Bradyrhizobium lupini: AB3L03_14505
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Entry
AB3L03_14505 CDS
T11005
Name
(GenBank) VCBS domain-containing protein
Organism
blup Bradyrhizobium lupini
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_4
Motif
Other DBs
NCBI-ProteinID:
XDI34002
LinkDB
All DBs
Position
complement(3049897..3058215)
Genome browser
AA seq
2772 aa
AA seq
DB search
MPDGAFVVPDPNLIFNGDFKRAGLDLVLSHDGHDFVVHDYFRGDKRAAIASPDGAHLTGD
VVNALTGHVQYAQAASGIAAAQVIGHVTKLSGSATAVRNGVSVILNNGDNVEKGDVVSTG
GDSTLGITFIDGTVFGLSSNARMVLNDMVYDPNGSNNSSLLSLVAGTITFVAGETAKHGD
MKVDTPVATMGIRGTAVLSQINFVVPAGGGDPQPQASFQVLVEPNGTTGSYILFDKVTLL
PIATVNQAGQMIQISGGNVSISNALMSPDIQKLITDVFTLKFTDNNSNTKLTQNFTDSIT
QTGNIVFIKTDTGATATATFTHLPEPGSQGTGHNPSTSTRIPGPPVRRSLDLNGNVKTAF
EMIERAGTTGDTTHYDTISGRITFVDQNLADLPTVSIDLGDAPNFVYKNAGQQDVTGALS
ALQKQDIAATQIQLSVAAAAGNNNNGSAVWTYTIPDHVFDFLAAGETLTLTYKVRVNNNF
SVNPETSTIDITITITGTNDKPVITTSVPTIIFEGGTSVPGGPLTSDVPTSGTLSFDDVD
LTDKHTVSVALSSATLPDGTVPPGPLAAFQSAMSVAIAAGADSTGDGTGTINWSLADLPV
YLADFIPKGEVLTLVYTVTLKDAQGATSQQTITVTITGTDAPAVVWIATDKLGAPSGGFW
KDAANWATGTVPTINDDVIVITDQLHGLTPSYPVTIDTAAFAKSITMNDYDTAVGHKAPE
VINKSALTIAGEISLKADSKLTNFTASTISVGGKAEFLDSSVLTNAGYLTLKGGGDFANG
TTITNSGTIELFGGTLKTLAGINNAGGTLKADAGTTLIVDTATISGGTVTIAGKLELDGS
SVLKNGTLNNSGAVNVKGTADFAHETVANTSGGTIKVLANGWLTIDQGSGVANTGNVTVD
ATGKLTVNGATISGTGTVTGNGEIDLTGAAVLSGSILNNNAVFKVSGTGNVLDHETVTNA
STGTIEVLANGALTIDQGSTVANAGNVTVDANGKLTVNGATLNGAGTVTGNGEIDLTGAA
VLSGGILNNNAAFKVSGSGNALDHETITNATTGTIEVLANGALTIDQGSTVANAGNVTVD
ANGKLTVNGATINGAGTVTSNGEIDLTGGAVLSGGILNNNAAFKVSGTGNALDHETITNA
STGTIEVLANGTLTIDQGSTVANAGNVTIDSAGKLTVNGATISGTGTVTGNGEIDLTGAA
VLSGGILNNNAAFKVSGTGNALDHGTITNAGTGTIEVLANGALTIDQGSTVANAGNVTVD
ANGKLTVNGATINGTGTVTGNGEIDLTGAAVLSGGILNNNAAFKVSGTGNALDHETVTNA
STGTIEVLANGALTIDQGSTVANAGNVTVDANGKLTVNGATINGTGTVTGNGEIDLTGAA
VLSGGILNNNAALKVSGTGNALDHETITNASTGTIEVLTNGALTIDQGSTVANAGNVTVD
ANGKLTVNGATISGGTINGLGTIDVTGASKIDQSATLSTTAVTVESGVILTLDDVIVAGT
AIANHGTVKVDAGSKLTLNGASLTGGALTVSGTLNSTGTTAITDANISNNYLIEATLGAL
TLLATTSASSIANGGILRANGAELDINGEAIANTGTLAAINHGTLKLIGMTVTDTGSGSV
SVESGSALDLQGATIDGGTVTIAGTLESTGTSAIDNADITNTGTITVTSGTLTIDPATLH
AITNHNLIQAKGGVLDVSGEDISNTAALEAVNHGTLKLANLTVSNSSAGSITVDGTSKLY
LTDVSINGGSLSNAGNLYSAGVDTVTGSVTNTGIIEVQSGILDLAGGIAGSGKVIVDVGA
TLEFSGATGSIHIVNSGSIVGAGGNAAIHIQQDTTGSVINNSGTIGPPAASSVTSATDAI
IEIGGSLTINNTGHINGNISVASATFNNESGGTWTVAGTSAFGNASSIVNDGVIDLLNGA
