Bifidobacterium animalis subsp. lactis Bi-07: W91_1122
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Entry
W91_1122 CDS
T02080
Name
(GenBank) Topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bls
Bifidobacterium animalis subsp. lactis Bi-07
Brite
KEGG Orthology (KO) [BR:
bls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bls03032
]
W91_1122
03400 DNA repair and recombination proteins [BR:
bls03400
]
W91_1122
Enzymes [BR:
bls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
W91_1122
DNA replication proteins [BR:
bls03032
]
Prokaryotic type
DNA Topoisomerases
W91_1122
DNA repair and recombination proteins [BR:
bls03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
W91_1122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Inp1
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AFJ18401
LinkDB
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Position
1256711..1259386
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AA seq
891 aa
AA seq
DB search
MTRRRQAAAGYDPRQVEEHIVETPLAEEMSKSFLEYAYSVIYARALPDARDGMKPVQRRI
VYQMGQMNLLPTRPYMKSARVVGEVMGKLHPHGDSAIYEAMVRLAQPFAMRLPLVDGHGN
FGSLDDGPAASRYTEARLAPAALGMNADIDEDTVDFVPNYDNKLKEPTVLPSAIPNLLVN
GASGIAVGMATNMATHNLGEVVAAAKYVMKHPDATLDDLMQYVPGPDWPGGGIIIGRQGI
RDAYETGRGVVTTRSATHVENLTARKKAIVVTQLPYMVGPERVLERISEGVKNHKLDGIS
GAIDLTDRHNGTRIVIELKTGFDPAAVLAQLFKHTPLQENFAINNVALVNGRPHTLGLRS
LLDVWIEHRRGVIRRRSEFRRQKALDRLHLVEGLLLALVDIDEVIRVIRSSDDAEAAKNG
LMSRFSLDDIQAQYILDLRLRRLTKMSRIELESERDELQSSITELERILGSAALLDGVVI
DEMDKAVATYGTPRRTVLLDEGDDGRLVPVVAHGDDMPSDAALDAARHAENVLDAADAVA
AARKAGETAEALRIEDEPCVIALSASGLIARMSIDALTIWAKRGAHTEKREPDDVIVSLM
PARTRADYALVTSAGRMVLAHVVELPNLEVTGHLSLTGGIEATELLTSTESTDPVPGERV
IATLALRDTVGQDDTAAQLPPVGLGTRNGIVKRWNRESPTTMDSWSIIDLKDGDELLVAA
DAHDDDRFVFVSSDSSLLTYEARNVRPQGRTAAGMAGIHLADGCTVLSCAVVAHADVEWH
DAEHDDAGNLLSPASGAVVLTVAGDVDALPGTENGAAKVTPLELYPTKGRATGGVRSQRF
LKGQNTLIRACVGSYPLLAATSGGHPVELPAPDMRRDGSGTELPAPIAYAA
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgtcgcaggcaggcagcggccgggtacgacccccggcaggtcgaggagcacatc
gtggagaccccgctcgccgaggagatgagcaaatcgttcctggaatatgcctactcggtg
atctacgcgcgcgcgttgccggatgcacgcgacggcatgaagccggtgcaacgccgcatc
gtgtaccagatgggtcagatgaacctgctgcccacgcgcccgtacatgaagtccgcccgc
gtggtgggcgaggtgatgggcaaattgcacccccatggagattcggcgatctacgaagcc
atggtgcgtctcgcgcagccattcgcgatgcggctgccgttggtcgacggccacggtaat
ttcggttcgttggacgacggtcctgcggcatcgcgatacaccgaggcacgccttgcaccc
gccgcgctcggcatgaacgccgacatcgacgaggacacggtcgatttcgtgccgaattac
gacaacaagctcaaggaaccgaccgtgctgccgtcggcgattcctaacctgctcgtcaac
ggcgcctcgggcattgccgtcggcatggccacgaatatggccacgcataacctcggcgaa
gttgtcgccgcagccaaatacgtgatgaagcatcccgatgccacactcgacgacctcatg
caatacgtgcccggacctgattggccgggcggagggatcatcatagggcgacaaggcatc
cgagatgcctatgagactggccgaggcgtggtcaccacccgttccgccacacatgtggag
aatctcaccgcacgcaagaaggccatcgtagtgacgcagctgccatacatggtgggtccc
gagcgtgtgctcgaacgcatctccgagggtgtgaagaaccataagctcgacggcatctcc
ggtgccatcgacctgacggaccgtcacaatggcacccgcatcgtgatcgagctcaagacg
ggattcgacccggcagccgtgttggcacagctcttcaaacacaccccgttgcaagagaac
ttcgccatcaacaatgtcgccttggtgaatgggcgcccccacacactcggactgcgttcc
ctgctcgatgtatggatcgaacaccggcgtggtgtcatccggcgccgcagtgagttccgc
cgtcagaaggcgttggaccggctgcatctggtcgagggtctattgctcgccttggtggac
atcgacgaggtgatccgcgtgatccgctcaagcgacgatgcggaggcggccaagaacgga
ctcatgagccgattcagccttgacgatattcaggcgcaatacattctcgacctgcgcctg
cgcagactcaccaagatgagccgcatcgaactcgaatccgaacgcgacgaacttcagtcg
tcgatcaccgaattggagcgcatcctcggctcggccgcattactggatggcgtggtgatc
gacgagatggacaaggcggtggcaacctacggcacgccacgacggacggtgctgctcgat
gagggcgacgacggccggctcgtgccagtcgtggcccacggcgatgacatgccttccgac
gccgcactcgatgccgcacgccatgcggagaacgtactcgacgccgccgatgcggtggcg
gcagcccgtaaggccggcgaaaccgccgaggcgctgcggatagaagacgaaccatgcgtg
atcgcattgagcgcctcagggctcatagcccgcatgagcatcgatgccctgaccatttgg
gccaaacgaggcgctcacaccgaaaagcgtgaacccgacgatgtgatcgtctcgctgatg
ccggcacgcacccgtgccgactatgcgttggtcacctccgcgggccgcatggtgctcgcc
catgtggtggagctgccgaatctggaggtcaccggccacctgagcctcacaggaggcatt
gaagccaccgagctgctcacctccaccgaaagcaccgatccggtgcccggcgaacgggtg
atcgccacgctcgcgctacgcgacaccgtcgggcaggacgatacggcggcacagctgccg
ccggtcgggttaggcacacgcaacggcattgtgaagcgctggaaccgtgaatcccccacc
acgatggattcctggagcatcatcgatttgaaggacggggacgagctgcttgtggcggcc
gatgcgcatgacgacgaccgcttcgtgttcgtttcctccgattcctcgctgctcacgtat
gaggccaggaatgtacgtccccagggccgcactgcggcaggcatggccggcatacatctc
gccgatggatgtacggtgctctcctgcgccgtggttgcgcacgccgatgtcgaatggcat
gatgccgagcacgatgacgcaggcaatctgctctctcccgccagtggagccgtggtgctc
actgtcgccggcgatgtggatgcgctgccgggcaccgagaacggtgcggcgaaggtcacg
ccattggagctctaccccaccaagggaagagcgaccggtggtgtgcgctcgcagcgcttc
ctcaaggggcagaacacgttgatcagggcgtgcgtgggttcctacccgctgctggccgca
acgtcggggggccatcccgtcgagctgccggcgccggatatgcgtcgtgatggttcggga
accgagctgcctgcaccgatcgcctacgcggcctaa
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