Salinivirga cyanobacteriivorans: L21SP5_03533
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Entry
L21SP5_03533 CDS
T04172
Symbol
oprF_5
Name
(GenBank) Root adhesin
Organism
blq
Salinivirga cyanobacteriivorans
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Gene cluster
GFIT
Motif
Pfam:
OmpA
PD40
TPR_1
TPR_11
DUF748
CarboxypepD_reg
TPR_2
TPR_12
TPR_16
PPIP5K2_N
fn1
TPR_6
Motif
Other DBs
NCBI-ProteinID:
ALO17141
UniProt:
A0A0S2I4M2
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Position
4315091..4317136
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AA seq
681 aa
AA seq
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MAQRIFTTIILLTMAGMLAAQNVPFDKSYFKDRKSEFRDARSHYNDGDDYFDNMQYYLAL
QSYLKAHDFNPDNARLNFQIGVSYMASVQSYKSLKYFLRARELDAAVSRDIMYYIGRGYH
MNGQYKKALEAYREYKKGLLPNQVEDIEYTSKHIKECETALELVDKPARAFIDNLRDINT
GYTEHSPVITADESKMMFTSTREGSVGGRMDDFTQEYDEDIYISYKVNDRWTRPVNAGEP
LNSHMNDATVGLASDGQLLLIYNGRKRNGDIQSSMLEGDEWSYPDWLPRSVNSGEKETSA
SLANNDQVLYFISGREGGYGGKDVYVVHKDRRGNWGDARNLGPAINTQYDEESVFMHPDG
RTLYFSSKGHNTIGGFDIFRAILGDDGKWGKPENVGMPINTPDDDLSLVLSADGRHGYFS
STREGGKGRYDIYQITFLGPEKPLYLSNEDQLLASFEKSVSDNVLEKSVEIKTIRLTVVK
GVVKDAITNEPIKANIEVVDNDKDEIVFNNVSNSKTGRFLVTLPSGKNYGLAVKAENYLF
HSENFNIPKATAYQEIEKEILLNNVKKDVKIVLKNVFFDQGKAVLRPTSYPELNRLAKLL
KDVPTLKIEISGHTDNTGSATFNQKLSEDRAKAVVEYIKAQEISADRLTYVGYGETQPIA
DNTTKDGRQQNRRVEFKVLSK
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaagaatatttacaacaatcatattgctcaccatggccggtatgcttgccgcc
cagaatgtaccattcgacaaatcgtattttaaagaccgcaaaagtgaattccgcgatgca
cggagccattacaacgatggcgacgattactttgacaatatgcaatactatcttgcattg
cagagttaccttaaggcacacgattttaacccggataatgccagactcaattttcagatt
ggtgtaagttatatggcgtcggtgcagagctacaaatccctaaaatattttttacgggca
cgtgaacttgatgctgcagtgagccgtgatattatgtactacataggccgggggtaccac
atgaacggccagtacaagaaagccctcgaggcctatcgtgaatacaaaaaaggactgctg
cccaaccaggtcgaagatattgaatatacatccaaacacattaaagagtgcgaaacagcc
cttgaactggtcgataagcctgcacgggcttttatcgataatttgagggatatcaatacc
ggttatactgaacacagcccggtgataacagccgatgaatcgaaaatgatgttcacttcc
acaagagaaggttctgtaggcggccgcatggatgatttcacccaggaatacgacgaagat
atttacatttcttacaaagtaaacgaccgatggacccgtccggtaaacgcaggtgaaccg
cttaattctcatatgaacgacgctacagtaggccttgcctcagacgggcaattgctgctc
atttacaatggccgtaaacgcaatggcgacattcagtcgtcgatgcttgaaggtgatgag
tggagttatcccgattggttgccacgtagtgtaaacagtggcgaaaaagaaacctctgcc
tcgttggccaataatgaccaggtgctgtattttatcagtggtcgtgaaggcggatatggt
ggtaaagatgtttacgtagtgcacaaagaccgccgcggaaactggggcgatgcacgtaat
cttggacctgccatcaatacccagtacgatgaagagagtgtgtttatgcaccctgacggc
cgtaccctttattttagctccaaagggcacaataccattggcggtttcgatattttcaga
gccatacttggagatgacggcaaatggggtaaaccagaaaatgtgggtatgccaattaat
accccggatgatgacctttcgcttgtgctctctgcagatggccggcatggatatttttcc
tccacccgagagggaggtaagggccggtatgatatctatcaaattacgttcctcggaccc
gaaaaaccactctatttaagtaacgaggatcaattgttggccagtttcgagaaatctgtt
agcgacaacgtgctcgaaaaatcagttgaaattaaaaccattaggcttactgtagtaaaa
ggtgtggtaaaagatgccattaccaatgagcccataaaagccaatattgaagtggtggat
aacgacaaggatgagattgtgtttaacaatgtttcgaatagtaaaaccggccgattcctg
gttaccctgccttctggtaaaaactatgggttggctgtaaaggcggaaaattacctgttc
cactcagaaaactttaatatacccaaagctacggcgtaccaggagattgagaaggagatc
ctgttgaataatgtgaaaaaggatgtgaaaatagtgctgaaaaacgtctttttcgatcag
ggtaaggctgttttaaggcccacttcgtatcctgagttgaaccgcctggctaagctgctg
aaagatgtgcccacccttaaaatagagatttcgggacatacagataacacgggaagtgcc
actttcaatcaaaagttgagtgaagaccgtgccaaagccgtggtcgaatacattaaggcc
caggaaatttcagccgaccggttaacttatgtaggttacggtgaaacccagcccattgcc
gacaacacgaccaaagacggccgccagcaaaaccgccgggtagagtttaaggtactcagt
aaataa
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