Bradyrhizobium lupini: AB3L03_08685
Help
Entry
AB3L03_08685 CDS
T11005
Name
(GenBank) HAMP domain-containing protein
Organism
blup Bradyrhizobium lupini
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
GAF
OKR_DC_1_N
OmpH
RNase_Y_N
YscO-like
FBF1
IFT57
ATG14
FUT8_N_cat
Motif
Other DBs
NCBI-ProteinID:
XDI33044
LinkDB
All DBs
Position
1775695..1781982
Genome browser
AA seq
2095 aa
AA seq
DB search
MSDLDPGSASRSGRRVPKPKTNGMSEPDSRAELLLALQAMRNGDFSVRMSGDYLGIDGKL
ADTFNDIIAANQRMAQQLELVGQVVGREGKTRQRVKFGLASGSWADMEGSVNTLIDDLLW
PTREVTRAVAAVAQGDLLQTVKLDVDGRPLRGEFLQSATIVNTMIKQLGVFTSEVTRVAR
EVGTEGKLGGQAQVPEVTGVWKDLTESVNSMANNLTNQVRNIAEVTIAVANGDLSKKITV
DVRGEILQLKEAINTMVDQLRSFASEVTRVAREVGTDGKLGGQAIVPGVAGTWKDLTDSV
NAMCGNLTAQVRNIANVTTAVARGDLSRKITVDVRGEILELKDTINTMVDQLNSFASEVT
RVAREVGTEGKLGGQAQVPGVAGTWKDLTDNVNFMASNLTAQVRNIADVATAIASGDLSK
KITVNVSGEILQLKETLNTMVDQLNAFAGEVTRVAREVGTEGRLGGQANVLGVAGTWKDL
TESVNSMASNLTAQVRNIAEVTTAVAGGDLSKKITVDVRGEILELKDTINTMVDQLNAFA
GEVTRVAREVGTEGKLGGQAQVRGVAGTWKDLTDSVNSMASNLTGQVRNIAEVATAVAKG
DLSKKITVNVSGEILQLKETLNTMVDQLNAFAGEVTRVAREVGTEGKLGGQAEVPGVAGT
WKDLTDSVNSMAGNLTAQVRNIAEVATAIAGGDLSRKITVDVRGEILQLKDTLNTMVDQL
NRFAGEVTRVAREVGTEGRLGGQANVPGVAGTWKDLTDSVNSMAGNLTAQVRNIAEVTTA
VARGDLSRKITVDVRGEILELKNTINTMVDQLNGFAGEVTRVAREVGTEGKLGGQAEVPG
VAGTWKDLTDNVNFMASNLTAQVRNIAEVATAIAGGDLSKKITVDVRGEILLLKDTLNTM
VEQLRSFAAEVTRVAREVGTEGRLGGQAVVPGVGGTWKDLTDNVNLLAANLTTQVRNIAE
VTTAVARGDLSRKITVDVKGEILELKNTINTMVDQLNAFAGEVTRVAREVGTEGELGGQA
QVPGVAGTWKDLTDTVNFMAANLTEQVRGIVKVVTAVANGDLKQNLTVKSKGEVAALADT
INNMTETLATFADQVTSVAREVGVEGRLGGQADVPGAAGTWKDLTGNVNLLAANLTSQVR
AIAEVATAVTKGDLTRSIQVDARGEVAELKDNINTMITNLRLTTDVNTEQDWLKTNLAKF
TNMLQGQRDLTTVGRLLLTELSPLVNAHTGVIYQVENEENPRLLLLASYAGDGVYPYPRV
LPFGDGLIGQCALDRRPRVIADIPPDVVPINSALLRVAPKNLVVLPVLFEGQVKAVIELA
SLTSFTTSQMTFLEQLTDSIGIVLNSIEATMQTEGLLKQSQQLAGELQTQQRELQQTNDQ
LEQKAQQLAERNVEVERKNQEIEQARRALEEKATELALTSKYKSEFLANMSHELRTPLNS
ILILGQQLTDNPDGNLTGKQVEFARTIHGAGTDLLNLISDILDLSKIESGTVTVDAEEIL
TANLLETVGRPFRHEAENRNLSFKIDVDPNLARSLVTDSKRLQQVLKNLLSNAFKFTAEG
EVRLKVAAAVGGWGTDHPVLNSAPAVIAFEVSDTGIGIPLEKQKLIFEAFQQADAGTSRK
YGGTGLGLAISRELASLLGGEIHLRSLPGKGSCFTLYLPLKYSGPTLAPRATPQQSQPPA
LQPATAEPQRVIEQLPDDRLNLEPGDSILLIVEDDPHYARVLVDLARDKGFKVLVAARGA
EALELAKQYQPRAVSLDVFLPDMLGWTVLSQLKHNPLTRHIPVQIITLDEDRQHALARGA