SISLGGPGLVNHSHIDSWGTASISGTISNTGSIEVHDGELSLFGLLTGTGSVTVDAGALL
KLEGTVAQTINLAGDGAAVEIDTDTFGGSIAELSANDTIDLSTIKYGLGTSAVYVANSNP
ATGGVLTVTDADGNHISLNLAGADYSNAHFAGSDDGTGHTLITMTDDHAPAFTAGGVLAG
GVSEQADATGDFATSDTSTPATGAIDFTDIDLTDLPSAQITGQDVTSLGADHSTNLTSSL
SLDEIAALKSGLTLLPQAGLNNGIVTWSYSIADGALDFLAKDQTAKVVSTITSTDDYGET
ATTDVTVTITGKNDAPTLAAVTTDPLVDTSIADSFSDVTGMLVGTDADHGETAGLTYAVL
NADSHGTTAGLYGSLTVNANGTYTYVPDAASINALSEGPCSDVFTIQTTDAQGAVGTASF
TVAVTGANDAPVLTDGSIGQLTDTCAADNFSDLTGQVVGTDADSGDTLTYTLLNADHQAV
GEVTGHYGALALNTNGTYTYVPDAASINALPGCLHYSDSFTVQVTDAHGAASTAIYTVDL
TGANDVPTLSALNLGKLTDTAATDTFSNLTGNLAGTDADADETVTLTYSVQNADSCGTAP
GHYGALTVHSDGSYTYVPDAAAINALQEGPFADTFTVQTTDAHGAAGTAILTVDVDGAND
APVMDVNQISLTHDGAQVTVHGISATDSDAAANETFTLVASGSGSNLSPASTSDTLAHIN
SALQTVTYTDASEGAAIQTVTLTVADSHNASKTVSLLFGTAGQDDFIGTGHQDQFVFAAS
SNNDTITNFTPGQDHIDLSAVVTASDFGAWMAQHVAASPTNSADTLVTINASDTILLKGV
AHLQASDFIVHA
NT seq
8319 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgatggcgcattcgtggttcccgacccgaacctgatcttcaacggcgatttcaag
cgcgccggtctcgatctcgtgctgtctcatgatgggcacgatttcgtcgttcacgattat
ttcaggggcgacaagcgcgcggcgatcgcctcgcccgacggcgcgcacctcaccggcgac
gtcgtcaacgcactcaccggccatgtgcaatacgcgcaggccgcctcaggcattgccgcc
gcgcaggtcatcggccacgtcaccaagctctccggcagcgcgaccgcggtccgtaacggc
gtctccgtcatcctgaacaatggcgacaacgtcgagaagggcgacgtggtctcgaccggc
ggcgactcgacgctcggcattacgttcatcgacggcacggtgttcggcctgtcctccaat
gcgcggatggtgctgaacgatatggtctacgaccccaacgggtcgaacaattcctctctg
ctcagtctggtcgcaggcaccatcactttcgttgccggtgagaccgctaagcacggcgac
atgaaggtcgacacgccggtcgccaccatgggcatccgcggtacggcggtgctgagccag
atcaacttcgtcgttcccgctggcggcggcgatccgcagccgcaggcaagcttccaggtg
ctggtcgagccgaacggcacgacgggctcctacatcctgttcgacaaggtcacgctgctg
ccgatcgcgacggtcaaccaggccggccagatgatccagatcagcggcggcaacgtctcg
atctccaatgcgctgatgtcgccggacatccagaagctgatcacggacgtgttcacgctg
aagttcacggacaacaacagcaacaccaagctgacccagaacttcaccgactcgatcacg
cagaccggcaacattgtcttcatcaagacggataccggtgccaccgcgaccgcgaccttc
acgcatctccctgagccgggatcgcaggggaccggccataatccgtcgaccagcacccgc
attcccggcccgcccgttcgtcgaagcctcgatctcaacggcaatgtgaagacggcgttc
gagatgatcgagcgcgcgggcacgaccggcgacacaactcattacgataccatctccggt
cgcatcaccttcgtcgatcaaaacctggccgatctgccaacggtgagcatagacctcggc
gatgcgccgaactttgtctacaagaacgccggccagcaggatgtcaccggcgcgctctct
gcgctccagaagcaggacatcgcggcaacgcagatccagctcagcgtggccgcagccgcc
ggtaacaacaacaacggctcggcggtctggacctacacgattcccgaccacgtcttcgac
ttcctcgcggcgggcgaaacgttgacgctgacctacaaggtccgcgtcaacaataatttc
