Salinivirga cyanobacteriivorans: L21SP5_03456
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Entry
L21SP5_03456 CDS
T04172
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
blq
Salinivirga cyanobacteriivorans
Pathway
blq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L21SP5_03456 (recQ_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blq03019
]
L21SP5_03456 (recQ_2)
03400 DNA repair and recombination proteins [BR:
blq03400
]
L21SP5_03456 (recQ_2)
Enzymes [BR:
blq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L21SP5_03456 (recQ_2)
Messenger RNA biogenesis [BR:
blq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L21SP5_03456 (recQ_2)
DNA repair and recombination proteins [BR:
blq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L21SP5_03456 (recQ_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
Helicase_C_2
DUF3052
Motif
Other DBs
NCBI-ProteinID:
ALO17067
UniProt:
A0A0S2I4E6
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All DBs
Position
4198085..4200043
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AA seq
652 aa
AA seq
DB search
MSLAVQFLYLCKYRAIVRTYMDRYQKILKDHWGYDDFRPMQHEIIASVGSGQDTLGLLPT
GGGKSLTFQVPSLAQDGICIVVTPLIALMKDQVYNLRERGIKALAIYSGLSKDEIDTALN
NCIYGDYKFLYVSPERLGTELFRIRVQGMNVNLIAIDEAHCISQWGYDFRPAYLEIANLR
ELIPNTPFLALTATATPKVVDDIMDKLQFKQRNVFKKSFERKNLVYWVKHSDDKLNDLTR
LCQRNKGTGVVYVRSRRRTREISEHLQRNRINADYYHAGLSAERRDEKQEEWKSNRTRII
VATNAFGMGIDKPDVRFVVHMDLPDSLEAYFQEAGRGGRDEKKAYGILLYNKQDHTRLKQ
SFTNSFPDIKLIKQIYESLGNFYNLAVGSGKGMSFDFILADFAKTYRYSMIQAYNALKVL
QSEGYIELTDSVHNPSKIKFLVHRDELYEFQVANAAFDRLIKLILRSYTGLFTDFVAIDE
LMLARRAKSSVEVIFKYLQRLNNLKIVRYIPQKNNPIVFYREERLSRENLYISRENYDFR
KNMAANKLKAAVYYAETQDRCRSQILLQYFGQKNAPECGQCDYCVKKQKQQPLPNKVITQ
NILDALEEKPLLPKDLKDKFHDHQEAFLERIRELMERGIIVRDEDGKLCLKK
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagtttggctgttcaatttttatatctttgtaaatatcgcgctatagttcgcacatat
atggacagataccaaaaaatacttaaagaccattggggctatgatgattttcgaccaatg
cagcatgaaattatagcatcggtgggaagtggtcaggatacccttggtttgctgccaacc
ggaggtggaaaatcgcttactttccaggttccgtcgttggcacaggatggtatttgcatt
gtggtaacaccgcttattgctcttatgaaagaccaggtttataatttgagggaacgcggc
ataaaggcccttgccatttacagcggactatcgaaagatgaaatcgatacagcattgaac
aactgcatttatggcgattataaatttttgtacgtatcgcccgagcggttgggtacagag
ctgtttcgtatacgcgtgcagggtatgaatgtgaacttgatagcaattgatgaggcacat
tgcatttcgcaatggggctacgattttagaccggcttatctggaaatagctaatttgcgg
gagttgattccaaatacaccctttttggcgctgactgccactgctacaccaaaagtagtg
gacgacataatggataagctgcagtttaagcagcgcaatgtttttaaaaagagcttcgaa
cgaaaaaacctggtgtattgggtaaaacattcagacgataagctcaacgaccttacccgg
ctttgccaacgaaacaaggggacgggtgtggtgtatgtgcgtagccgtcgcagaacacgc
gaaatttctgaacatctgcaacgtaatcgcatcaatgctgattattaccatgcaggctta
tcggcagagcggcgcgatgaaaagcaggaggagtggaaaagcaatcgcacccgaatcatc
gtagccacaaatgcctttggtatgggaattgacaaacccgacgtgcgatttgtggtgcat
atggatttacccgattcgctcgaggcctattttcaggaagcgggcaggggcggacgagat
gagaagaaagcttacggcattttattgtacaataaacaagaccatacacggctaaagcag
agttttacgaacagctttccggacattaaactgattaaacaaatatatgagtcgctggga
aatttttataacctggctgtgggctctggaaaaggcatgagctttgattttatactggcc
gattttgctaaaacttatcgttacagcatgattcaggcctataatgcccttaaagtccta
caatcggaaggttatatagagcttacagatagcgtacacaacccaagtaaaataaaattt
cttgtccaccgcgatgagttgtatgagtttcaggtagccaatgctgcattcgacaggctc
attaaattgattttgcgtagttacacaggcctatttaccgattttgtagccattgatgag
cttatgcttgcacgccgcgccaaaagttcagtggaggtgatttttaaatacctgcaacgc
ctcaataacctgaagattgtccgctatattccgcaaaaaaacaacccgattgtgttttat
cgcgaagagcgtctttcgcgagaaaacttgtacatatcgcgagaaaactacgattttcgt
aaaaatatggcagccaataaacttaaggcagccgtgtattatgccgaaacgcaggaccgt
tgccggagccagattttattacaatacttcggacaaaagaatgcaccggaatgcggccaa
tgcgattactgtgtgaaaaagcaaaaacaacaacccttacccaacaaagttattacacaa
aatattttagacgctttagaggaaaagccgctattacccaaggacttaaaagataaattc
cacgaccaccaggaagcatttttagagcgcatcagagagcttatggagcggggaatcatt
gttcgtgacgaagatggaaagctttgtttgaaaaaatga
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