Entry |
|
Symbol |
pcrA
|
Name |
(GenBank) ATP-dependent DNA helicase PcrA
|
KO |
|
Organism |
blr Brevibacillus laterosporus
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:blr00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BRLA_c005090 (pcrA)
03430 Mismatch repair
BRLA_c005090 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:blr03400]
BRLA_c005090 (pcrA)
Enzymes [BR:blr01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BRLA_c005090 (pcrA)
DNA repair and recombination proteins [BR:blr03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BRLA_c005090 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
BRLA_c005090 (pcrA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
484047..486404
|
AA seq |
785 aa
MLAQDNFFAGLNPEQKKAVETTEGPVLILAGAGSGKTRVLTQRISYLVGYKQAFPWSILA
ITFTNKAAREMKERVERMVGRDAGADDIWISTFHSLCVRILRRDVDRINISRNFTILDAG
DQLTVVKQCMKELNIDVKKFEPRSILGAISGAKNELLDPKRYEQVAGDQFQRIVAQVYEL
YMKKLKTNQSLDFDDLIMTTIRLFKEVPEVLEFYQRKFKYIHVDEYQDTNRAQYMLISML
ADMHKNICCVGDADQSIYKWRGADISIILNFEKEYPHAKLIKLEQNYRSTKTILEAANYV
IKNNKNRKEKNLWTNKEAGDKIYCYQAESEHDEAYFVVDMIREQLKTYKRYDKFAILYRT
NAQSRVLEDVLVKSTIPYTIVGGTKFYDRKEIKDVLAYLRLVSNPDDDISLTRIINVPKR
NIGDTTVEKLQAYASSHGLTLFQAVQEVAYMGLASRTTNAILAFSDMIKNLMQMVDYLSV
TELVEEILKQSGYRESLKEDKSLEAAARLENIDEFLSVTQEFEKKSEDKTLLAFLTDLAL
VADIDSLGNDDTEEAVPDDGQVVLMTLHSAKGLEFPVVFLVGMEEGVFPHSRALFDDSEM
EEERRLAYVGITRAEQKLFMTRARMRTLYGRTNMNMQSRFFMEIPEELLTGDLGSGGGSE
GGFGSSGVFGSGSGFGAGRKGQPGRFGAGGRTGGTFGRSPKPTESTVSMQPSAFRGLNQA
TKLPAHGAASQTDWKVGDKAKHGKWGTGTVVSVKGAGDNTELDIAFPSPVGIKKLLAKFA
PIEKG |
NT seq |
2358 nt +upstreamnt +downstreamnt
atgttagctcaagataattttttcgcgggtttaaatcctgaacagaaaaaagcagtggag
accacagagggaccagtgctgattctggcaggcgcaggcagtggtaaaacccgcgttctt
acccaacgaatttcatatctagttggatataagcaggcgtttccttggagcattctggcg
attacctttaccaataaagcggctcgtgagatgaaagagcgtgtggaaagaatggttggt
cgggatgctggagcggatgatatttggatttctactttccattctctgtgtgtacgcatt
ttacgaagagatgtcgatcggattaacattagccgtaattttaccattttggatgcgggc
gatcagttgactgtggtcaagcagtgtatgaaagaactaaatattgatgtgaaaaaattt
gaaccacggtctattttaggcgcaattagtggagcgaagaacgaattgctagatccaaag
cgttatgagcaagtagcgggagatcagttccagcgcattgtagcacaagtgtatgagctg
tacatgaagaagctgaaaacgaaccaatcgcttgattttgatgacctaatcatgacgacg
attcgcttatttaaagaagtgccggaagtgttggaattctatcagcgcaagttcaaatat
atccatgtagatgagtatcaggatacaaaccgtgcccaatatatgctgattagtatgctt
gccgacatgcacaaaaacatttgctgtgtgggtgatgcagaccagagtatttataaatgg
cgcggtgctgatatttcgatcattcttaactttgagaaggaatatcctcatgcgaaatta
ataaagctggagcaaaactatcgctcgacgaaaactatcttagaagcagctaactacgtc
attaaaaataataagaaccgcaaagagaaaaatctgtggaccaacaaagaggcaggagac
aaaatttattgctatcaggctgaatcagagcatgacgaagcctactttgtggtggatatg
attcgagaacaactgaaaacctataaacgatacgacaaatttgccattttatatcgtacg
aatgcccagtcgcgtgtactggaggatgtgttggttaaatcgactattccttataccatc
gtcggaggcacgaagttctacgatcgcaaggagattaaagatgtactagcttatttacgc
ttagtatccaatcctgacgatgatatcagcttgacccgtattattaatgtaccaaagcgt
aatataggggataccacggtagaaaagctgcaagcctatgccagctcacatggtttgaca
ctctttcaagccgtccaggaagtagcgtatatggggcttgcctctcgaacaaccaatgct
attttagccttctcggatatgataaagaacctgatgcagatggtggattatttaagtgta
accgagcttgttgaggaaatcttgaagcaatcgggctatcgtgaatcgttaaaagaggat
aaatcactagaagcagcggctcgtttagaaaacatcgacgagtttctgtccgttacgcaa
gaatttgagaaaaagagcgaggataaaaccttgctggcttttctaactgacctagcattg
gtggcagacattgattcacttggcaatgatgatacagaggaagcggtaccagatgatgga
caagtcgtgctaatgaccttgcacagcgctaagggcttggagtttcctgttgtcttccta
gtaggtatggaggaaggagttttccctcatagtcgcgctctatttgatgacagtgaaatg
gaagaggaacgacgtctggcttatgtgggaattactcgtgccgaacaaaaattatttatg
acacgagcaagaatgcgtacgctatatggacgtacaaatatgaatatgcaatcccgcttt
ttcatggaaataccagaggaattacttactggtgacctcggttcaggcggtgggtctgaa
ggtggttttggttcaagtggcgtcttcggctcaggctcaggatttggtgctggccgcaaa
ggtcaacccggtcgatttggagcaggcggacgtacagggggtacatttggacgttcccct
aaacctacagaatccactgtctcaatgcagccaagcgcatttcgtggcttgaaccaggca
acaaaattgccggcacacggagcagcctcgcaaacagattggaaggtaggagataaggct
aagcatggtaaatggggaacaggaacagtggttagtgttaaaggtgcaggtgacaacacc
gagctggatattgccttccctagtccagtaggcattaagaaattacttgctaagtttgct
cctattgaaaaaggttga |