Bradyrhizobium lupini: AB3L03_08270
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Entry
AB3L03_08270 CDS
T11005
Name
(GenBank) VCBS domain-containing protein
Organism
blup Bradyrhizobium lupini
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_4
Big_9
Cadherin_5
Motif
Other DBs
NCBI-ProteinID:
XDI34721
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Position
complement(1690130..1696249)
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AA seq
2039 aa
AA seq
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MTITLTGTNDTPVAVADTNSGLEDSTITGSVATNDSDVDDGATLTYAQTSAVAGLTINAD
GSYSFEASNAAYQHLAEGATQVVVANYTVTDEHGASAPSTLTITLTGTNDTPVAVADTNS
GLEDSTITGSVATNDSDVDDGATLTYAQTSAVAGLTINADGSYSFEASNAAYQHLAEGAT
QVVVANYTVTDEHGASAPSTLTITLTGTNDTPVAVADTNSGLEDSTITGSVATNDSDVDD
GATLTYAQTSAVAGLTINADGSYSFEASNAAYQHLAEGATQVVVANYTVTDEHGASAPST
LTITLTGTNDTPVAVADTNSGLEDSTITGSVATNDSDVDDGATLTYAQTSAVAGLTINAD
GSYSFEASNAAYQHLAEGATQVVVANYTVTDEHGASAPSTLTITLTGTNDTPVAVADTNS
GLEDSTITGSVATNDSDVDDGATLTYAQTSAVAGLTINADGSYSFEASNAAYQHLAEGAT
QVVVANYTVTDEHGASAPSTLTITLTGTNDTPVAVADTNSGLEDSTITGSVATNDSDVDD
GATLTYAQTSAVAGLTINADGSYSFEASNAAYQHLAEGATQVVVANYTVTDEHGASAPST
LTITLTGTNDTPVAVADTNSGLEDSTITGSVATNDSDVDDGATLTYAQTSAVAGLTINAD
GSYSFEASNAAYQHLAEGATQVVVANYTVTDEHGASAPSTLTITLTGTNDTPVAVADTNS
GLEDSTITGSVATNDSDVDDGATLTYAQTSAVAGLTINADGSYSFEASNAAYQHLAEGAT
QVVVANYTVTDEHGASAPSTLTITLTGTNDTPVAVADTNSGLEDSTITGSVATNDSDVDD
GATLTYAQTSAVAGLTINADGSYSFEASNAAYQHLAEGATQVVVANYTVTDEHGASAPST
LTITLTGTNDTPVAVADTNSGLEDSTITGSVATNDSDVDDGATLTYAQTSAVAGLTINAD
GSYSFEASNAAYQHLAEGATQVVVANYTVTDEHGASAPSTLTITLTGTNDTPVAVAGHTL
NYTENHAATAIDPALTVSDVDNANLVSATVQITGNYVNGQDVLGFTNQNGITGSFNAATG
MLTLTGSSSVANYQTALDSVTYFNTSDNPSGLARTVTIITNDGAANSVAVTDMINVTPVN
DAPALATTSTLAYTENQAATAINTALTVTDADNPTLTSGTVSITANFVSGQDILAFTNVP
ATMGNIAGSYNGATGVMTLTSAGGTATLAQWQAAERAVTYANSSDNPSTLARTVTYTVDD
GQGVNHASNGLTSTINITAVNDAPALATTSALAYTENQAATAINTALTVTDADNPTLTSG
TVSITANFVSGQDILAFTNVPATMGNIAGSYNGATGVMTLTSAGGTATLAQWQAAERAVT
YANSSDNPSTLARTVTYTVDDGQGVNHASNGLTSTINITAVNDAPVNTVPATSVNAGNGS
GTATFSGASLISISDVDAGSGSVTVSLSLGASAQSLTGILTLATTTGLTFNAGANATKAM
TFTGTITDINNALNGMVFSNGSNNSTRTLTITTNDNGNSGSGGSHTDVDTVSVVKGNGST
PITPAGTAGEAINLALPDQSLDHLVAVTANISGIPSGWILSEGAVNSDGSWTVVTNDIAS
LAITSPSNYTGALVLNVTETWTNTDGSTGSAIAIDNVEAYAPGSPIFALSGDDNLTGSSG
