Blattabacterium sp. (Nauphoeta cinerea): K645_856
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Entry
K645_856 CDS
T02863
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
blu
Blattabacterium sp. (Nauphoeta cinerea)
Pathway
blu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
blu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K645_856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blu03021
]
K645_856
03400 DNA repair and recombination proteins [BR:
blu03400
]
K645_856
Enzymes [BR:
blu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K645_856
Transcription machinery [BR:
blu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K645_856
DNA repair and recombination proteins [BR:
blu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K645_856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
CheR
Motif
Other DBs
NCBI-GeneID:
17130496
NCBI-ProteinID:
AGW85950
UniProt:
U3QCT4
LinkDB
All DBs
Position
184065..188207
Genome browser
AA seq
1380 aa
AA seq
DB search
MLKPETINYRTHKPERDGLFCERIFGPVKDYECACGKYKRIRYKGIVCDRCGVEVTEKKV
RRERMGHISLVVPVVHIWCFRSSPNKIGYLLGLPSKKLEMIIYYERYVVIQGGLGLRFDG
SSFHKGDFLTEEEYLQTLNKLPKGNQQLEDSDPNKFIAKMGAECIEDLLNRTDLDLLSME
LRNQVQNETSKQRRAEALKRLQVIESFKEGKKMEEIHLGMIIHVLAVIPPELRPLVPLDG
GRYAASDMTDLYRRVLIRNNRLKRLIEIKAPEVILRNEKRMLQEAVDSLFDNSRKVSAVK
SEANRPLKSLSDALKGKQGRFRQNLLGKRVDYSARSVIVVGPHLKLHECGLPKDMAAELY
KPFIIRKLIERGIVKTVKSSKKIIDKRDPMIWDILENVLKGHPVLLNRAPTLHRLGIQAF
QPKLIEGKAIQLHPLVCAAFNADFDGDQMAVHLPLSHGAILEAQLLMLASQNILNPANGS
PITVPSQDMVLGLYYMTKPLLSNSKIKVKGEGLIFYSSEEVEIAYNQGVVDLHALIKVKV
NLRDKEGFVSRIIETTVGRVLFNQVVPKKVGFINESLTKKSLREIIGKILHFTDVPTTAN
FLDDIKELGFYNAFKGGLSFGLGDIIIPDNKKDMVYHAIKQVDNVKINYNMGLITNNERY
NQVIDIWTNTNAMLTEKVMKYMREDRQGFNPVYMMLDSGARGSKEQIRQLSGMRGLMAKP
QKTGSSGGEIIENPILSNFREGLSILEYFISTHGARKGLADTALKTADAGYLTRRLVDAA
QDVIIKIENCKTLRGLEISALKKNEEIVETLFDRILGRISLNDIYDKENQLIISSGEMID
EKIAEIIDKSGIEIVEVRSPLTCEAKMGICSKCYGRNLSTGEIVKKGEAVGVIAAQSIGE
PGTQLTLRTFHVGGTAGNITESSQIKAKYNGIIEFEDLKIVQTKQNSDQVGIVVSRSTEM
KLFDSKKSSVLMVNNIPYGAYLYVKHGDQLKTGDTICKWDLYNAVIIAEFSGIIYYQHLE
QGVTFQIEIDEQTGFQEKVITEVRNKNLIPTLKIINEKNEELKVYNLPVGAHLMVEDGEK
IDIGKILVKVPRRTAKSGDITGGLPRLSELFEARNPSNPAVVSEMDGIVSHGKIKRGNRE
ILVESKTGEIRKYLVKLSNQILVQENDYVKAGMPLSDGAVTPNDILNIRGPRAVQEYLIK
EIQEVYRLQGVKINDKHFEVIVLQMMRKVEVIDVGDTKFLEGNIEYKDDFIEENDRISQM
KVVENSGDSDIFKKGDIINYRDFRNENAVLKYKNKKLIKTRNAIPATARPILQGITRAAL
QTKSFISAASFQETTKVLSEAAISSKIDYLHGLKENVIVGHKIPAGTGLKEYEDLYPDII
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
gtgttaaaaccagaaacaatcaattatcgtactcataaaccggaaagagatggactcttt
tgtgaacgaatttttggtccagtaaaagattatgaatgtgcttgtggcaaatacaaaaga
attcgttataaaggaattgtttgtgatagatgtggagttgaagttactgaaaaaaaagtg
agaagagaacgtatgggacatataagccttgtagttcctgttgttcatatctggtgtttt
aggtcttcacccaataaaattgggtatttactgggtttaccgtcaaaaaaacttgaaatg
attatttattatgaacgatatgttgttattcaaggaggattagggttacgttttgatgga
tcttcttttcataaaggagattttcttactgaagaagaatatttgcaaactttaaataag
cttccaaaaggaaatcaacaactagaagattctgatccaaataaatttatcgctaaaatg
ggggcagaatgcatagaggatcttttaaatagaacagatttggatctgttatctatggaa
ttaagaaatcaagttcagaatgaaacttctaaacaaagacgtgctgaagcattaaaacgt
ttacaggtcattgaatcttttaaagaaggaaaaaaaatggaggagatccatcttgggatg
attattcatgtgttagctgttattcctccagaattacgtcctttagttcctttagatgga
ggacgttatgccgcatctgatatgactgatttatatcgtcgtgtccttataagaaataat
cgtttaaaaaggcttatagaaattaaagcacctgaagtcattttacgaaatgaaaaaaga
atgcttcaagaagcagtagattctctttttgataattcaagaaaagtttctgccgtaaaa