FSFVNKPTTTEGVSAALTQIKEYARPRRKRLLIVEDNEAEQLSIRELLHHDDIEIVTTGT
GADALSMLRENPCDCVVLDLRLPDMTGFEVLDQIRNDEALSNVPVVVFTGRELSAEEDAE
LHTMARSIVVKGVESPERLLDETALFLHRVITELPIEKQRMLEKLNSSDEDLIGKTALLV
DDDARNIFALSSVLERRGMKVLTATTGNEAVALVESNPEIAIVLMDIMMPQMDGYQTIGV
IRENPTFARLPIIALTAKAMKGDREKCLEAGASDYLAKPVNTDQLLLAIRMWLHR
NT seq
6288 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacctcgatcccggatctgcatcacgttccggtcgtcgcgttccaaagccaaaa
accaacggcatgtcggagcccgattcccgggcagaattgctgctcgccctgcaggccatg
cgcaacggcgatttctccgtgcgcatgagcggcgactatctcggcatcgacggcaagctc
gccgacactttcaacgacatcatcgccgccaatcagcgcatggcgcagcagctcgaactg
gtcggccaggtggtgggccgcgagggcaagacccgccagcgcgtgaagtttgggctggcc
tccggctcctgggccgacatggaaggctcggtcaatacgctgatcgacgatttgctgtgg
ccgacgcgcgaggtgacgcgcgcggtcgcagccgtggcgcagggcgacctgctccagacc
gtcaagctcgacgtcgatggacgccccctgcgcggcgaattcctgcagtcggcgaccatc
gtcaacaccatgatcaagcagctcggcgtgttcacctccgaggtgacgcgcgtggcgcgc
gaggtcggcaccgaaggcaagctcggcggccaggcccaggtgcctgaggtgaccggcgtc
tggaaggatctgaccgagagcgtcaactcgatggcgaacaacctgaccaaccaggttcgc
aacatcgccgaggtgacgatcgcagttgcgaacggcgacctctcgaagaagatcacggtc
gacgtccgcggcgagatccttcagctcaaggaagccatcaacacgatggtggaccagctc
cgctcctttgcgtcggaagtgacgcgcgtggcgcgcgaggtcggcaccgacggcaagctt
ggcggccaagccatcgtgccaggcgtcgccggcacctggaaggatctcaccgacagcgtc
aacgcgatgtgcggcaatctcaccgcacaggtgcgcaacatcgccaacgtcaccaccgcc
gtggcccgcggcgacctgtcgcgcaagatcacggtggacgtgcgcggcgaaatcctggag
ctgaaggacaccatcaacaccatggtggaccagctcaactcgttcgcctcggaagtgacg
cgcgtcgcgcgcgaggtcggcaccgaaggcaagctcggcggccaggcccaggtgccgggc
gtcgccggtacctggaaggacctcaccgacaacgtcaacttcatggcgtcgaacctcacc
gcgcaggtccgcaacatcgccgacgttgccaccgccatcgcgagcggcgacctctccaag
aagatcacggtgaacgtctcgggcgaaatccttcagttgaaggaaacgctcaacacgatg
gtcgaccagctcaacgccttcgccggcgaagtcacgcgcgtcgcgcgcgaggtcggcacc
gagggccggctcggcggccaggccaacgtgctcggcgtcgccggcacctggaaggacttg
accgagagcgtcaactcgatggcctcgaacctcaccgcgcaggtccgtaacatcgccgag
gtgacgaccgcggtcgcgggcggcgatttgtcgaaaaagatcaccgtcgatgtccgcggc
gagatcctcgagctgaaagacaccatcaacaccatggtggaccagctcaacgcctttgcc
ggcgaagtcacgcgcgttgcccgcgaggtcggcaccgaaggcaaactcggcggccaggcc
caggtgcgcggcgtcgccggcacctggaaggatctcaccgacagcgtcaactcgatggcc
tcgaacctgaccggccaggtccgcaacatcgccgaagtcgcgaccgcggtggccaagggc
gatttgtcgaagaagattaccgtcaacgtgtcaggcgaaatccttcagctgaaggaaacg
ctcaacaccatggtggaccagctcaacgccttcgccggcgaagtcacgcgcgtcgcgcgc