tcggtcaatcccgaaacgtcgaccatcgacatcaccatcacgatcaccggcaccaacgac
aagccggtgatcaccaccagcgttccgaccatcatcttcgaaggcggcaccagcgtgccg
ggtggcccgctcaccagcgatgttcccacgtcgggcacgctgagcttcgacgacgtcgat
ctcaccgacaagcatacggtgtcggtggcgttgagcagcgcgaccctgcctgacggcacc
gttccgccggggccgcttgcggcgttccagagcgcgatgtcggtcgcgatcgcggcgggc
gccgatagcaccggagacggcaccggcaccatcaactggtcgctggctgacctgccggtc
tatctcgccgacttcatccccaagggtgaggtgctgacgctggtctacaccgtgacgctc
aaggacgcgcaaggcgccacctcgcagcagaccatcaccgtcacgatcaccggcaccgac
gctcccgccgtggtgtggatcgcgaccgacaagctcggcgctccctcgggcggcttctgg
aaggatgcggccaactgggcaaccggcacggtcccgaccatcaatgacgacgtcatcgtc
atcaccgaccagctgcatgggctgacgccgtcctatccggtgacgatcgacacggcagcc
tttgccaagtcgatcacgatgaacgactacgacaccgcggtcggccacaaggcgccggaa
gtcatcaacaagagtgcgttgacgattgcgggcgagatcagcctcaaggccgattcgaag
ctcaccaatttcacggcaagcacgatctcggttggtggcaaggctgagttcctggacagc
agcgtcctcaccaatgccggctacctgacgctcaagggcggcggcgatttcgccaacggc
accacaatcaccaattccggcacgatcgagctgttcggcggcacgctgaagacgctcgcc
ggaattaacaatgccggcggcacgctgaaggccgatgccggcacgacgctgatcgtcgac
accgccaccatcagcggcggcacggtcaccatcgccggcaagctggaactcgacggcagc
agcgtcctcaagaacggcacgctgaacaattcaggggcggtcaacgtcaagggcacggcg
gatttcgcccacgagaccgtcgcaaacacgtccggcggcacgatcaaggtgctggcgaat
ggctggctgacgatcgaccagggctccggcgtcgccaacaccggcaacgtcacggtggac
gccaccggcaagctgacggtcaacggcgccacgatcagcggcaccggcacggtcaccggc
aacggtgagattgatctcaccggcgctgcggtgctgagcggcagcatcctgaacaacaac
gcggtctttaaggtcagcggcaccggcaacgtgctggaccacgagacggtcacgaatgcg
agcaccggcacgatcgaagtgctggcgaacggcgcgctgacgatcgaccagggctcgacg
gtcgcgaatgccggtaacgtcacggtcgatgccaacggcaagctgacagtcaatggcgcc
acgctcaacggtgccgggactgtcaccggcaacggcgagatcgacctgaccggcgctgcc
gtgctgagcggcggcatcctaaacaacaacgcggccttcaaggtcagcggcagcggcaac
gcgctggaccacgaaacgatcacgaatgcgacgaccggcacgatcgaagtgctagcgaac
ggcgcgctgacgatcgaccagggctcgacggttgcgaatgccggcaacgtcacggtcgat
gccaacggcaagctgacggtgaacggcgccacgatcaatggtgccggtacggtcaccagc
aatggcgagatcgatctgaccggcggcgcggttctgagcggcggcatcctgaacaacaat
gcggccttcaaggtcagcggcaccggcaacgcgctcgaccatgagacgatcacgaatgcg
agcaccggcacgatcgaggtgctggcgaacggcacgctgacgatcgaccagggctcgact
gtcgcgaatgccggcaacgtcacgatcgattccgctggcaagctgacagttaacggcgcc
acgatcagcggtaccgggactgtcacgggcaatggcgagatcgatttgaccggcgctgcg
gtgctgagcggcggcatcctgaacaacaacgcggccttcaaggtcagcggcacgggtaac
gcgctagaccatggaacaatcacgaacgcgggcaccggcacgatcgaagtgctggcgaac
ggtgcgctgacgatcgaccagggctcgacggtcgcgaatgccggtaacgtcacggtcgat
