Bifidobacterium animalis subsp. lactis Bi-07: W91_1379
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Entry
W91_1379 CDS
T02080
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bls
Bifidobacterium animalis subsp. lactis Bi-07
Pathway
bls03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bls00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
W91_1379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bls03021
]
W91_1379
03400 DNA repair and recombination proteins [BR:
bls03400
]
W91_1379
Enzymes [BR:
bls01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
W91_1379
Transcription machinery [BR:
bls03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
W91_1379
DNA repair and recombination proteins [BR:
bls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
W91_1379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
PLC-beta_C
Ac81
Focal_AT
FadA
Motif
Other DBs
NCBI-ProteinID:
AFJ18650
LinkDB
All DBs
Position
complement(1568746..1572783)
Genome browser
AA seq
1345 aa
AA seq
DB search
MLDVNAFDKLKIGLATADDIRGWSYGEVKKPETINYRTLKPEKDGLFGEQIFGPTRDWEC
ACGKYKRVRFKGIVCERCGVEVTRSRVRRERMGHIELAAPVTHIWFFKGVPSRLGYLLGI
APKELEKVIYFASYMVTSVDEEQRHQDLPDLQDEFDHEVQNLERRRNNEIEERAKKLEAD
LAELEADGEVKGSAKTKLRNGAERDMAAIRQRYDDQIKRIAAVFDKFKSLKPGDMESDVD
LWREMEDRYGDYFEGCMGAEAIKKRLQDFDLEAAAKELREEIETGTGQRKARALKRLKVV
NAFLTTDNKPEAMVLDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIE
LGAPEIMLNNEKRMLQEAVDSLFDNGRRGRPVTGASNRPLKSLSDMLKGKQGRFRQNLLG
KRVDYSGRSVIVVGPSLRMHQCGLPKPMALELFKPFVIKRLVDLNYAQNMKSAKRLVDRG
DSEVWGVLEEVISEHPVLLNRAPTLHRLGIQAFEPILVEGKAIHLPPLACAAFNADFDGD
QMAVHLPLSAEAQAEARSLMMASDNILKPADGHTVTMPSQDMILGLYYLSTVIDGAKGQG
RIFSSLEEAQMALDKHEIDMQAKVLIRLPQDFVLPKDWEPGEVQVIDPEPGSPDVVKEER
FADGSVLFATSLGRILFNDTLPVDYPFINEQAPKGKLSKIVDDIATRYSTQQVAATLDAL
KDLGFTRAPWSGVTMAFSDIVAPPDREEIIKGYEAQAAKVNNQYDLGLLTEEERRQELIN
LWTECTDKVAEAMRENFHDDNNVNIMVQSGARGNWMQIRQIAGMRGLVANPKGEIIPRPV
KSNYREGLSVLEYFISQHGARKGLADTALRTAESGYLTRRLVDVSQEIIVREEDCGTTHG
LPMTVAERDENGNLVLVKAADGGPYSRLLAQDVLDPADGKTVLYHAGDALSMDVLNDLVA
HGVEQVIGRSVLTCESKRGVCAKCYGWSLATNKLVDVGEAVGIVAAQSIGEPGTQLTLRS
FHSGGVASASDITQGLPRVTELFEARTPKGEAPISEFAGTIKVQDTERGREVILQPDDDS
LEPITYQVTRRAPMLVKDGQHVDPGTQLVEGSVDPKKILRILGPRAAQMNIVNEVHDVYR
SQGVDIHDKHIEVIVHQMLRRVTVIDSGDTDLLPGELVDRARFREQNKKTVAAGGRPAAG
RPELMGITKASLATDSWLSAASFQETTRVLTEAALNEKEDDLKGLKENVIIGKLIPAGTG
LARYRNATVEPDKAIRDTIYPNFGLGDGSLGGDLSDGDLGDVDFSNIDFGDLKLGDDFNP
DDFLDDNDNPVDFGDEFRIDPDELK
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacgtcaacgcatttgacaaactgaagattggcctggccaccgccgacgacatt
cgcggttggagctatggcgaagtcaagaagccggagaccatcaactaccgtacgctcaag
cccgagaaggacggcctgttcggtgagcagatcttcggaccgacccgcgactgggagtgc
gcctgcggcaagtacaagcgcgtgcgcttcaagggcatcgtgtgcgaacgctgcggtgtc
gaggtcacccgtagccgcgtgcgccgtgagcgcatgggccacatcgagctcgccgccccg
gtgacgcacatctggttcttcaagggtgtgccgagccgcttgggctatctgctcggcatt
gcgccgaaggaactcgagaaggtcatctacttcgcctcctacatggtcacctcggtggat
gaggagcagcgtcatcaggatctgcctgatctgcaagacgagttcgaccacgaggtgcag
aatctcgaacgtcgccgcaacaacgagatcgaggagcgcgccaagaagctcgaagccgac
ctggccgaactcgaagcggacggcgaggtgaagggcagcgccaagacgaagctgcgcaac
ggcgcggaacgcgacatggcggccatccgccagcgttacgacgaccagatcaagcgcatc
gccgcggtgttcgacaagttcaagtccctcaagccgggcgacatggagtccgatgtggac
ctgtggcgtgagatggaggatcgctacggcgattacttcgaaggctgcatgggcgccgag
gcgatcaagaagcgcctgcaggacttcgacctcgaagccgccgccaaggagctgcgcgag
