Brevibacillus laterosporus: BRLA_c039840
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Entry
BRLA_c039840 CDS
T03762
Symbol
cshA_4
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
blr
Brevibacillus laterosporus
Pathway
blr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BRLA_c039840 (cshA_4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blr03019
]
BRLA_c039840 (cshA_4)
03009 Ribosome biogenesis [BR:
blr03009
]
BRLA_c039840 (cshA_4)
Enzymes [BR:
blr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BRLA_c039840 (cshA_4)
Messenger RNA biogenesis [BR:
blr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BRLA_c039840 (cshA_4)
Ribosome biogenesis [BR:
blr03009
]
Prokaryotic type
rRNA helicases
BRLA_c039840 (cshA_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_19
AAA_22
Flavi_DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AIG28267
UniProt:
A0A075R6M5
LinkDB
All DBs
Position
complement(4375123..4376583)
Genome browser
AA seq
486 aa
AA seq
DB search
MAKFEQFGLRPEIMQGISDLFYKEPTAIQEEAIPLILEGKDVIGQAQTGTGKTAAFVLPI
LQKLQEGKKDIQTLILTPTRELSIQIASEIEKLGKHLNMSVLSLHGGTDIERQMNKLKGT
VHIVVGTPGRVLDHMRRETLHFGRIHTLVLDEADKMLEMGFLEDVEKIIVSTPSSRQVLL
FSATMPDMVKKLGQRFMKQPPHIKIESKQKTVANITQEYYVINQTDKIDALLDLIEVTKP
FLGIIFANTQQRVKILTTRLQEAGYDAKALYGDLSQKKRETLMKDFRNMKFQFLVATDIA
ARGLDVEGVTHVFNYDIPSDVESYIHRVGRTGRANQLGNSISFVTPRQKSVMARFGSATK
ADIEEKLLTHTRHLDAGRKARAAEREQHYTELKTEKKKQQQIAKAEKEAPLKNALVKNKK
VKPGYKRKLKQEMEEWKTQYDRNQKREEAKKTAKANKGKAKPRSGGQSAAGRPGQAPSRP
GKRFGK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggctaagttcgaacaatttggtttgcgaccggagattatgcaggggatttccgacctg
ttttataaagagccgacagctattcaagaagaagcgattccattgattttagaaggtaag
gatgtcatcggacaagcgcaaacgggtactgggaaaacagcagcgtttgtattgccgatc
ctccaaaagctacaggaaggaaaaaaggatatccagacattgatccttactccaacccgt
gagctttctattcagattgctagtgaaattgagaagctggggaaacacctgaatatgagt
gttttatccttgcatggcggtacagatattgaacgtcaaatgaataagctaaaagggact
gttcatatcgtagtgggaactccaggacgcgtacttgatcatatgcgtcgtgaaacacta
cattttggccgcattcatacattggtattggatgaggctgacaagatgctagagatgggc
tttttagaggatgtggaaaagattattgtttccacaccaagcagccgacaggtattgcta
ttctcggcgactatgcctgatatggtaaagaagctgggacaacgttttatgaagcaaccg
ccgcatattaaaattgaatcaaagcaaaaaacggttgctaatatcacacaagaatactat
gtaatcaatcaaacagataaaatcgatgcgcttcttgatctcattgaggtcactaagcca
ttcctaggtattatttttgctaacacacaacagcgcgtaaagatcttaacaacacgttta
caagaggctggctatgatgccaaagcgttatacggtgatttgtctcaaaagaaacgcgaa
accctgatgaaggattttcggaatatgaaattccagtttcttgtagctaccgatattgcg
gctcgcggacttgatgtcgaaggggttactcatgtatttaactacgatatcccaagcgat
gtagaaagctatattcaccgtgttggacgtacgggacgcgctaatcagcttggaaattct
atttcttttgtgactccacgccaaaaaagcgtcatggctcgctttggttctgcaacaaag
gcggatatcgaagaaaaattacttacgcatactcgtcacttggatgcagggcgcaaagca
cgtgcagcagagcgtgagcagcattatactgagctcaaaaccgagaagaagaaacagcag
caaattgcaaaagcagaaaaagaagctccacttaaaaatgctcttgtgaaaaataaaaag
gtaaagcctggttataagcgtaagctgaagcaagaaatggaagagtggaaaacacaatac
gaccgtaatcaaaagcgtgaagaagcaaagaaaactgctaaagcaaataaaggtaaagca
aaacctcgttcaggaggacagtcagcggctggtcgtccgggacaagcaccaagcagacct
ggtaaacgctttggcaaataa
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