gccaacggcaagctgacggtcaacggggcgacgatcaacggcaccggcacggtcaccggc
aatggcgagatcgatttgaccggcgctgcggtgctgagcggtggcatcctgaacaacaac
gcggccttcaaggtcagcggcaccggcaacgcgctggaccacgagacggtcacgaacgcg
agcaccggtacgatcgaagtgctggcgaacggtgcgctgacgatcgaccagggctcgacg
gttgcgaatgccggtaacgtcacggtcgatgccaacggcaagctgacggtcaacggggcg
acgatcaacggcaccggcacggtcaccggcaatggcgagatcgatttgaccggcgctgcg
gtgctgagcggcggcatcctgaacaacaacgcggcgttgaaggtcagcggcaccggcaac
gcgctggaccacgagacgatcacgaatgcgagcaccggcacgatcgaggtgctgacgaat
ggcgcgctgacgatcgaccagggctcgacggtcgcgaatgccggtaacgtcacggtcgat
gccaacggcaagctgacagttaacggcgcgacgatcagcggtggtacgatcaacggtctc
ggcacgatcgatgtcaccggcgccagcaagatcgatcaatcggcgacgctgagcaccact
gccgtgacggtcgagagcggcgtcatcctgacgctggatgacgtgatagttgcgggcacc
gcaatcgccaatcatggcacggtcaaggtcgatgcaggcagcaagctgacattgaacggt
gcgagcctgacaggcggcgcgctcaccgtttcgggcacgctgaattcgaccggcacaact
gcgattaccgacgccaacatctcgaacaactatctgatcgaggcaaccctgggcgcgttg
acgctgctggcgacgacctccgcaagctcgatcgcgaatggcggcatcctcagggccaat
ggcgccgagctcgacatcaacggcgaagccatcgcaaacaccggcacgctggcggcgatc
aatcatgggacactgaagctgatcgggatgacggtgaccgacaccggcagcggtagtgtc
tcggtcgagtccggctcggcactcgatcttcagggcgcgaccatcgacggcggcacggtg
acgattgccggtacgctggaatcgaccggcaccagcgccatcgacaatgccgacattacc
aacaccggcacgatcacggtcaccagcggtacgctgacgattgatcccgccacgcttcac
gccatcaccaatcacaatctcattcaggcgaagggcggcgtgctcgacgtctccggtgag
gatatctccaacactgcggctcttgaggcagtcaaccacggcacgctgaagctggcaaat
ctcaccgttagcaacagcagtgctgggtcgatcacggtcgacggcacctcgaagctctat
ctgaccgacgtttcgatcaacggcggcagcctgagcaatgccggcaatctctacagcgcc
ggcgtcgatacggtcacgggcagcgtcaccaacactggcatcatcgaggtccagagcggc
attctcgaccttgcgggcggcatcgccggttcaggcaaggtaatcgtcgatgttggcgcg
acgctggagttttcgggcgcgaccggttcgatccacatcgtcaattccggctccatcgtg
ggcgccggtggcaatgcggcgatccacatccagcaggatacgaccggttcggtgatcaac
aattccggcaccatcgggccgcccgccgcttcgagcgtgacctccgcgaccgacgcgatc
atcgagatcggtggcagcctcacgatcaacaacaccggccacatcaacggcaatatctcg
gtcgccagcgcgaccttcaataacgagtccggcggcacctggacggtcgccggcacgagc
gccttcggcaatgcgtcgtcgatcgtcaatgacggtgtcatcgatctcctcaacggcgcc
tcgatctccctgggtgggcctggactcgtcaatcacagccacatcgacagctggggcacg
gcgtcgatctcgggcaccatcagcaataccggcagcatcgaggtccatgatggcgagctg
tcgctgttcggcttgctgaccggcacgggctcggtcaccgtcgatgccggtgcgctgctg
aagctcgaaggcacggtcgcgcagacgatcaacctcgcgggcgacggcgccgcggttgag
atcgatacggatacgttcggcggatcgatcgcggagctgtcggcgaacgacacgatcgac