gaagtcggcaccgaaggcaagctcggcggccaggccgaagtccccggcgtcgccggcacc
tggaaggacctcaccgacagcgtcaactcgatggcgggcaacctcaccgcccaggtccgc
aacatcgccgaagttgcgaccgcgatcgccggcggcgacttgtcgcgcaagatcaccgtg
gacgtgcgcggcgagatccttcagctcaaggacacgctgaacacgatggtcgaccagctc
aaccgcttcgcgggcgaggtgacgcgcgtggcgcgcgaggtcggcactgaaggtcggctc
ggcggccaggccaacgtgcccggcgtcgccggcacctggaaagacctcaccgacagcgtc
aactcgatggcgggcaacctcaccgcccaggtccgcaatatcgccgaagtcaccactgcc
gtggcgcgcggcgacctctcgcgcaagatcaccgtcgacgtccgtggcgagattttggag
ctgaagaataccatcaacaccatggtggaccagctcaacggctttgccggtgaagtgacg
cgcgtcgcgcgcgaagtcggcaccgaaggcaagctcggcggccaggccgaggtgcccggc
gttgccggcacctggaaggatctcaccgacaacgtcaacttcatggcctcgaacctcacg
gcgcaggtccgcaacatcgccgaggtcgcgaccgcgatcgccggcggcgacctgtcgaag
aagatcacggtggacgtgcgcggcgaaattctgctgctcaaggacaccttgaacaccatg
gtcgagcagctccgctccttcgccgccgaagtgacgcgcgtcgcgcgcgaggtcggcacc
gagggccggctcggcggccaggccgtcgtgcccggcgtcggcggcacctggaaggacctc
accgacaacgtcaacctgctggccgcgaacctcaccacccaggtccgcaacatcgccgaa
gtcaccaccgccgtcgcgcgcggcgacctgtcgcgcaagatcaccgtcgacgtgaagggc
gaaattctcgagctcaagaacaccatcaacaccatggtggaccagctcaatgccttcgcc
ggcgaagtgacgcgcgttgcccgcgaggtcggcaccgaaggcgaactcggcggccaggcc
caggtgcccggcgtcgccggcacctggaaggatctcaccgacacggtcaacttcatggcg
gcgaacctgaccgagcaggtccgcggcatcgtcaaggtggtgaccgcggtcgccaacggc
gatctcaagcagaacctcaccgtgaaatcgaaaggcgaggtcgcggcgctcgctgacacc
atcaacaacatgaccgagacgctcgcgactttcgccgaccaggtgacgtcggtggcgcgc
gaggtcggcgtcgagggcaggctcggtggtcaggccgacgtgcctggcgccgcgggcacc
tggaaggacctcaccggcaacgtcaatttgctggcagccaacctcacctcgcaggtgcgc
gcgatcgcggaagtggcgaccgccgtgaccaagggcgacctgacgcggtcgatccaggtc
gacgcccgcggcgaggtcgcggagctgaaagacaacatcaacacgatgatcacgaacctc
cgtcttacgacggacgtgaacaccgagcaggactggctgaagaccaatctggcgaaattc
accaacatgcttcagggccagcgcgacctcaccaccgtcggtcgcctgctgctgaccgaa
ttgtcgccgctggtgaacgcgcataccggcgtgatctaccaggtcgagaatgaagagaat
ccgcggctcctgctgcttgcctcctatgccggcgacggcgtctatccgtatccgcgcgtg
ctgccattcggcgacggcctgatcggccaatgcgcgctcgaccggcgcccacgcgtgatc
gcggacattccgcccgacgtggtgccgatcaattcggcgctgcttcgcgtcgcgccgaag
aacctcgtggtgctgccggtgctgttcgaaggccaggtcaaggcggtcatcgagctcgcc
tcgctcacctccttcacgacctcgcagatgaccttcctggagcagctcacggactcgatc
ggcatcgtgctcaactcgatcgaggcgacgatgcagaccgaaggtctgctcaagcagtcg
cagcagctcgccggcgagctccagacccagcagcgcgaattgcagcagaccaacgaccag