HDMFVFSQPIGHDVIYSFDATSDRIDLIGYANFTGFGDIQAHMANDAAGNAVITLADGQS
ITLNGVDASSLTASDFIFDQTPVTENAGHMVISDGAILPLSGVIDNTGTMELNSTGDETD
LQLIEHGITLQGGGHVDLSDSSENVITGTVSDVTLTNVDNTISGAGHLGDGVMVLVNEGT
IIATGTNALDIDTGSNAVTNTGTLEATGTGGLEVHSDLINTGVLWANGGNVTIDGNVSGN
GTAQISGSATLEFGAASSANVALDAQATGTIVLHDSFDFSGVVSGFNGDDHLDLLDVAFG
AGTTASYVANQAGTGGTLSVTDGVHTANITLLGQYDPAGFQTEADKNTGTLISYHDHLA
NT seq
6120 nt
NT seq
+upstream
nt +downstream
nt
ctgacgatcacgctgaccggcaccaacgacacgccggttgcggttgccgacaccaacagc
ggtctggaagacagcaccatcacgggctctgtggcgaccaacgacagcgacgtggatgac
ggcgcgacgctgacctatgcgcagaccagcgcggtcgccggcctgacgatcaacgcggac
ggcagctacagcttcgaggcgtcgaatgcggcctaccagcacctggccgagggcgcgacg
caggtcgtggttgcgaattacacggtcaccgacgagcatggcgccagcgccccctcgacg
ctgacgatcacgctgaccggcaccaacgacacgccggttgcggttgccgacaccaacagc
ggtctggaagacagcaccatcacgggctctgtggcgaccaacgacagcgacgtggatgac
ggcgcgacgctgacctatgcgcagaccagcgcggtcgccggcctgacgatcaacgcggac
ggcagctacagcttcgaggcgtcgaatgcggcctaccagcacctggccgagggcgcgacg
caggtcgtggttgcgaattacacggtcaccgacgagcatggcgccagcgccccctcgacg
ctgacgatcacgctgaccggcaccaacgacacgccggttgcggttgccgacaccaacagc
ggtctggaagacagcaccatcacgggctctgtggcgaccaacgacagcgacgtggatgac
ggcgcgacgctgacctatgcgcagaccagcgcggtcgccggcctgacgatcaacgcggac
ggcagctacagcttcgaggcgtcgaatgcggcctaccagcacctggccgagggcgcgacg
caggtcgtggttgcgaattacacggtcaccgacgagcatggcgccagcgccccctcgacg
ctgacgatcacgctgaccggcaccaacgacacgccggttgcggttgccgacaccaacagc
ggtctggaagacagcaccatcacgggctctgtggcgaccaacgacagcgacgtggatgac
ggcgcgacgctgacctatgcgcagaccagcgcggtcgccggcctgacgatcaacgcggac
ggcagctacagcttcgaggcgtcgaatgcggcctaccagcacctggccgagggcgcgacg
caggtcgtggttgcgaattacacggtcaccgacgagcatggcgccagcgccccctcgacg
ctgacgatcacgctgaccggcaccaacgacacgccggttgcggttgccgacaccaacagc
ggtctggaagacagcaccatcacgggctctgtggcgaccaacgacagcgacgtggatgac
ggcgcgacgctgacctatgcgcagaccagcgcggtcgccggcctgacgatcaacgcggac
ggcagctacagcttcgaggcgtcgaatgcggcctaccagcacctggccgagggcgcgacg
caggtcgtggttgcgaattacacggtcaccgacgagcatggcgccagcgccccctcgacg
ctgacgatcacgctgaccggcaccaacgacacgccggttgcggttgccgacaccaacagc
ggtctggaagacagcaccatcacgggctctgtggcgaccaacgacagcgacgtggatgac
ggcgcgacgctgacctatgcgcagaccagcgcggtcgccggcctgacgatcaacgcggac
ggcagctacagcttcgaggcgtcgaatgcggcctaccagcacctggccgagggcgcgacg
caggtcgtggttgcgaattacacggtcaccgacgagcatggcgccagcgccccctcgacg
