Brevibacillus laterosporus: BRLA_c020570
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Entry
BRLA_c020570 CDS
T03762
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
blr
Brevibacillus laterosporus
Brite
KEGG Orthology (KO) [BR:
blr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
blr03016
]
BRLA_c020570
Enzymes [BR:
blr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
BRLA_c020570
Transfer RNA biogenesis [BR:
blr03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
BRLA_c020570
Prokaryotic type
tRNA splicing ligases
BRLA_c020570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AIG26378
UniProt:
A0A075R5C4
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All DBs
Position
2187178..2188401
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AA seq
407 aa
AA seq
DB search
MYQTIQNVRVWGTPLDNAVSQAVTCAQHGNVVQVLLMADHHKGYSQPVGGVVVYEGQISP
SGVGYDIACGNKAVRTNLLYRDIQQKMPAIMNKIAKRISFGMGRVNKEKVDHELFDDDNW
NVYKQIGKKEYQSLYSLAHNQLGTVGSGNHFVDIFVEEATDVVWIANHFGSRGFGHKTAS
GFLNLAHGRSFSDKTPGESMDQAPTLLDLDTEIGDMYLRAMSLAGKYAYAGRDYVIDQVL
KILGASSTFEVHNHHNFAWKEIHDQKEYVVVRKGATPSAPGQLGFIGGSMGDISVIVQGK
DSKENKEAFYSTVHGAGRMMSRTEAAGRLNWKTRKRSGGKITEEQMKKAVQDFGVELRGA
GPDESPFVYKKLQDVLQAHAETLDVLHVLKPVGVCMAGADEFDPYKD
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaaacgattcaaaatgtgcgtgtctggggaacacccctagataatgctgtctcg
caagctgtaacttgcgctcagcatggaaatgttgtgcaggtgttattgatggcagatcat
cataaagggtactcccaaccggttgggggagttgtcgtctacgaaggacaaatctcccca
tctggggtaggttatgatatagcatgcggaaacaaggctgttcgtactaatttactgtat
cgggatattcagcaaaaaatgcctgctatcatgaacaaaattgccaagcgaatctctttt
ggaatgggccgcgttaataaagaaaaagtagatcacgagctgtttgatgatgataactgg
aacgtgtataagcaaattggcaaaaaagaataccaatccctttattcattggcgcacaac
caattagggacggtaggtagcggtaatcattttgtcgatatttttgtggaagaagctacg
gacgtcgtatggattgcgaatcattttggcagtcgtggctttggtcataagactgcaagt
gggtttcttaatttggctcacggtcgtagtttttccgacaagacaccaggagagtccatg
gatcaagcaccgactctgctagatttagatacggaaattggtgatatgtatctgcgagca
atgagcttagccggtaagtatgcttatgcaggacgggattatgtgattgatcaggtatta
aaaattttaggagcctccagtacgtttgaggtgcacaatcatcataattttgcatggaag
gaaatacatgatcagaaggagtatgttgttgtacgtaaaggggcaactccttcagctccg
ggtcagcttggatttattggtggtagtatgggagatatttctgtcattgttcaaggaaag
gattcgaaggaaaataaagaagctttttacagtacggtgcatggtgcgggtagaatgatg
agccgaacagaggccgccggtcggcttaattggaaaactcgcaagcgtagcggaggaaag
attaccgaggagcagatgaaaaaagcggtgcaggattttggggtagagcttcgaggtgca
ggacccgatgaaagtcccttcgtttataaaaagcttcaggacgtcctacaagctcacgcc
gaaactctggacgttttacatgtgttaaagcctgtaggagtatgcatggcaggggcggat
gagtttgatccgtataaggattaa
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