcgtattatttaatccaaactggctcaag
ggggtaattggaattgtcgcatcaaggctggtcgaacattactacaaaccaactattatt
ttcacccgttcaaatggtctaattacagggtctgcaagatcggtatttggttttaatatt
tatgaagcaatcacagagtgtggcgacttgcttgaaaattatggtggccatatgtatgct
gctggattgtcaatcaaagaagaaaactttaacatattcaaatcaaggtttgaagaagtt
gtgcgcaaacgcataaaaccagaccaaacagttcagaaaatacacgccgatgcggtaata
acattagatcaaatcacacccaagtttttccgtatactcaagcaatttgaacctttcgga
ccagaaaacatgacgccggtttttattactgaaaatctatatgactcagggtttagtcgc
tgtgtaggtaaggacggaaagcacctgaagcttatgcttgccgacaaaaaaggcggcgaa
acgctcttcccgtctattgcgtttaatcaggctgaacactggcataaagttgcagataaa
accaatttccatatttgctacagcattgacgaaaacacttacagaaacaaaacaaccata
cagcttcgtataaaagacattcatttcaacaaataccatagtcagaaagcgactgaaaaa
atcacgaactcaagcacaaataaaaactcatga
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