ctgacgatcacgctgaccggcaccaacgacacgccggttgcggttgccgacaccaacagc
ggtctggaagacagcaccatcacgggctctgtggcgaccaacgacagcgacgtggatgac
ggcgcgacgctgacctatgcgcagaccagcgcggtcgccggcctgacgatcaacgcggac
ggcagctacagcttcgaggcgtcgaatgcggcctaccagcacctggccgagggcgcgacg
caggtcgtggttgcgaattacacggtcaccgacgagcatggcgccagcgccccctcgacg
ctgacgatcacgctgaccggcaccaacgacacgccggttgcggttgccgacaccaacagc
ggtctggaagacagcaccatcacgggctctgtggcgaccaacgacagcgacgtggatgac
ggcgcgacgctgacctatgcgcagaccagcgcggtcgccggcctgacgatcaacgcggac
ggcagctacagcttcgaggcgtcgaatgcggcctaccagcacctggccgagggcgcgacg
caggtcgtggttgcgaattacacggtcaccgacgagcatggcgccagcgccccctcgacg
ctgacgatcacgctgaccggcaccaacgacacgccggttgcggttgccgacaccaacagc
ggtctggaagacagcaccatcacgggctctgtggcgaccaacgacagcgacgtggatgac
ggcgcgacgctgacctatgcgcagaccagcgcggtcgccggcctgacgatcaacgcggac
ggcagctacagcttcgaggcgtcgaatgcggcctaccagcacctggccgagggcgcgacg
caggtcgtggttgcgaattacacggtcaccgacgagcatggcgccagcgccccctcgacg
ctgacgatcacgctgaccggcaccaacgacacgccggttgcggttgccgacaccaacagc
ggtctggaagacagcaccatcacgggctctgtggcgaccaacgacagcgacgtggatgac
ggcgcgacgctgacctatgcgcagaccagcgcggtcgccggcctgacgatcaacgcggac
ggcagctacagcttcgaggcgtcgaatgcggcctaccagcacctggccgagggcgcgacg
caggtcgtggttgcgaattacacggtcaccgacgagcatggcgccagcgccccctcgacg
ctgacgatcacgctgaccggcaccaacgacacgccggttgcggttgccggtcatacgctc
aactacacggaaaaccacgccgccaccgcgatcgacccggcgctgacggtgtcagacgtc
gacaacgccaatctcgtctcggcgacggtgcagatcaccggcaattacgtcaatggccag
gatgtgctgggctttaccaaccagaacggcatcaccggatcgttcaacgcggcgaccggg
atgctcactttgaccgggtcatccagcgtcgcgaactaccagaccgcgctggactcggta
acctacttcaacaccagtgataacccgtcgggcctggcgcgcactgtcaccatcatcacc
aatgacggggccgccaacagcgtggccgtgacagacatgatcaatgtgacgccggtgaac
gacgcaccggcgctggcgacgaccagcacgctggcctacaccgagaaccaggctgcgacg
gcgatcaacacggcgctgacggtcaccgacgcggacaacccgacgctcaccagcggcacg
gtatcgatcacggcaaacttcgtctcggggcaggacattctggcctttaccaatgtcccc
gcaaccatgggcaacatcgccggctcctacaacggcgctaccggggtcatgaccctaact
tcggccggcggcacggcaacgctggcgcagtggcaggcggcggagcgtgcggtgacctat
gccaacagcagcgacaatccgtcgacgctggcgcgtaccgtgacctatacggtggacgac
ggccagggcgtcaatcacgccagcaacgggctgacgagcaccatcaacatcacggcagtg
aacgacgcaccggcgctagcgacgaccagcgcgctggcctacaccgagaaccaggctgcg
acggcgatcaacacggcgctgacggtcaccgacgcggacaacccgacgctcaccagcggc
