Bradyrhizobium lupini: AB3L03_06600
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Entry
AB3L03_06600 CDS
T11005
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
blup Bradyrhizobium lupini
Pathway
blup03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
blup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AB3L03_06600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blup03400
]
AB3L03_06600
Enzymes [BR:
blup01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AB3L03_06600
DNA repair and recombination proteins [BR:
blup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AB3L03_06600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
XDI32681
LinkDB
All DBs
Position
1315533..1316975
Genome browser
AA seq
480 aa
AA seq
DB search
MQYITLENETDFDGWRKAARSLVLHQMKPVDVTWTVQGGEAELFAPPSPSPLPAGGDSTF
NVPAKFVELAKAAILHRDPERFAILYRLLFRLNDNHDLIEVATDLDVAQVTAMAKAVYRD
EHKMHAFVRFREIGREREAHYVAWFEPEHHIVELAAPFFAKRFADMPWSILTPDLCAHWD
GHALSFTSGVGKSEAPNEDRLEETWRRYYASIFNPARLKVKAMQTEMPKKYWRNLPEASI
IKPLIEDAERMTGAMIANAPTDPHKPQKRPEAPMKRKTAADDLEALREEAAHCRACHLYK
DATQTVFGEGPKSANIMLVGEQPGDKEDLAGHPFVGPAGQMLDKALQEAGVDRKKVYVTN
AVKHFKFVPRGKIRLHQKPNTPEIKACRQWYEREVSVIQPDLIVAMGATAAQSVFGKITP
IGKNRGRLIDLPDGHKALVTVHPSYLLRLPDPEAKVLEYRRFVEDLKIVAGLQKKAARAA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacatcaccctcgagaacgaaaccgatttcgacggctggcgcaaagccgcgcgt
agcctcgtgcttcaccaaatgaaaccggtcgatgtcacctggaccgtgcagggcggcgaa
gcggagctgttcgcgccaccctcgccgtctccgctgccggccggtggcgatagcaccttc
aacgtgccagcaaaattcgtcgagctcgccaaggccgcgatcctgcatcgcgatcccgag
cgtttcgcgatcctctatcgcctgctgtttcggctgaacgacaatcacgacctcatcgag
gtcgcgaccgatctcgatgtcgcgcaagtcacggccatggcaaaggcggtctaccgcgac
gagcacaagatgcatgccttcgtgcgcttccgcgagatcggcagggaacgcgaagcacac
tacgtcgcctggttcgagccggagcatcatatcgtcgagctcgccgcgccgttcttcgcc
aagcgcttcgccgatatgccctggtcgatcctgacgccggatttgtgcgcgcattgggat
ggccacgcgctctcgttcacgtccggcgtcggcaagagcgaggcgccgaacgaagaccgg
ctggaggaaacctggcggcgctactatgccagcatcttcaatccggcccgcctgaaggtg
aaggcaatgcagaccgagatgccgaagaaatattggaggaacctgcccgaggcttcgatc
attaagcccctgattgaggacgccgagcgcatgaccggcgccatgatcgccaatgcccca
accgatccgcacaagcctcaaaagcggccggaggctccgatgaaacgcaagaccgctgcc
gacgatctcgaagcgctccgcgaggaggccgcccactgccgcgcctgccatctctacaag
gacgccacccagaccgtgttcggcgagggtccgaagtccgccaatatcatgctggtcggc
gaacaacctggcgacaaggaagacctcgccggccatcccttcgtcggtccagccggccag
atgctcgacaaggcgctgcaggaggccggcgtcgaccgcaagaaggtctatgtcaccaac
gcggtgaaacacttcaaattcgtgccgcgcggcaagattcgcctgcatcagaagccgaat
acgccggagataaaggcctgccggcagtggtatgagcgggaggtctccgtcatccagccc
gatctcatcgtcgcgatgggcgcgaccgccgcgcagagcgtgttcggcaagatcaccccg
atcggaaagaaccgcggccggctcatcgacctgcccgacggtcacaaggcgctggtgacg
gtgcacccgtcctatctgctgcggctgcccgatccggaagccaaggtgctggaatatcgg
cgctttgtcgaagatttgaagatcgtcgccgggttgcagaagaaagccgcgcgcgccgcc
tga
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