ctgtcgacgatcaaatacgggctcggcaccagcgcggtctatgttgcaaactccaatccc
gcgaccggcggcgtgctgacggtgaccgatgcggacggcaatcacatcagcctgaacctg
gccggcgccgactacagcaatgcccatttcgccgggagcgacgacggcactggccacacg
ctgatcacgatgaccgatgaccacgccccggccttcaccgccggcggcgtgctggcgggg
ggcgtctccgagcaggcggacgccaccggtgacttcgccacctccgatacctcaacgcct
gcgaccggcgcgattgacttcaccgacatcgacctgaccgacctgccgtcggcacagatc
accggccaggacgtgacctcgcttggcgccgatcacagcactaacctcacctcgtcgctc
tcgcttgacgagatcgcggcgctcaagagcgggctgacgcttctgccgcaggccgggctg
aacaatggcatcgtcacctggagctattcgatcgccgacggcgcgctggacttcctcgcc
aaggaccagaccgcgaaggtggtttctaccatcacgagcacggacgattacggcgagacc
gccacaaccgacgtcacggtcacgatcacaggcaagaacgacgcgccgaccttggccgcg
gtcaccacggatccgctcgtcgatacctccatcgccgacagcttctcggacgtcacggga
atgctggtcggaaccgacgccgaccatggagagacggcggggctgacctatgccgttctg
aacgcggatagtcatgggacgacggctggcctgtacggctcgctgacggtcaacgcgaac
ggcacctacacctacgttcccgatgcggcttcgatcaacgcgctttcggaaggcccttgt
tcggacgtcttcacgattcagaccacggacgcgcaaggtgctgtcggcacggcatcattc
acggttgccgtaacaggcgccaacgacgctccggtgttgaccgatggtagcatcgggcag
ctcaccgatacgtgcgcagcggataatttctctgacctcaccggacaggtggtcgggacc
gatgccgactccggcgatacgctgacctacaccttgctgaacgcagatcaccaggcagtc
ggagaggtcacgggtcactatggcgcgctggcgctcaacacgaacggcacctacacctac
gttcccgatgcggcttcgattaacgcgctgccgggctgcttgcactattccgacagtttc
acggtccaggtcacggatgcacatggcgccgcctccacggcgatatacacggtggacctg
acgggcgccaacgacgtgccaacgctgtccgctctcaacctcggcaagcttacggacacg
gcggcgaccgacaccttctccaatctcaccggaaatctcgcgggcaccgacgccgatgcc
gacgagacggtgacgctgacctattctgtccagaatgcggatagttgcgggacggctcca
ggacactacggcgcgctgacggtccactctgacggcagctacacctacgttcccgacgcg
gctgcgatcaacgcgttgcaagaagggcccttcgcggatacgtttacggtccagacgacg
gacgcgcatggcgcggccggcactgcgatactcacggtggacgtggacggcgcgaacgat
gcgccggtaatggacgtcaaccagatcagcctcacgcatgacggcgctcaagtcactgtg
cacggtatctcggccaccgactccgatgcggctgccaatgaaaccttcacgctcgttgct
tccggctcgggtagcaatttgagtccggcgtcgacgtcagataccttggcgcatatcaat
tccgcgctgcagaccgtgacctacactgatgcaagtgaaggtgcggccatacagacggtc
acgctcaccgtggccgacagtcacaacgcaagcaagacggttagcctgctctttggcacg
gccgggcaagatgacttcatcgggacaggccatcaggaccagttcgtgttcgccgccagt
tccaacaacgatacgatcaccaatttcacgcccggtcaggaccatatcgacttgtcggca
gtcgtgaccgccagcgattttggggcatggatggcgcagcacgtggcggcttcgccgacc
aattccgctgacaccctggtcacgatcaacgcttcggacaccatccttctgaagggtgtc
gcccacctccaggcgagcgacttcatcgtccatgcctga
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integrated database retrieval system