ctcgaacagaaggcgcagcagctcgccgagcgcaacgtcgaagtcgagcgcaagaaccag
gagatcgagcaggcccgccgcgcactggaggaaaaggcaaccgagctcgcgctgacctcg
aagtacaagtccgaattcctcgccaatatgagccacgagctgcgcacgccgctgaactcg
atcctgatcctgggccagcagctcaccgacaatccggacggcaatcttaccggcaagcag
gtcgaattcgcccgcaccatccatggcgccggcaccgacctgctcaatctcatcagcgac
attctcgatctctccaagatcgagtccggtacggtgacggtcgacgccgaggaaatcctg
accgcgaatctgctcgagacggtcgggcggccgttccgtcacgaggcggagaaccgcaat
ttgtcgttcaagatcgacgtcgatccgaatcttgcgcgcagcctcgtcaccgattccaag
cgcctgcagcaggttttgaagaacctgctctccaacgccttcaagttcaccgccgaaggc
gaggtgcgcctgaaggtcgccgccgcggtcggcggctggggcacggatcatcccgtgctg
aactcggcgccggccgtgatcgcattcgaagtgtccgataccggcatcggcattccgctg
gagaagcagaagctgatcttcgaggcgttccagcaagcggatgccggcaccagccgcaaa
tatggcggtaccggcctcggccttgcgatcagccgtgaactcgcaagcctgctcggcggc
gagatccacctgcgcagcttgccgggcaagggctcgtgcttcacgctttacctgccgctg
aaatattccggcccgacgctcgcgccccgcgcaacgccccaacagagccagccgccggcg
ctgcagcccgcgacagccgaaccgcagcgcgtgatcgagcagcttcccgacgaccgactc
aacctcgaacccggcgatagcatcctcctgatcgtcgaggacgacccgcactacgcgcgc
gtgttggtcgacctcgcccgcgacaagggattcaaggtgctggtcgcggcccgcggcgcg
gaggcgctggagcttgcaaagcagtaccagccgagggctgtctcgctcgacgtattcctg
ccggatatgctcggctggaccgtgttgagccagctcaagcacaatccgctgacccgccac
atccccgtgcagatcatcacgctcgacgaggaccgccagcatgcgctggcgcgcggcgcc
ttctccttcgtcaacaagccgacgacgaccgagggtgtctcggccgcgctgacccagatc
aaggaatatgcgcgaccgcggcgcaagcggctgctcatcgtcgaggacaacgaggccgag
cagctctcgatccgcgagctcctgcatcacgacgacatcgagatcgtgacgaccggcacc
ggtgccgacgcgctctcgatgctgcgtgagaacccctgtgattgcgtcgtgctcgacctg
cgcctgcccgacatgaccggcttcgaggtgctagaccagatccgcaatgacgaggcgctc
tcgaacgttccggtggtcgtcttcaccggccgcgagctgtcggccgaggaagatgcggag
ctccacaccatggcgcggagcatcgtggtcaagggcgtggaatcgccggagcgcctgctc
gacgagaccgcgctgttcctgcaccgcgtgatcacggagttgccgatcgagaagcagcgc
atgctcgagaagctgaacagttccgacgaagacctgatcggcaagaccgccctgctcgtc
gacgacgacgcccgcaatatcttcgcgctgtcgagcgtgctggagcggcgcggcatgaag
gtgctgacggccacgaccggcaacgaggcggtggccctggtcgaatccaacccggagatc
gccatcgtgctgatggacatcatgatgccgcagatggatggctatcagaccatcggcgtc
attcgtgaaaaccccaccttcgcccgtcttccgatcatcgcgttgacggccaaggccatg
aagggcgaccgcgagaaatgcctcgaggccggcgcgtccgactatctcgccaaacccgtc
aacaccgatcaattgctgcttgcaatccgcatgtggctgcaccgctga
DBGET
integrated database retrieval system