tcagaagcaaatcgtcctttaaaatctttatctgatgcattaaaaggaaaacaaggtcgt
tttagacaaaatcttcttggaaagagagtcgattattccgcacgatctgttattgtagta
ggtccacatttaaaattacatgaatgtggattacctaaagatatggctgcagaactttat
aaaccttttattatacgaaaattaattgagagagggatagtaaaaacagtaaaatcttct
aagaaaattattgataaaagagatcccatgatatgggatattttagaaaatgttttaaaa
ggacatcctgtattattaaatagggcacctacattacatagattaggaattcaagctttc
caacctaaattgatagaagggaaagcaattcaattacatcctttggtttgtgctgctttt
aatgcagattttgatggagatcaaatggctgttcatttaccattatctcatggtgctata
ttagaagctcaacttttgatgttagcttctcaaaatatattaaatcctgctaacggatct
cctattacagttccttctcaagatatggtattaggattatattatatgactaaaccttta
ttatcaaattcaaaaataaaagtaaaaggagaaggacttattttttattcctcagaagaa
gttgaaatagcatataatcaaggcgtagtagacttacatgctttaattaaagtaaaagtt
aatcttcgtgataaagaagggtttgttagtagaataatagaaactactgtaggtagagta
ttatttaatcaagtagtacctaaaaaagtagggtttattaatgaatctctcacaaaaaaa
tccctaagagaaattatagggaaaatattacattttacagatgtccctactactgctaat
tttttagatgatattaaagaattaggattttataacgcatttaaaggtggtttatctttt
ggattaggcgatattattatacctgataataaaaaagatatggtttatcatgcaataaaa
caagtagataatgtaaagatcaattataacatgggattgattacgaataatgaacgttat
aatcaagtaattgatatatggacaaatactaacgctatgcttacagaaaaagtaatgaaa
tatatgcgtgaagatagacaaggatttaatccagtatatatgatgttagattctggagct
agaggttctaaagaacaaatacgtcagctttcagggatgcgtggtttaatggccaaacct
caaaaaactggatcttctggaggcgaaattattgaaaatcctattttatcgaactttaga
gaaggactttctattttagaatattttatatctacccatggagctagaaaaggattagca
gatactgcattaaaaactgcagatgctggatatcttacaagacgtttagtagatgccgct
caagatgtaattattaaaatagaaaattgcaaaactttgcgtggactagaaatttctgca
ttaaaaaaaaatgaggaaattgtagaaactttatttgatagaattttaggacgtatatct
ttaaatgatatttatgataaagagaatcaattgataatttcttcaggggagatgattgat
gagaaaatagcagaaattattgataagtctggaattgaaatagtagaagtgagatctcct
ctaacttgtgaagctaaaatgggaatttgttctaaatgttacggtcgtaatttatcaaca
ggagaaattgttaaaaaaggagaagcagtaggggttattgctgcacaatcaattggagaa
ccaggcactcagctgactttacggacttttcatgttggaggaacagcaggaaatattacg
gaatcttcacaaataaaagcaaaatataatggaattatagaatttgaagatttaaaaatt
gttcaaacaaaacagaattctgatcaagtgggaatcgtcgtttctaggtctacagaaatg
aaactttttgattccaaaaaatcatccgttttaatggtaaataatattccttatggggcc
tatttatatgtaaaacatggagatcagttgaaaacgggagatactatttgtaaatgggat
ttatataatgcagttattattgcagaattttctggaataatatattatcaacatttagaa
caaggtgtgacgtttcaaatagaaatagatgaacaaactggatttcaagaaaaagtaata
acagaagttagaaataaaaatttaataccaacattaaaaattattaatgaaaaaaatgaa
gaattaaaagtatataatcttccggttggtgctcatttaatggtagaagatggagaaaaa
atagatataggaaaaatattagtaaaagtaccaagaagaacagcgaaatcaggagatatt
acaggtggattgcctcgtttatctgaattatttgaagcacgtaatccttctaatccagct
gtggtttcagaaatggatggaatagttagtcatggaaaaataaaaagaggaaatagagag
attctcgtagaatccaaaacaggagaaatcagaaaatatcttgtcaaactatctaatcaa
atacttgtgcaagaaaatgattatgtcaaagcaggtatgcctttgtcagatggagcagta
actcctaatgacattttaaatataagaggacctagggctgtgcaagaatatttaataaaa
gaaatacaagaagtatatcgtttacaaggcgtaaaaattaatgataaacattttgaagtt
attgtattacaaatgatgagaaaggtagaagtgatagatgtgggagatacaaaatttttg
gaagggaatatagaatataaagatgattttatagaagaaaatgatagaatatctcagatg
aaagtagttgagaattctggagattctgatatttttaaaaagggagatattattaattac
agagattttagaaacgaaaatgcagttctaaaatataaaaataaaaaattaatcaaaacc
agaaatgcaattcctgctacagcaagacccatattacaaggaataacgagagctgcgtta
caaactaaatcttttatatctgcagcttcatttcaagaaacaacaaaagttctaagtgaa
gcagctataagtagtaagattgattatttacacggattgaaagaaaatgtaattgtggga
cacaaaatccctgcaggaactggattaaaagaatatgaagatctttatccagatataata
taa
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