Salinivirga cyanobacteriivorans: L21SP5_03329
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Entry
L21SP5_03329 CDS
T04172
Symbol
pcrA_2
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
blq
Salinivirga cyanobacteriivorans
Pathway
blq03420
Nucleotide excision repair
blq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
blq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L21SP5_03329 (pcrA_2)
03430 Mismatch repair
L21SP5_03329 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blq03400
]
L21SP5_03329 (pcrA_2)
Enzymes [BR:
blq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L21SP5_03329 (pcrA_2)
DNA repair and recombination proteins [BR:
blq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L21SP5_03329 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
L21SP5_03329 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
ResIII
PcrA_UvrD_tudor
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
ALO16942
UniProt:
A0A0S2I3K2
LinkDB
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Position
complement(4029726..4032053)
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AA seq
775 aa
AA seq
DB search
MHDYLKKLNEAQREAVVNTKGASLVIAGAGSGKTRVLTYRIAHLLANGVPPYKILALTFT
NKAAREMKQRIGEIVGFEHASNLWMGTFHSIFARILRYESAYLGYDSNYTIYDTSDSKNL
IKSIIKEKKLDEKTYKPGQILGRISRAKNNLITPSTYQNNSTYYSTDEAHRVPYTGQIYA
AYMKRCKISGAMDFDDLLLNTNILLRDHKAVLEKYQQKFDYILVDEYQDTNFAQYLILKK
LAEKHHNICVVGDDSQSIYAFRGAKIENILNFQKDYPEMKVFKLEHNYRSTQNIVNAANS
VIANNQKQLPKKVFTENDEGEKIGIVRAITEVEEGHLIANSIQEKRLNEQKKFSDFAILY
RTNAQSRILEEALRKRNIPYRIYGGLSFYQRKEIKDLVGYLRMTINPNDDEALKRIINYP
ARGIGSTTMSKLESAATANGISIWQVLAAPQNYGVNINSGTTKKLQGFIILVQQFTELAA
NNDAYDAAIQIASNSGLLKDLYNDKSPEGRSRYENIQELLNGIKDFVSNAHEEGTDVKLH
TYIENIALLTDMDKNKDEDQERITLMTIHSAKGLEFQHLYIAGLEEGLFPSSMSMESPEE
IEEERRLFYVALTRAEQTASLYWCQSRYKWGSVESKSPSRFLKELDQAYIEATSDDNYSF
ENPEPGQTHFRKPGSQPAFQNSSTRKSGTIKSRNMRQPMRSRPTANQGPAADPNFTPDPP
ENIKEGQTVIHQRFGRGEITRIEGEGTNRKASVQFASGRKTLLLRFAKLKVIKAS
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgcatgattacctcaagaaactcaatgaggcacaaagagaagctgtagttaacacaaaa
ggagcatcactggtaattgccggtgccggatcaggcaaaacgcgagttttaacataccgg
attgcccacttgctggccaatggtgtacctccgtataaaattcttgcactcacctttacc
aataaagctgccagggaaatgaaacagcgtattggcgaaatagtagggttcgaacacgca
tcaaacctctggatggggacttttcactcaattttcgcccgtattttacgctatgaatca
gcctatctgggttacgattctaactatacaatttatgatacttcagatagtaaaaacctg
ataaaaagcatcataaaagaaaaaaaactggatgaaaagacttacaagcccgggcaaatc
cttggtagaatatcgcgggcaaagaataatctgattacgccctcaacctatcaaaacaac
tcaacttattattccaccgatgaagcccaccgtgtaccatacaccggtcaaatatacgcc
gcttatatgaaacgttgtaaaatttctggggcaatggattttgacgatctgttactcaac
accaacatattgctgcgcgaccataaagcggtgcttgaaaagtatcagcaaaaatttgac
tatatacttgtcgacgagtaccaggatacaaatttcgctcaatacctaattttgaaaaaa
ctggccgaaaagcaccacaacatttgtgtggttggcgacgattcgcaaagtatttacgcc
ttcaggggtgctaaaattgaaaacatactcaatttccagaaagattatccggaaatgaaa
gtattcaaactggagcacaactaccgttcgacccaaaacattgtaaatgcagccaacagc
gtaatagccaacaatcaaaaacagctgccgaaaaaggttttcactgaaaacgacgaagga
gaaaaaataggcatcgttcgcgccattacagaagtcgaagaaggccatctaatagccaat
tccattcaggaaaaacggttaaatgagcagaaaaaattcagcgattttgccattttatat
cgaaccaatgcgcaatcgcgtatccttgaagaagccttgcgcaaaagaaatattccgtat
cgcatatacggaggtctgtcattttatcagcgtaaagaaatcaaagacctggtaggatat
ttacgcatgaccatcaaccctaacgatgatgaagcactcaaacgtataatcaattacccg
gccaggggaattggcagtaccacaatgtcgaaacttgaatcggctgcaacagccaatgga
atttcaatatggcaggtacttgctgcaccacaaaattatggagtaaatatcaacagcggc
accaccaaaaagctccagggttttattatcctggtgcagcaattcacagaacttgcagcc
aataacgatgcctatgatgctgccattcaaattgcctctaactcgggcttacttaaagac
ctatacaacgacaaatctcccgaaggtagaagccgttatgaaaatatacaggaattactc
aacggaatcaaggattttgtttccaatgcacacgaggaaggtaccgatgtaaaactacac
acctacattgaaaatattgccttactcaccgatatggataaaaacaaggatgaagaccag
gaacgcattaccctaatgaccatacactctgccaaaggactggaatttcagcacctttat
attgcaggccttgaagaaggtttattcccctcatccatgtcgatggagagcccggaggag
atagaagaagaaagacgtcttttttatgtagcgcttacacgcgcagagcaaacagccagc
ctgtattggtgccaaagccgctataaatggggttctgtagagtcaaaaagccctagcagg
tttttaaaagagctggatcaggcctatattgaagctacctctgatgataactacagcttt
gagaatcccgaacccggtcaaacacattttcgcaaacccgggtcgcaacccgcatttcag
aattcttctaccagaaaatccggcacaattaaaagccgaaatatgcggcaacccatgcgc
tcaaggcctacagcaaatcaaggtccagcagcagacccaaactttacacctgatccgcca
gaaaatattaaagagggacaaaccgtcatacatcaaagatttggaagaggcgaaataaca
cgtattgaaggcgaaggcaccaaccggaaggcaagtgtgcaattcgcaagtggccgaaaa
acccttttgcttagatttgctaaactaaaagtcattaaagcaagctag
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