gagatcgagactggcaccggccagcgcaaggcccgtgccctcaagcgcctcaaggtcgtc
aacgccttcctgaccaccgacaacaagccggaggccatggtgctcgacgtgatcccggtg
atcccgccggatctgcgcccgatggtgcagctcgacggtggccgtttcgccacgtccgac
ctgaacgacctctaccgtcgtgtgatcaaccgcaataaccgcctgaagcgcctcatcgaa
ctcggcgccccggagatcatgctcaacaacgagaagcgcatgctccaggaagccgtcgat
tcgctgtttgacaacggccgtcgcggccgcccggtcaccggtgcctcgaaccgcccactc
aagtccctgagcgacatgctcaagggcaagcagggccgcttccgccagaacctgctcggc
aagcgcgtcgactactccggccgttccgtgatcgtggtcggcccgtcgctgcgcatgcac
cagtgcggcctgccgaagccgatggcactcgagctgttcaagccgttcgtgatcaagcgc
ctcgtcgacctgaactatgcgcagaacatgaagagcgccaagcgtctcgtcgaccgcggt
gattccgaggtgtggggcgtgctcgaagaggtcatctccgagcatccggtgctcctcaac
cgtgcacctacgctgcaccgactgggcattcaggccttcgagccgatcttggtcgaaggc
aaggcgatccaccttccgccgttggcctgcgccgcattcaacgccgacttcgacggcgac
cagatggcagtccatctgccgctgtccgccgaagcccaggccgaagcccgttcgctcatg
atggcttccgataacattctgaagcccgccgacggccacaccgtgaccatgccttcgcag
gacatgatcctcggcctgtactacctgtcgaccgtcatcgacggcgccaagggccagggc
cgcatcttctcgtcgctcgaagaggcgcagatggccctcgacaagcatgagatcgacatg
caggccaaggtgctcatccgcctgccgcaggacttcgtgctgccgaaggattgggagccg
ggcgaggtccaggtcatcgacccggagccgggcagcccggacgtggtgaaggaggagcgt
ttcgcagacggttccgtgctgttcgccacctccctcggccgcatcctgttcaacgacacg
ctgccggtggactacccgttcatcaacgagcaggcgccgaagggcaagctctcgaagatc
gtcgacgacatcgcgacccgttactccacccagcaggtggctgctaccctcgacgcattg
aaggatctcggcttcacccgcgcaccgtggtcgggcgtcacgatggcgttctccgacatc
gtggccccgccggaccgcgaggagatcatcaagggctatgaggcacaggccgccaaggtg
aacaaccagtatgatctgggcctgctcaccgaggaggagcgccgtcaggagctcatcaac
ctgtggaccgagtgcaccgacaaggtcgccgaagccatgcgcgagaacttccatgacgac
aacaacgtgaacatcatggtgcagtccggtgcacgaggcaactggatgcagattcgccag
atcgccggcatgcgtggtctcgtggcgaacccgaagggcgagatcatcccgcgtcctgtg
aagtcgaactaccgcgagggcctgtcggtgctcgagtacttcatctcgcagcacggcgcc
cgcaagggtctggccgatacggcactgcgtaccgccgagtcgggctacctcacccgtcgt
ctcgtggacgtctcccaggagatcatcgtgcgcgaagaggactgcggcaccacgcacggt
ctgcccatgaccgttgccgagcgtgacgagaacggcaatctcgtgctcgtcaaggcggcg
gacggcggcccgtactcgcgtctgctcgctcaggacgtgctcgacccagccgacggcaag
accgttctgtaccacgcgggcgacgccctctcgatggacgtgctcaacgacctcgtggca
catggtgtggagcaggtgatcggccgctccgtgctcacctgcgaatccaagcgcggcgtg
tgcgcgaagtgctatggctggtcgctggccaccaacaagctcgtcgacgtcggcgaggcg
gtcggcatcgtcgcggcacagtccatcggcgagcctggcacgcagctgacgcttcgttcc
ttccactccggtggcgtcgcctcggcatccgatatcacgcagggtcttcctcgtgtcacc
gagttgttcgaagcccgtacgcctaagggtgaggcgccgatctcggagtttgccggcacc
atcaaggtgcaggacaccgagcgtggccgtgaggtcattctgcagccggacgacgactcg
ctcgagcccatcacctatcaggtgacccgtcgcgcgccgatgctcgtcaaggacggccag
cacgtcgatccgggcacccagctggtcgagggttccgtggatccgaagaagattctgcgc
attctcggaccgcgtgccgcccagatgaacatcgtgaacgaggtgcacgacgtgtaccgt
tcgcagggcgtcgacattcacgacaagcacatcgaggtcatcgtgcaccagatgctgcgt
cgcgtcaccgtgatcgattccggtgacaccgacctgctgccgggtgagctcgttgaccgc
gcacgcttccgcgagcagaacaagaagaccgtcgccgccggtggccgcccagcagcgggc
cgcccggagctcatgggcatcaccaaggcttcgctggcgaccgactcctggctgtccgcc
gcatcgttccaggaaacgactcgagtgctcaccgaggccgccctgaacgagaaggaagac
gacctgaagggcctcaaggagaacgtgatcatcggcaagctcatcccggccggcaccggt
ctggcgcgctaccgcaacgcgaccgtggagcccgacaaggcgatccgcgacaccatctac
ccgaacttcggcctgggcgacggttcgctcggtggtgacctcagcgatggtgatctgggt
gacgtcgacttctcgaacatcgatttcggtgatctgaagctcggcgacgacttcaacccg
gacgacttcctcgacgacaacgacaacccggtcgacttcggagacgagttccgcatcgac
ccggacgaactcaagtag
DBGET
integrated database retrieval system
