Salinivirga cyanobacteriivorans: L21SP5_03389
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Entry
L21SP5_03389 CDS
T04172
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
blq
Salinivirga cyanobacteriivorans
Pathway
blq03030
DNA replication
blq03430
Mismatch repair
blq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
blq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L21SP5_03389 (polC)
03430 Mismatch repair
L21SP5_03389 (polC)
03440 Homologous recombination
L21SP5_03389 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blq03032
]
L21SP5_03389 (polC)
03400 DNA repair and recombination proteins [BR:
blq03400
]
L21SP5_03389 (polC)
Enzymes [BR:
blq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L21SP5_03389 (polC)
DNA replication proteins [BR:
blq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L21SP5_03389 (polC)
DNA repair and recombination proteins [BR:
blq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L21SP5_03389 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Rv2179c-like
BUD22
SepF
Motif
Other DBs
NCBI-ProteinID:
ALO17002
UniProt:
A0A0S2I451
LinkDB
All DBs
Position
4097063..4097869
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AA seq
268 aa
AA seq
DB search
MELNLQKPIVFFDLETTGIDIVNDRIIEFSFIKIHTDQSEETWTQRVNPGMPIPPKSTEI
HGIKDEDVADKPLFKDVAKKVAAFIEGCDLGGFNSNKFDIPMLAEELARADVDIDLKKVR
HIDVQTIFHKMEQRTLEAAYKFYCQKDLTEAHTAEADTRATYEVLKAQLDRYKDVDFKDK
AGKISQPVINDIDQLAEFSTQNRNVDFAGRVVYNNDGEEVFNFGKYKYTPVEEVFEKDPG
YYSWILNSDFPSYTKRVLTAIKLRKMMQ
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaatcttcagaaaccaattgtttttttcgatcttgaaacaaccggtatcgac
attgtaaacgatcgtattatagaattctctttcattaaaattcatactgatcagagtgag
gaaacatggacccagcgtgtgaaccctggtatgcctatccctccaaaatctaccgaaata
catggtataaaagatgaggatgtggctgataaacctctttttaaagatgtggctaaaaaa
gttgccgcttttattgaagggtgcgatttgggcggttttaactccaataagttcgatata
cctatgcttgccgaagagcttgcaagggccgatgtggatatcgatcttaagaaggtccgt
catatcgatgtacagacaattttccacaaaatggagcaaagaacgcttgaggctgcttac
aaattctactgccagaaagaccttacagaagcacatacagcagaagcagatacccgcgca
acctatgaagtgctaaaagctcagctcgatcggtacaaagatgtggattttaaagataaa
gcagggaaaatatcacagccagtgattaacgatatagaccagcttgctgagttttctaca
caaaaccgtaatgtagattttgcaggccgcgttgtctataataacgatggtgaagaggtt
tttaattttggaaaatataagtatacgccggttgaggaggttttcgaaaaagaccccggt
tactattcatggattctgaacagcgactttccatcatacacaaaacgtgtattaacggca
attaagctcagaaaaatgatgcaataa
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