acggtatcgatcacggcaaacttcgtctcggggcaggacattctggcctttaccaatgtc
cccgcaaccatgggcaacatcgccggctcctacaacggcgctaccggggtcatgacccta
acttcggccggcggcacggcaacgctggcgcagtggcaggcggcggagcgtgcggtgacc
tatgccaacagcagcgacaatccgtcgacgctggcgcgtaccgtgacctatacggtggac
gacggccagggcgtcaatcacgccagcaacgggctgacgagcaccatcaacatcacggcg
gtgaacgacgcaccggtgaacactgttcctgctacttcggtgaatgcgggcaatggatcg
ggcacggcgactttttcgggagcaagcctcatcagcattagtgatgtggacgccggaagc
ggcagcgttaccgtgtcactatcccttggcgcttcggcccaatctctaaccggtattctt
acacttgctacgactaccggcctcacattcaacgccggagccaatgctacaaaggccatg
acgttcacgggcacaatcaccgatatcaataacgccctgaatggcatggtattcagtaac
ggttcaaataatagtacccgaacactgacgattacaaccaacgacaacggaaattccggc
tcaggcggaagccataccgatgttgacaccgtctcggtcgtaaagggaaatgggtctacc
cccattacgccggccggcactgccggagaggcgatcaacttagctcttccggatcagtcg
ttagatcacttggttgccgtcacggctaacatttccggtattccctctggatggatattg
agcgagggagccgttaacagcgacggtagctggaccgtggtgaccaatgacatcgcatcg
ctcgcaattacctcaccctcgaattatacgggtgcattggtgctcaacgtgacggagacc
tggaccaatactgacggtagcaccgggtccgcaattgccatcgataacgtcgaagcctat
gcgccgggatcgccgatcttcgcgctctcaggggacgacaacctgactggctcgagcggc
cacgacatgtttgtgttctcgcagccgatcggtcatgacgtgatctatagcttcgacgcg
acctcggatcggatcgatctgatcggctatgccaacttcaccggctttggcgacatccag
gcgcacatggccaacgatgctgccggcaatgcggtgatcacgctcgccgatggccagtcg
atcacgctaaatggggtcgacgcctcatcgctcacggcaagcgacttcatcttcgatcaa
acgccggtcactgaaaacgccggccacatggtgatcagcgacggcgcgatcctaccgctc
tccggtgtcatcgacaacaccggcacgatggagttgaactcgacaggcgacgagacagac
cttcagctgatcgagcatggcatcacactgcagggcggcggccatgtcgacctttcggac
agcagcgagaacgtgatcaccggaacggtctcggacgtcacgctgacgaacgtggacaac
acgatctccggcgccggccatctcggagatggggtgatggtgctggtcaacgaaggcacg
atcatcgccaccggcaccaatgcactcgacatcgataccggatctaacgccgtgaccaac
accggaacgctcgaggcaacaggaaccggtggactggaagtccacagcgacctcatcaac
accggcgtgttgtgggccaatggcggcaacgtcacaatcgatggcaatgtcagcggtaac
ggaacggctcagattagcggttcggccacactcgaattcggagcggcttcatctgcgaat
gtagcgcttgatgcccaagcgaccgggacaatcgtgctccatgactccttcgactttagc
ggggtcgtgtccggatttaacggggatgaccacctggatctcctcgatgtggcattcggg
gccggcacgaccgcgagctatgtcgcaaaccaggccggtacgggaggaaccctgtcggtg
accgacggagtccataccgccaatattaccctgttgggccagtacgaccccgcgggcttc
caaaccgaggcagacaagaacacgggaacgctcatcagctaccacgaccatctggcctga
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